KEGG   Temnothorax longispinosus: 139815635
Entry
139815635         CDS       T10889                                 
Symbol
Col4a1
Name
(RefSeq) uncharacterized protein Col4a1
  KO
K06237  collagen type IV alpha
Organism
tln  Temnothorax longispinosus
Pathway
tln04382  Cornified envelope formation
tln04512  ECM-receptor interaction
tln04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tln00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139815635 (Col4a1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139815635 (Col4a1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    139815635 (Col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tln04147]
    139815635 (Col4a1)
   00536 Glycosaminoglycan binding proteins [BR:tln00536]
    139815635 (Col4a1)
Exosome [BR:tln04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   139815635 (Col4a1)
Glycosaminoglycan binding proteins [BR:tln00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   139815635 (Col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 139815635
NCBI-ProteinID: XP_071638769
LinkDB
Position
7:5374580..5398584
AA seq 1989 aa
MTRLGLRFVASAVFLAGIVNGQYNHTSWPNPPPVVPLEERGDIGKPTNGSDDDYGSSSGW
NLSRGFITDNEGYEDAERRNGSYTAGHYSPDERTRHWLYRNRSDPHGQFSSGRSPYDRAP
QGYDRYPDSGGASGYGIDENRPGGYPDGHGDYDTYSGAGESERGGGGGSYNYGQGGSSDG
GSYGGSHGAGGADSYGRGGGQAYSGGRGGGDAYGGGRGSGQVYGGGGRGSDDAYGGGRGR
GHGGYGGYAAAGADENYPSNYQVVPMPGAPRNCTGSGCCIPKCFAEKGSRGPPGIMGPQG
PKGFRGFPGAEGLLGPKGEKGDPGPQGPHGAKGDRGKMGMPGFPGINGVPGVQGSPGSPG
LPGRDGCNGTDGERGRDGIPGEPGPRGFKGLPGPKGDKGQSAYAGSFPQGQKGEPGNDGV
RGPPGPPGFQGDRGPSGPKGERGPYGAPGIPGPKGEKGNMGLGFEGLKGDKGQKGDAGPP
GSTAPIMPFQGVSDITGPPGDTGQKGDKGEIGLEGLKGEPGFIGDHGIPGGSGHKGEKGL
PGAPGIRGRDGFSGPPGPPGRKGDRGIDGLEGLSGRHGKKGESGRDGPMGVPGLRGPPGP
PGGGKGRPGPPGPKGPRGFPGPTGPRGTDGFPGDPGPRGPIGLQGGPGLSGIPGPEGLPG
EKGGKGEPGLTGFPGGPGPRGFDGPPGPAGPRGPPGEKGLSIMGPKGMDGSPGFDGEKGQ
KGERGYVGVRGRPGDSLDGIPGAPGAPGEKGEAGTSGRDGLPGLPGNPGDKGDIGGRCID
CLPGLRGAKGDRGLDGIPGLTGPRGPPGERGFPGEPGVDGLPGPIGPPGLPGKDGIPGSP
GPQGSPGTPATVTWGMLKLEKGDKGARGESGRQGPPGPEGPPGEKGRPGFEGFPGLKGTP
GDRGFPGQDGVPGRPGTPGRKGDKGISVKGESGEPGRPGSSGQKGEPGLYGVKGEPGECP
PLDLMKGFKGDRGLTGDKGEPGPPGRDGLPGDKGLQGFSGPPGPIGPIGAPGPVGPRGLP
GPRGDKGNMGPMGFPGELGREGPRGFPGAPAPKGDKGEPGISVKGSPGLPGPPGERGEKG
LPGPPGKEGQPGYQGLPGFAGEKGDIGAPGINGLPGAPGEKGDTGPNGPPGPPGVAGIPG
SDGIKGEPGLTGEPGRAGLPGFPGTKGDRGEPGIDGSKGYPGRRGLPGGPGRPGADGLTG
