Temnothorax longispinosus: 139815636
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Entry
139815636 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06237
collagen type IV alpha
Organism
tln Temnothorax longispinosus
Pathway
tln04382
Cornified envelope formation
tln04512
ECM-receptor interaction
tln04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139815636
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139815636
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139815636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tln04147
]
139815636
00536 Glycosaminoglycan binding proteins [BR:
tln00536
]
139815636
Exosome [BR:
tln04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139815636
Glycosaminoglycan binding proteins [BR:
tln00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139815636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139815636
NCBI-ProteinID:
XP_071638770
LinkDB
All DBs
Position
7:complement(5317615..5373927)
Genome browser
AA seq
1848 aa
AA seq
DB search
MRPRAAATSGIIGDASRGISRPVPLVLRITCVLALLVHAATWIPIAEAVICKDSYKCNCK
GIKGQPGFPGIPGPEGTEGLPGDIGPDGPPGPKGEKGAGGEVGGTGEKGYRGDDGIQGFV
GVAGLSGNSGIPGVMGPDGLDGCNGTDGRAGAPGIPGTYGPRGPPGPLGDYGFTGEPGDG
GINSVGVKGERGQPGIDGLEGYRGPQGLTGEMGYPGDTGDFGLPGSPGLPGMQGERGDTV
YGVKGQLGEQGDRGEPGAPGKDEYKKPENSTATKGPQGPKGMKGTYGDRGRKGELGARGP
QGRPGFLGIKGVKGEQGDDGPRGKQGVDGPPGPAGEKGEKGAPGFAGLPGRDGDDGEPGE
EGNRGPPGRQGAEGEPGRYIPELDEIIAGNIGIQGDLGPPGEPGESGIPGLQGKVGFIGP
PGPPGPPGTPGLAGAKGSSIKGEQGDDGLPGPMGPQGSSGLPGLPGILGAKGFPGVTITG
PSGPDGQPGFPGLLGPPGDRGDPGPPGEKGFPGKGIRIRGPDGERGLPGIPGISGPDGWP
GFAGSKGTKGIRGDDCGVCAPGLLGDKGERGESGLDGYPGASGFPGLPGPRGFKGIQGKR
GPQGPAGLEGDNGRPGIAGVEGPKGEQGRIFFPPGEKVVSPPGDIGEKGMPGPEGIRGIR
GQPGPIGDTGVPGPKGDKGEHGLPGLSGRDGSPGWDGIPGEKGEDASIPIEFLRGDPGYP
GQPGIKGIQGDKGNKGEPGTSAEYITDVQGDKGYKGVRGEPGEFGFKGFQGRPGDEGLPG
LPGEPGSPGLSLQGAIGLKGYPGMPGDQGPRGTSGSPGSQGPVGFPGRVGNKGERGDPGS
NLTYGEIGERGWYGPKGDIGDPGPQGLPGRPGEDGLKGVKGAKGAFGYEGLPGLQGAKGQ
RGDSIQGDRGFPGIPGQPGMPGRIGDVGSRGPDGPSGFDGMKGLKGEIGFIGRRGDDGDA
GPQGYQGMHGRQGLPGAPGEKGDVGESGDPGPRGWPGFDGIDGISGPKGEIGDAGAPGFP
GVTGPPGFKGITGDAGLEGLAGIPGENSFSGPQGDVGEPGFMGELGPPGLAGFDGRPGLP
GEPGLSTDGFNGLPGQKGEPGLDGYPGVGGSKGEIGDMGPDGLKGERGEQGFPGRPGAPG
IPGRYGVKGERGPIGPSGFDGLKGKPGLDGDPGIMGRPGMPGEPGVRGTPGIMGAPGPKG
YVGEPGLPSYAFAMKGDSGNRGHDGFAGMKGQLGEPGYNGVGGRKGQIGDKGYPGPVGFQ
GLPGFPGLPGDQGPRGAPGLPGEFAEPGEPGRAGLDGRPGIPGRPGQKGAPGEYGPNGPK
GISGDIGHSLRGHKGIVGEPGLRGFVGQPGMPGLEGLQGFPGAPGPKGYRGEPGISAGSR
KGQPGEPGLPGFDGRVGPKGLKGDSGLAGFDGLPGPKGERGDTGEPGLRGLPGPEGPQGP
KGDPGMNPFPPFPRRGLPGDTGVPGLPGFPGLQGMMGEPGKDGLPGRQGETGMIGISGPQ
GPDGKDGPSGYQGPPGATGRQGQPGFRGAPGIPAANGIGPRDRGFYFARHSQTEMIPTCP
RNTVKIWEGFSLLHTMGNGRPYAQDLGAAGSCIKKFSTMPFLFCNLNNVCDYANRNDYSY
WLSTTEPMPMMMTPIPAPEVGRYISRCSVCEAPTRVIAVHSQSMAIPECPGGWEEIWVGY
SFLMHRDAGADGGGQSLVSPGSCLEEFRVRPFIECRGLGSCNYFATATSYWLATIHDEDM
FRKPLQQTLKADHTSRVSRCAVCLRRRVTEVLKPFTSNNERAPNNWGVAPPAPPPPPRNL
PDYESSRVPPSRGRYPNRERQRVPYQYRRRGRVRGKQWERSTESPNNL
