Temnothorax longispinosus: 139815573
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Entry
139815573 CDS
T10889
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tln03009
]
139815573
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
90S particles
Other 90S particles
139815573
Pre-60S particles
Other pre-60S particles
139815573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_IMB1
DUF7623
SPT6_acidic
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
139815573
NCBI-ProteinID:
XP_071638677
LinkDB
All DBs
Position
7:complement(39210..44547)
Genome browser
AA seq
1342 aa
AA seq
DB search
MGKLAPRLASRKKAKRWARGQSSSSNPATTKYREQATGMFFKDLPGSGTSGITKEDLRKH
DAIQGIQPGFAKLDLDADREDREDGRTTITCDTFATTYSACSNLSFGRFLARFQSSSIVH
KEMLAVLAAVTEVIKQNGGNETSTEYFAALMSTLEAIEDDTSVAATLSLLGMCLRTVPRN
VLNLQFGPTSQALLRILERSAIVSENHLVLRHCIGCLSVLLRAQEAAVWIAPSTTQLLNA
ILSLVTHAKPKVRKSAQHGICAILRGSDVMRSEAPAPPTHHPAAGHIATHCVAQLDAACE
PGSSLGATTILHILTLLKDIMSQLPKSHVRTICERLLSIMTLNNVLITSCCLQTLHGLLV
ARPSEATLPFPQNASIIKALYAYQPSADDTQPTLAWLAVMREAHCNLVRLAVGTWASPQS
GTAVDVLATLHHLTPEMFDRCVGLLLSNRTEIVAGASHTVEAILRDGVARLCEDEERVGR
YEPILRRVVETLREALSYRYLGAWRHVLHLTAVLFEVAGKLAARAGRLEQLGNLVETLGT
LRDFHAFAYNREAEYAIGAAIRAMGPRLVLNILPLRTDENQPPAPCQQINLRRASWMIPL
LKDCVTTAGGTIALFKDVLLPIARHCEEKANETSSASTADGKTYECLVTQIWSILPSICN
DASDVKDNFKHVAKLLGIAINDRRDLRLPAMAALRKLIVKAAADDRAELARFAKNYLPIL
FNLYTTRPSGTDEEGVRLAAYDTIKTYVTIASSDLANELFDRALSKLDEPDADDFFKESV
YDLTRALIGYTDVDRLSKYYDACVPVLKNATKRKEQKKAYRFLEEICGSEREICERFLHE
HRRRIQKTLIASASSVVRTSRGARLRCLAHLVRRHPQLEGTKFLEAVVPEAVLCVKDINE
RCRDAAYQLLNAIAERFLNEPAHLKDYADMLMVGLSGERAYVSASLLALASVTYRHNDSL
GTEIVAEILGHACTILTSPTREIAESALSYVKVYLNVTPSDVIAPTLPRIVDALSRMTED
CKRHFRQKVRDIFTKLIRKYGFGPIASMVPASDVTLHKRLKNINKIEDAKRRKRELERAR
KLEQETADEDVDLVRRGPKSIEEILADSDEEFQATENEEEARRSKKRTPGKDAWIQETED
DIVDLADPAAARNITTTQPGVSNLKIPEKKVKDRGFATAPDGRLIIRDDNERDSDAEERT
KKKKRKTSFSQSDSEDDYKDEDDVSVVTTKTAGKKRKYSSSTLDAMSLKSRSTSRYRAGG
SGIHRPLKATKVDCEPGSEYRATKARGDIKRKGKPDPYAYVPLTRSILNKRKKKKNAGKF
QSIVSGTKKGARAGLRNKRRKR
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctggcgcctcgtttggcaagtagaaagaaggcaaagcgatgggcaagaggc
cagagttccagttccaatccggcgacgaccaagtatcgcgagcaagcgactggcatgttt
ttcaaggacctccccggctccggcacgtcaggtatcacgaaggaggacctacggaagcac
gacgccatccaaggtattcagcctgggttcgcgaagctcgacctggacgcggaccgagag
gaccgagaggatgggaggacgacgatcacgtgcgacacgttcgccaccacgtacagcgcg
tgctccaacctttccttcggcaggttcctcgcccgctttcaatcgagctcgatcgtccac
aaggagatgctggcggtgctcgcggccgtgacagaggtcatcaagcagaacggtggtaac
gagacttcgaccgagtactttgccgcgttgatgagcactttggaggcgatagaggacgac
acctccgtagccgcgaccctctcgctgctcgggatgtgtctgagaacggtgccgaggaac
gtcctcaacttgcaattcggcccgacgagtcaggccctcctgcggattctcgagcggtca
gcgatcgtaagcgagaaccatctcgttctgcgacattgcataggctgcctctcggtgttg
ctgagagcgcaggaggctgccgtttggatcgcgccctcgacgacgcagctgctcaacgct
atcctgtccttggtcacacacgccaagccgaaggtccgcaagtccgcccagcacgggata
tgcgccattctacggggcagcgacgtgatgaggagcgaggcgcccgcgccgccgactcac
catccggccgcgggacatatcgcgacgcactgcgtcgcgcagctcgacgccgcttgcgag
ccaggctcctcgctcggagccaccactattctgcatatcctcaccctgttgaaagatatt
atgtcgcagttgcccaagtcacacgtaaggaccatctgcgaacgtctgttgagcatcatg