IKGEHGDKGSPGFPGLPGMEGKPGRPGISGLKGDLGPPGTPGLPGLIGYQGVKGDTGPPG
PTGRKGEPGEVSEKGQKGEPGMPGIRGPTGPPGRDGVDGAKGESGRPGIGRDGLPGLKGD
AGVPGRHGAPGFQGQKGDTGVRGFPGIKGDYGPPGISGEPGPPGIDGLPGEVGDVGPQGA
PGFPGLDGEMGAPGRPGLDGVKGDRGLSGLVGLPGIPGALGEKGDRGPPGPTIQIKGEKG
EPGIPGYSGDKGDKGDQGLIGIAGYDGEKGDRGPIGSEGAPGPHGAPGAKGELGPPGIAG
VPGVTIKGEKGLPGLMGKHGRDGFSGRPGEKGEPGLPGLPGPKGDIGPYGPVGPQGEKGD
QGPPGLTGSPGRDGVPGLEGAPGLSGDRGQKGDQGPPGQFGVPGLKGEPGFPGPSGLDGP
QGEKGERGWDGVNGLPGPLGEKGDRGYPGQVGLMGTVGYIGAKGEKGEDCLEPPMGPKGD
RGYPGPAGAPGPSGEKGLPGPPGFPGLDGIKGAQGFIGPAGPPGLPGLPGPVGVPGLPGL
QGPVGAPGLTGEPGAPCETTPDYLTGILLVKHSQSQSIPICEPGHIRLWEGYSLLYTDGD
ERAHSQDLGYAGSCVRKFSTIPFLFCDVNNVCHYASRNDRSYWLSTNSPIPMMPVEERAI
EEYISRCVVCEVPANVIAVHSQSISIPECPAGWTGLWIGYSFVMHTGAGSQGGGQSLSSP
GSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIEEGQQFRSPEKQTLKAGNLRSRIS
RCQVCIKNT
NT seq 5970 nt   +upstreamnt  +downstreamnt
atgacccggttgggattgcgattcgtcgcatccgcagttttcctggccgggattgttaat
gggcaatataatcacacatcatggccgaatccgccgccggtcgtgccgctggaggagcga
ggtgatattggaaagcctacaaacggcagcgatgacgactacggcagttcgtccggatgg
aatttaagcagagggttcatcacggacaacgaaggatacgaggatgcggaaaggcggaac
ggcagttacacggctggtcattacagtcccgatgaaaggactcggcactggctctatagg
aacaggagcgatccccacggtcaattttcctcgggccgatcgccttacgatcgggcaccg
cagggctacgacaggtatcctgacagcggcggcgcgtcgggatacggaattgacgaaaac
cgaccaggcggctatcccgatggccacggcgattacgatacatacagcggtgccggtgaa
agcgaacgaggaggaggaggaggttcgtataattacggtcaaggaggttccagtgatggt
ggtagttacggaggaagtcatggtgcgggaggtgcggattcctacggtcgtggaggtggg
caagcttacagtggcggtcgtggaggcggagacgcttatggcggcggtcgcggaagtgga
caagtttacggcggcggcggtcgtggaagcgatgacgcttatggtggcggtcgtgggcgt
ggtcatggtggttacgggggttacgctgccgctggagctgacgagaattatccgagcaat
taccaagtggtaccgatgcccggagcaccgcgaaactgtaccggatcaggatgctgcata
cccaaatgcttcgccgagaagggctcgcggggaccaccaggaataatgggaccacaaggt
cctaaaggatttcgtggatttcctggagcagaaggtcttctaggacccaaaggtgagaag
ggagatcccggtccgcaaggtccgcacggtgcgaaaggtgacagaggaaaaatgggtatg
cctggttttcctggtataaacggcgtgcctggagtacaaggatctccaggttctccaggc
ttgcccggtcgtgacggctgcaacggcacggacggtgaacgtgggcgtgatggtataccc
ggagaaccaggacctcgcggttttaagggtctgcctgggcctaaaggagacaagggccag
tcagcgtacgctggttctttcccgcagggtcaaaagggtgaacctggtaacgacggtgtg
agaggccctcccggtccccccggttttcagggagaccgtggcccgtctggcccgaagggt
gaacgaggtccctacggtgcccctggcataccaggtccgaaaggagaaaaaggaaacatg
ggtcttggatttgaaggattaaagggagacaaaggtcagaagggcgatgcgggacctcca
