Temnothorax longispinosus: 139815857
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Entry
139815857 CDS
T10889
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139815857
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139815857
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139815857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
Cas3-like_C_2
LBD_receptor
Motif
Other DBs
NCBI-GeneID:
139815857
NCBI-ProteinID:
XP_071639174
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All DBs
Position
7:complement(1804420..1810168)
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AA seq
579 aa
AA seq
DB search
MGRYRSRSRDRDRRRRSRTRSRSRSPRDRRSWGGSGGRDRPSSSRNSRGQPGANLRKPRW
DLSRLEPFKKDFYIPHDAVQNRDPRVVEQYRAEKEITLRGKNIPNPVFDFDEAGFPDYVL
REIKRQGFSEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLSRKD
GPIALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGGQARDLDGGVEIVIATPG
RLLDFLESGKTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEV
KNLAEDFLKDYAQINVGSLQLSANHNILQIIDVCQDYEKETKLSTLLKEIMAESENKTIV
FIETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLD
VEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNANKANDLIQVLKEANQV
INPKLLELADNKSGGYGRNRGGRNRWRSRGGGGGGGGGGGGGGRNGKERSYSRSRSRSYS
RERNGRSSRRSYSRSYSRSRSPVSNRNEVIGKSYWSSER
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctacagaagtcgtagtcgcgacagagacaggcgacgcagatcacgcacccgt
tcgcggagtagatctccgcgcgacaggcggagctggggtggcagtggaggacgtgacaga
ccgtccagcagtcgcaacagtcgcgggcaaccgggagcaaatctgaggaaaccgcgatgg
gacctcagccggctggaacccttcaagaaggacttctatattcctcacgacgcggtgcag
aatcgagatccgcgtgtcgtggagcaatacagagccgagaaggagatcactcttcgaggc
aagaatatcccgaatcctgtctttgacttcgacgaggcaggttttccagactacgtccta
agagagatcaagagacaaggcttcagcgaacccacatcgatccaagcgcaaggatggcct
atcgcgctgagcggtcgagatatggtgggcatcgcgtccacgggatctgggaaaacgtta
tcttacatactgcctgcgatagttcacatcaatagccagccgaaattaagtcgcaaagac
ggacctatcgcgttagtcctggcgcctacgcgagagctcgcccaacagattcagcaggtt
gccgatgattttggacattcgtcgggcatcaggaacacctgcctgtacggcggcgcgcca
aaaggcggtcaggcccgggatctggacggcggtgtagaaatagtcatcgctacgcccggt
agattactcgattttctcgagtccgggaagacaaatctgaagagatgtacatatttggtg
ttggacgaagccgacaggatgttggacatgggatttgagccgcaaatcagaaagatcata
gaacaaattagaccagacaggcagacgctgatgtggtcagccacgtggcctaaggaagta
aaaaatttagccgaagattttcttaaagattacgctcaaatcaatgttggttctttgcaa
ctttcagcaaatcataatatactgcaaataattgacgtgtgtcaggactatgaaaaagag
actaaattaagtaccctactgaaagagataatggcagaaagtgagaacaagaccatagtg
tttattgaaacgaagcgcagagtggacgagataacgaggaaaatgaaacgcgacggttgg
ccagcggtttgcatacacggcgacaagacacagcaagaacgagattgggttttacaagat
ttcagatcaggcaaagcaccaatcctcgttgctacagacgttgccgcacgcggtcttgac
gttgaagacgtcaagtttgtcatcaattttgactacccctcctgttccgaggattacgtc
catcgtatcggccgtaccggtcgccgacaaaagaccggcacggcgtataccttcttcacg
cctaacaacgccaacaaggccaacgatctgatacaggtgctgaaagaagcgaatcaagtg
ataaacccaaaactgctggagctcgccgacaataaatctggcggttatggcagaaacaga
ggtggaagaaatcgatggcgatcgcgaggcggtggtggaggaggaggtgggggtggtggt
ggtggaggccgtaatggaaaagagcgcagctactcgcgaagcagaagtcgaagctacagc
agagaacgcaacggccgcagcagtcgacgaagctacagccgcagctactcgcggagtcgt
agccccgtcagcaatcgtaatgaagttatcggcaagagttattggagtagcgagagatga
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