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccagggccgcggcgacgtcaggaatcatcggcgacgcgagccgcggcatctcg
cggccggtcccgctcgtcctgcgaatcacctgcgtccttgccctactggtgcacgccgcc
acgtggataccgatcgccgaggctgtgatctgcaaagactcgtacaaatgcaattgtaag
ggaataaaaggacaaccgggatttcctggaatacctggacccgaaggaacggagggactt
ccaggcgacattggacccgatggaccccccggacccaaaggcgagaaaggagcgggagga
gaagttggaggcaccggggagaagggctaccgaggcgatgatggtatacaaggatttgtg
ggagtcgcaggactttccggcaattccggcatacccggtgtgatgggtccagacggactg
gacggatgcaacggaaccgacggtcgtgctggtgcacccggtatacccggaacttacggc
ccacgtggtccaccaggacccttaggcgattatggttttacgggagagcctggtgatgga
ggtataaattcggtcggtgtcaaaggagaacgcgggcagcccggtatcgacggactggag
ggttatcgaggaccgcagggactcaccggcgagatgggttatccaggagacacgggcgac
tttggtttgccaggttctcctggcttgccaggtatgcaaggtgagcgcggcgacaccgtg
tacggtgtgaagggtcaacttggcgagcagggagacaggggagagcctggagcaccgggt
aaggacgaatataagaaaccggaaaactcgacggccaccaaaggaccgcaggggccaaaa
ggcatgaagggcacctatggtgatcgaggtcgcaagggagagctgggcgccaggggtcca
caaggtcgaccaggtttcttgggtatcaaaggtgtgaaaggtgaacaaggtgacgatggg
ccgagaggtaaacagggtgtcgacggcccaccgggcccagctggtgagaagggagaaaaa
ggagctccaggattcgctggattgcctggtcgggatggagatgatggagagccaggagaa
gagggaaatcgcggtccacctggtagacagggagctgagggagaacctggacgatacatt
ccagaacttgatgagataattgccggaaatatcgggatccaaggagatcttggcccgcct
ggtgaaccaggcgaatcgggaataccgggtctgcaaggaaaagtcggatttatagggccg
ccaggaccaccagggcctccgggtactcctggtctggcgggagcgaagggctcatccata
aaaggagaacaaggagatgatggcttaccaggacctatgggacctcaaggatcttccgga
ttacccggtttacccggaattctgggggccaaaggattcccgggggtaacgataactgga
ccgtcgggaccagacggtcaaccaggttttccaggattgttgggcccacctggcgatcgc
ggtgatcctggtcctccaggagagaaaggttttcctggaaaaggaataagaattcgtggg
ccagacggagaacggggtctacccggaatacctggtatttctggtcccgacggctggcct
ggctttgctggctctaaaggtaccaagggtattcgaggagacgattgcggcgtatgtgcc
ccaggtctgctcggggacaagggagaacgcggtgagtctggtttggacggatatccggga
gcttcgggattccctggtctacccggtccacgaggattcaagggaatacaaggaaagaga
ggtccgcaaggaccggcggggcttgaaggtgataacggaagacctggtattgcgggagtt
gaaggacccaaaggagaacagggaagaatatttttcccgcctggcgagaaagtcgtgagt
ccgccgggcgatatcggtgagaaaggcatgcctgggcctgagggaatcagaggtatacgg
ggacaaccggggcccattggtgacacaggcgtaccgggaccaaaaggagacaagggtgaa
catggtcttccgggattgtcgggaagagacggctcgccaggatgggatggcattcctggc
gagaaaggtgaggacgcctcgataccaattgagttcttgcgcggagatccaggatatccg
ggacaaccgggaatcaaaggaattcaaggagataagggtaacaaaggagaacctggtaca
tccgcggaatacatcacagatgtacagggtgacaagggttacaaaggtgtcagaggagag
cccggtgaatttggtttcaaaggtttccaaggacgtcctggcgacgaaggtctaccagga
ttgcctggtgaacctggttctccaggactttcgcttcaaggtgctatcggtttgaaagga
tatcctggcatgccaggagaccagggacctcgaggcacatcaggctcacctggatcacag
gggccagtaggtttcccgggtcgcgtcggcaacaaaggtgaacgaggagatccgggctca
aacttaacatatggcgaaattggagaacgcggatggtacggtccaaagggtgacatcggt
gatcctggtccacaaggattgcccggccgaccgggagaggacggtttgaaaggcgtcaaa
ggagctaaaggagcgttcggttacgaaggattgcctggacttcaaggagccaaaggtcaa
cgtggagacagtatacaaggtgatcgcggatttccgggaatacctggccagcctggaatg