ggttcgacagcgcctattatgccgtttcaaggagtctcggacataacgggtccgcccgga
gacacaggccaaaaaggagataaaggtgaaattggattggaaggattaaaaggagaacct
ggattcataggcgatcatggcatacccggagggtcaggtcataaaggagaaaaaggtctt
ccaggagctccaggcattcgtggtagagatggtttctctggacctcctggacctcctgga
cgaaaaggtgatcgaggtattgacggattggaaggacttagtggacgacacggcaagaaa
ggagaatccggtcgagatggaccgatgggtgttccaggtttacgaggacctcctggtcca
ccaggaggtggtaaaggaagaccgggaccaccaggcccgaaaggaccacgtggttttcca
ggacctaccgggccacgaggaacagacggttttccaggagacccaggaccaagaggtccc
ataggtttacaaggaggtcccggattgtctggaattccaggtccagaaggtttgccagga
gaaaaaggtggaaagggcgagcctggtttgaccggatttcctggaggtccaggtccacgt
ggcttcgatggaccacccggaccggcgggaccgcgagggccgccaggagagaaaggactc
tcaataatgggaccgaaaggaatggatggatcgcctggtttcgacggagagaaaggtcaa
aagggcgaacgaggttacgtgggtgtccgaggtcgaccaggagactctctagatggtatt
ccaggagcaccgggtgcacccggtgagaagggagaagccggaacgtcaggaagagacggc
ttaccaggtcttcctggaaatcctggagacaaaggagatatcggcggtcgttgtatagat
tgtttaccgggattgcgaggcgccaaaggagatcgtggtttggatggtatacccggactt
accggacctcgaggaccacccggagaacgcggtttccctggggaacctggagtggatggt
ttgccaggcccaatcggacctccgggactgccaggaaaagatggtatacccggttctcca
ggacctcaaggatcacccggaaccccagcaacagtgacatggggtatgctcaaactggaa
aaaggtgataaaggagcgcgaggagagtctggtcgacaaggtccgccgggaccagaaggg
cctccgggagagaagggtagacctggattcgaaggttttccagggcttaaaggaactcca
ggagatcgcggtttccctggacaagatggcgttccaggaagaccaggtacgcctggacgc
aagggagataagggaataagtgtaaaaggtgaatccggagaaccaggtcgtccaggatct
tcaggacagaaaggagagcctggtttgtacggagttaagggtgaacctggtgaatgtccg
ccacttgaccttatgaaaggcttcaaaggtgatcgaggtttaactggtgacaagggagaa
cctggaccacctggcagggatggattacctggtgataaaggattgcaaggcttctcgggt
ccacccggtccaattggcccaatcggtgctcctgggcctgtcggtccaagaggtttacct
ggtccgcgtggtgataagggtaacatgggtcctatgggtttcccaggagaacttggtcga
gaaggacctagaggtttcccgggtgcaccggctccaaagggtgacaagggagaacctgga
atatcagttaaaggtagtcctggtctaccgggtcctccgggtgaaaggggagagaaaggt
cttcctggaccaccaggaaaagaaggtcagcctggttaccagggattaccaggtttcgct
ggcgagaaaggagacattggcgcaccgggaatcaatggtttgccaggagcacctggtgag
aaaggagatacaggtccaaatggtccacctggtcctccaggtgttgccggtattccagga
tcggatggaatcaaaggcgagcccggattaacaggagagccaggtagagcgggtctccct
ggattcccgggaacgaaaggtgatcgcggtgaaccaggtatcgatggatcaaaaggatat
cccggcagacgaggattacctggtggtccaggtagacctggagctgatggcttgacaggt
ataaagggtgaacacggtgacaaaggttcgccaggattccccggattaccaggtatggaa
ggaaagcctggtcgtcctggaatatccgggctgaaaggtgatctaggaccacctggtacg