acgttgaacaacgttctgataacgtcgtgctgcctgcaaacgctgcacgggctgttggtc
gcgaggccgtcggaggcgaccttacctttcccgcaaaacgcaagtatcattaaggccctt
tacgcgtatcagccgtccgcggacgacacgcagccgactttggcgtggttggccgtcatg
cgggaggctcactgcaacctggtgcgcctggccgtcgggacctgggcctccccgcagtcg
gggaccgcggtcgacgtcctcgcgacgctccatcaccttacgccggaaatgttcgacagg
tgcgtcgggctcttgctgtccaacaggacggagatcgtcgccggcgcgtcgcacaccgtc
gaggccattctacgggacggcgtggcacgcctgtgcgaggacgaggagcgagtcggcaga
tacgagcccatcctgaggcgcgtcgtcgagacgttgcgcgaggcgctgagctatcgctat
ctcggagcctggcgccacgtccttcatcttacagccgtactcttcgaagtcgccggtaag
ctcgccgcccgcgccggaagactcgagcaactcggcaacctcgtcgagaccctgggcacg
ctgcgagatttccacgcgttcgcgtacaaccgtgaggcggagtacgccatcggggcggcg
atccgggcgatggggcctcggctcgtgttgaacatcctccctcttcgaaccgacgaaaac
caaccaccagctccttgtcagcagataaatctcagacgcgcgagctggatgatcccgctg
ctcaaggattgcgtaacgacggccggtggcaccatcgccctcttcaaggacgtcttgctg
ccgatcgctcggcactgcgaggaaaaagcgaacgagacgagtagcgcgtctaccgcggac
ggaaagacgtacgagtgcttggtaacgcagatctggtccatcttgccgagcatatgcaac
gacgccagcgacgtcaaggacaactttaaacacgtcgccaagctgttgggtatagccatc
aacgaccggagggacctcaggctacccgcgatggcggccctgagaaaactgattgtcaag
gcggcggccgacgatcgcgccgagctcgctcgcttcgccaaaaactacctgccgatcctc
ttcaatctgtacaccacgagaccaagcggcacggacgaggagggagtgcgcctcgccgcg
tacgacacgatcaagacctacgtgacgatcgcgagcagcgacttggcgaacgagctgttc
gatcgagcgctgagcaagctcgacgagcccgacgcggatgacttcttcaaggagagcgtt
tacgatctgacgagagcgctgatcggctatacggacgtcgacaggctgagcaagtactac
gacgcgtgcgtgccggtcttgaagaacgcgaccaagcggaaggagcagaagaaggcttac
cgtttcctcgaggagatatgcggcagcgagagggagatctgcgagcggttcctgcacgag
caccggcgccggattcaaaagacgctgatcgcctcggcgagtagcgtcgtccggacgagt
agaggagcgcgtctgcggtgcctcgcgcatctcgtcagacgacacccgcagctcgagggg
accaagttcctcgaggccgtcgtgccggaagctgtgctctgcgtcaaggatataaacgag
aggtgtcgcgacgcggcgtatcagctgctcaacgcgatcgccgagagattcctcaacgag
cccgcgcacctcaaagactacgcggatatgctgatggtgggcctgagcggcgaacgagcc
tacgttagcgccagtctcctcgctctggcgtctgtcacctatcgtcacaacgactctctc
ggcacggagatcgtcgctgagatcctgggacacgcttgcaccattctgaccagtcctacg
agggagattgccgagtccgccttgtcctacgtcaaggtctacctcaacgtcacgccgtcc
gacgtgatagcgccgacgttgccgcggatagtcgacgctctgtcgcgaatgaccgaggac
tgtaagcgccactttcgacaaaaggtgcgagacatctttaccaaactgataaggaagtac
ggcttcggaccgatcgcgagcatggtgccagcctcggacgtgaccctgcataagagacta
aagaatatcaacaagatcgaagacgccaagaggaggaagcgggagctcgaaagagcgagg
aagctggagcaggagacggctgacgaggacgttgacctcgtcaggaggggacctaaaagt
atagaggagatattggccgacagcgacgaggagtttcaggctacggagaacgaagaagaa
gcgaggagaagcaagaaaagaaccccaggaaaggacgcttggattcaggaaaccgaagat
gatatagtcgatctcgcggatcccgcagctgctagaaatatcacaactacgcaaccgggt
gtgtcgaatctaaagattccagagaagaaggtaaaggatcgtggctttgcgactgcaccc
gatggtcgtctcatcattagggacgataacgagagagacagcgacgcggaggaaaggacg
aagaagaagaagagaaagacttctttctcccagagtgattcggaagacgattacaaagac
gaagatgatgtatcggtagtgaccacaaagaccgctggcaaaaaacgtaaatacagctca
agtacattggatgcgatgagcttaaagagtcggtcaacgtcgagatatcgagccggtgga
tcgggtattcatcgaccgctaaaagcgacgaaagtagactgtgaacccggttcggaatat
cgtgcgaccaaggccaggggagatattaagagaaagggtaaaccagatccctacgcatat
gtacccttgacgagatctatattgaacaaaagaaagaagaagaaaaatgcgggcaaattt
cagagtatagtttctgggacgaaaaagggcgcccgcgcaggtttacgcaataaacgaaga
aagcgttag
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