Temnothorax longispinosus: 139816248
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Entry
139816248 CDS
T10889
Symbol
Rad23
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
tln Temnothorax longispinosus
Pathway
tln03420
Nucleotide excision repair
tln04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139816248 (Rad23)
09124 Replication and repair
03420 Nucleotide excision repair
139816248 (Rad23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tln03051
]
139816248 (Rad23)
03400 DNA repair and recombination proteins [BR:
tln03400
]
139816248 (Rad23)
Proteasome [BR:
tln03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139816248 (Rad23)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
139816248 (Rad23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_2
Crinkler
TBK1_ULD
UBA_3
OTU1_UBXL
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
ALIX_LYPXL_bnd
CUE
UBA_9
Ubiquitin_4
UN_NPL4
UBA_2
Motif
Other DBs
NCBI-GeneID:
139816248
NCBI-ProteinID:
XP_071639756
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All DBs
Position
7:22145863..22149506
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AA seq
365 aa
AA seq
DB search
MIITLKNLQQQTFTIEIDSSQTVKDLKEKIETQKGFPAEHQKLIYAGKILADEQPLTEYN
IDEKKFIVVMVTKPKAGATPKTSEEQRAEGDKKEESTSAATTQPSSNPNVQDTTRAASNV
QEQPAAAAPAAGQAESALLMGEDYNAMVNNIMDMGYEREQVVQALRASFNNPDRAVEYLL
TGIPAQLFEDPPEDPPEAQEQLQDQSPDPLAFLRLQPQFQQMRQVIQQNPALLNSLLQQI
GSTNPALLQLISQNQEAFVRMLNEPVEPTTGTGARVLPASGGGVAPAAAAAAAAAAGGAV
NGGAGTGAAAGVGSGLIQITPQDREAIERLKALGFPEHLVVQAYFACEKNENLAANFLLS
QNLDD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattataacgttgaaaaacttacagcagcaaacgttcacgatagagatcgactcgtcg
caaactgtcaaagatctcaaggagaagatcgagacgcagaaaggcttccccgccgagcat
caaaagttgatatacgctgggaaaatattagcggacgagcagcccttaacagaatataat
atcgatgagaagaaatttatagttgttatggtaacgaagcctaaagctggagctacacct
aaaacaagcgaagagcagcgcgcagagggtgataagaaggaagagtctactagcgcggca
actacgcaacctagttcaaaccctaatgttcaggatactacacgagcagccagtaacgtg
caagagcaacccgcggcagctgcgccagcggctggtcaagcagaaagtgccttgctaatg
ggagaggattataatgctatggtaaacaacatcatggatatggggtatgaacgcgaacag
gttgtacaggcgttacgtgcaagttttaacaaccctgatagagctgtcgagtatctccta
acgggtataccagcgcaactttttgaggatccacctgaagatccgccggaagcccaagag
caacttcaggatcaaagtccagatccgttggcctttctgcgtttgcagccacaatttcag
caaatgcgtcaggtcattcagcagaatccagcgctgctgaacagtcttcttcagcaaatc
ggttccactaatcctgcccttttacagcttatttctcaaaatcaagaagcgtttgtacgc
atgctcaatgaacctgtggaacctactacgggaacgggggcgcgagttttgccagcatct
ggaggaggcgtagcacccgcagctgctgctgcagctgcagctgcagcgggaggtgctgtg
aatggtggggctggcactggtgcagcagcgggcgtaggatccggtttaatacagataaca
ccacaggacagagaagctatcgagaggttgaaggcgttaggtttcccagaacatttagtc
gtacaagcatatttcgcctgtgaaaagaacgaaaatctcgctgctaacttcctactttcg
caaaacctcgacgactga
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