cctggcttaccaggactcatcggttatcaaggagttaagggcgatactggtccaccgggc
ccaacgggaaggaaaggagagccaggagaggtatcggaaaaaggacagaaaggcgagcca
ggaatgcctggaatacgaggtcctacaggtcctccgggacgagatggtgtcgatggagcg
aagggcgaatctggcagaccaggcattgggcgtgacggattacctggattaaagggtgac
gcgggtgtaccgggtcggcatggagcgccaggattccaaggtcaaaaaggtgatactggc
gtacgaggattccctggaataaaaggcgattacggtccaccgggtatatccggagaacca
ggtccgcctggcatagatggacttcctggagaagttggcgatgtcgggccacagggagca
cctggttttcctggacttgatggcgaaatgggcgctcctggtcggcctggactcgatggt
gttaaaggcgaccgcggtttgtcaggactcgtcggattgccgggtattcctggagcactt
ggagaaaagggagatcgtggacctccgggacctacaatccaaattaagggcgagaaaggt
gaaccaggtattcctggatactctggagacaaaggagacaaaggagatcaaggtctgata
ggtatcgctggttatgatggcgaaaagggtgacagaggtccaattggatccgaaggtgct
cctggacctcatggtgctcccggagctaaaggcgaactaggacctcctggtattgctgga
gttcccggagttacgataaagggcgaaaaaggtttgccaggtttaatgggtaagcacggc
agagacggattttcaggacggccaggtgagaagggtgaaccgggattgcctggtttgcct
ggaccaaagggagacattggtccttacgggccagttggaccacaaggtgaaaaaggcgat
caaggaccaccgggtctaactggatcaccaggacgtgacggagttccaggtctcgaaggt
gcaccaggattatctggtgacagaggtcaaaagggtgatcaagggccgcctggacaattc
ggtgtcccaggattgaagggagaacccggtttcccaggaccaagtggattagatggacct
caaggagaaaagggtgaaagaggttgggatggtgtaaatggtctacctggaccactaggc
gagaaaggtgatagaggatatcctggtcaagtcggattaatgggtactgttggctacata
ggtgcgaaaggagaaaagggtgaagattgtctcgagccgccaatgggacctaaaggagat
cgcggataccctggaccggccggagcgcctggtccatcaggagagaaaggacttccgggc
ccgcccggtttccccggcttagacggtattaaaggcgcccaaggtttcatcggtccagca
gggcctcccgggctaccgggattgcccggacctgtcggtgtacccggtctaccgggtctt
caaggtcctgtcggtgcgccaggacttactggcgagcccggcgcgccctgcgagacgaca
cccgactatctcaccggtattcttctggtcaagcacagccaaagtcaaagcatcccgatt
tgcgagcccggtcatattagactctgggagggatacagtttgctttacactgacggcgac
gagagagcgcactctcaggacttaggttatgccggctcgtgtgtaagaaaattctcgacg
atacctttcctgttttgcgacgtcaacaacgtctgccattacgctagtcgcaatgatcgt
tcttactggctgtctaccaatagcccaattcccatgatgcccgtcgaggagagggcgata
gaagaatatatctccagatgcgtggtgtgcgaagttccggctaatgtgatagcagtacac
agtcaatcgataagcattccagaatgtccggcgggatggaccggtctttggatcggttat
agttttgtaatgcataccggcgcaggttcccagggcggcggccagtccctgtcgagtccc
ggttcctgcctggaggacttccgcgccacaccgttcatcgagtgcaacggcgccaaagga
cactgccattactattctaatcagtacagcttctggatggtgaccatagaggaaggccag
cagttcaggagccccgagaaacagaccctaaaggcgggcaatcttagatcccgaataagt
cgctgccaagtttgtataaagaacacgtaa

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