Temnothorax longispinosus: 139815881
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Entry
139815881 CDS
T10889
Symbol
Soxn
Name
(RefSeq) uncharacterized protein Soxn isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tln03000
]
139815881 (Soxn)
Transcription factors [BR:
tln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139815881 (Soxn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
DDHD
Motif
Other DBs
NCBI-GeneID:
139815881
NCBI-ProteinID:
XP_071639225
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Position
7:complement(18814085..19095069)
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AA seq
514 aa
AA seq
DB search
MHTMETDMKGGNLHAQMPPHPHQGVSPMGHHTGMSPYGSLGSIVHSSALSGSPPSAGSLG
LGLQHHHQTPQHHYHTTSMQVAAAAAAAAQQQQQQQQSMHAMAAQQSAQQQQHHPHQQQQ
QQQSQTQHHQANNHSNPNNPNNPSNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDK
FQLGGGVAGVGGMLGVDQRQVGTSGGPQQQLPRDVYQIPPTGYMPNGYMMHASHDPAAYQ
PHVAYSNHMGGAAAVAASAAAAYQRYDSMGHHMGGNSPSPINSYMNGYGGYGGTVPGGSP
SPYHQAQPGSQMSSHSPSGSSIKSEPTSPASGGGIHTPTPTGAAGPAGQVVKREYIGQPQ
TNQQSEAQIKQMISMYLPQGVEQGVVQHGGGVYSPGPSPDSLQHHAAMQPITHMSDSDRK
MLNPETGCYSESVRAWYQWLEKAHYVTLRRDSES
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggcggcaacctgcacgcccagatgccaccgcat
ccgcaccagggtgtatcgccgatgggccatcacacggggatgtcaccttacggatctcta
ggatcgatcgttcacagctccgcgctatcaggcagcccgcccagcgcgggcagcttaggc
cttggtcttcagcatcatcatcaaactcctcaacatcactaccatacaacaagcatgcag
gtggccgccgccgccgccgccgccgctcagcagcagcaacaacagcaacagagcatgcac
gcaatggcggcccagcagagcgctcagcaacagcagcatcatcctcatcagcagcaacag
caacaacaatcgcaaacgcagcaccaccaggccaacaatcatagcaatccgaataatcct
aacaatcctagcaattcctccaacgccaagaataacaatatggatcgtgtgaagaggccg
atgaatgccttcatggtatggtcgcgtggacaacggcgcaagatggcccaagaaaatccg
aagatgcataattctgagatatcgaaacgcctcggtgccgagtggaagcttctcagcgag
gcggagaagcgcccgttcatcgacgaggcgaaacggctgcgcgccgtgcatatgaaggag
caccccgattacaagtatcggccgcgtcgcaagacaaagacgctgataaagaaagacaag
ttccagttgggcggaggtgttgccggcgtcggcggtatgctcggcgtcgatcaacggcaa
gtgggcaccagcggcggaccgcagcagcaattaccgcgcgatgtatatcagatacctcct
accggctacatgcccaacggttatatgatgcatgcgtcgcatgatccggcggcgtatcag
ccacatgtcgcgtacagcaatcacatgggtggtgccgcagcggtcgccgcttcggcggcc
gcggcctaccagaggtacgattccatgggccatcacatgggcggcaacagtcctagccct
atcaacagctacatgaacggttacggcggatacggcggcaccgtgcccggcggctcaccg
tcaccttatcaccaggctcaaccgggttctcagatgtccagtcatagtcctagtggcagc
agcataaagtcagagccgacgagcccggcgagcggcggcggcatacacacgccgacgccg
acgggcgcggctggtcccgctggccaggtcgtgaagcgggaatacataggacagccgcag
acgaatcaacagagcgaagcacagatcaagcagatgatatcgatgtacctgccacaggga
gtcgagcagggagtcgtgcaacacggtggcggcgtctactcaccgggtccgtcgcctgat
tctttgcagcaccatgcggctatgcagccgattacacacatgtcagatagcgatcgtaaa
atgttgaacccggaaaccggttgctactccgaatccgtacgagcatggtatcagtggctg
gagaaagcacattacgtgacgctgagacgtgactcggaatcgtga
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