cccggaagaatcggagacgtcggaagccgcggccctgacggtccttccggctttgacgga
atgaagggcttgaaaggagaaatcggttttatcggacgacgtggtgacgacggcgacgcg
ggacctcagggataccaagggatgcacggtaggcaaggactaccgggtgctccaggagaa
aagggagacgtcggcgagagtggcgatccgggaccacgcggttggcccggtttcgacggt
atagacggaatatccggtcctaaaggagagatcggagacgcgggagcccccggtttcccg
ggagtgacagggccacctggattcaaaggtatcaccggtgatgccggtctcgaaggatta
gcggggatccctggcgaaaactccttcagcggtcctcaaggtgacgtgggtgaacctggt
tttatgggagagctcggaccgcccggtctggctggattcgacggacggcccggtttaccg
ggagaaccgggattgtccactgacggtttcaatggcctgccagggcagaaaggtgaaccc
ggattggacggataccctggtgtcggaggatcaaagggggaaattggtgacatgggtcct
gatggattaaaaggcgaacgaggtgagcaaggtttcccggggagaccaggtgcacccgga
atacccggtagatacggtgtgaaaggtgaaagaggcccaattggaccatccggatttgac
ggtttgaaaggaaagcctggcctcgacggtgatccgggcataatgggcagaccaggaatg
ccgggtgagccaggtgtgaggggaaccccgggtattatgggtgctcccggaccgaagggc
tacgtaggcgaacctggtttaccatcttacgcgttcgcgatgaagggtgattctggtaat
cgtggccatgatggtttcgccggtatgaaaggacaattaggtgaaccaggatataacggc
gtgggcggtcgtaagggtcaaataggagacaaaggatatccgggtccggtcggtttccaa
ggattacccggttttcctggtctgccgggtgatcaaggacctcgcggagctccaggatta
cctggtgaattcgctgaacctggtgagcctggtcgcgctggtctcgatggtaggcctggt
attccaggacgtccaggacaaaagggagctcctggtgaatatggcccgaacggacctaaa
ggaatctctggcgatataggccacagccttcgcggtcataaaggaatagtcggagaacca
ggtctgcgaggattcgtcggccaaccgggtatgccaggtttggaaggattgcaaggtttt
cccggagcacctgggccgaagggttaccgcggagaaccaggaatatctgcgggcagtagg
aaaggacaacccggcgaacctggattgcccggatttgatggtcgagttggaccgaaggga
ctgaaaggtgactctggtctggctggttttgacggattgccaggaccgaaaggagaaagg
ggagatacgggtgaacctggtctacgtgggctgcctgggcctgaaggaccacagggaccg
aaaggagaccctggcatgaatcctttcccgccattcccgagacgaggactccccggtgat
acaggagtacccggattaccaggtttccctggactgcagggaatgatgggtgagcctggc
aaggacggcttaccgggacgacagggtgaaacaggtatgattggaatttctggaccgcaa
ggaccagatggtaaagatggaccttccggatatcaagggcctcccggagcaaccggacga
caaggacaaccaggtttccgtggcgctcctggaatacctgcagcaaatggaattggtccg
agagacagaggattctactttgctcgtcactcgcaaaccgagatgataccgacctgtcca
aggaataccgtgaaaatctgggaaggattttcgctgttacacacgatgggtaatggacga
ccctacgcacaggatcttggcgctgctggcagttgcattaagaagttctccactatgccc
ttcctgttctgcaatctgaacaacgtgtgcgattatgccaatcgtaacgactacagttac
tggctcagcacaaccgagcctatgccgatgatgatgacaccaataccagctccggaagtt
ggtagatacatatcgagatgttccgtgtgcgaagcgccgactagggtaatagctgttcac
agtcaatccatggcaatacccgagtgtccgggtggctgggaggaaatctgggttggatac
agtttcctcatgcatagagatgcaggcgcggatggtggcggccagtctttagtctcgcct
ggctcctgcttggaggagttccgcgttaggccgtttatcgagtgccgcggcctcggctct
tgcaactacttcgccacggcgacatcgtactggctggcgaccattcacgacgaagacatg
ttccgcaagccgctgcagcaaacgctcaaagccgaccatacgtcccgagtgagtcgatgc
gccgtatgcctccgtcgacgggtcaccgaggtcctgaaacccttcacgtccaacaacgag
cgagcccccaataattggggcgttgctccgccggcaccgccaccgccaccccgcaatcta
cccgactacgagtcctccagggtaccgcccagccggggaagatatcccaacagagagagg
caacgcgtaccctatcagtaccgcaggagaggccgcgtgcgcggcaaacagtgggaacga
tcgacggagtctcccaacaatttgtag
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