Temnothorax longispinosus: 139816493
Help
Entry
139816493 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
tln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139816493
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139816493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139816493
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139816493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
139816493
NCBI-ProteinID:
XP_071640115
LinkDB
All DBs
Position
7:complement(15479632..15491418)
Genome browser
AA seq
1564 aa
AA seq
DB search
MPKEGGDPAGRRPSSRNAKPYDANNSFVRKVATKVTDFIPQSSWISKWFNTSQDNEGTLE
GRGNSEETELEDDVQQPPIKRARIRMDVTHPPGTFSIKTRVKTALNTVKPSKEQYPVHSE
MTEDFLEPATAGPSGIGRLISSTPAVSADIRTVTSHRSDLNSLASSTNNGIANGMDDNSE
SSESTSGCSSLIPQINRHEGPSNLLYNSTFTSRKRHVDDKLTFTNHLQSPRSLFLDSNSR
DTLSSRRPSFNASIITNTADRASSLSSPFYSGNITFGGANAASLYKRSRNIFNNSNEIQL
KVPRRTNVEVQPSDMEVDSSGMSQTAKKILEALEHFSSPITDAKKIPLKNTNNAMSTVMN
RKRAREEVASPTARIGLRHLTRELTVPTVPDILKLRRRQKLQDTTLMARKIVSARSDPPP
SRQEYQLRAEDADSEKYRGKLKGKSKVNLEQQETVAPVNLPNIPLPITTLPNFNFTLPLP
PSYSAGKTVANKENTFTFASPIKVTEAEKSLQSVDNFTFSNPIIAEDGANNTTDPNSRST
TENEFTVDYAITSIPNSFPNFIWAGSSTAPRLKAKVKNGKNDSVGSAVSKELKSGSVMDA
LFQKSNKIVSNLIGQLSPGLASETTHTDKTASTSVGSDSDVANTYGTESSWECSECMIRN
NSTDKQCTACKTSRSNPNEKTSLPSTSTTDTTVVEPKPVAQDCFGSQFKLSTNQWECAAC
CVRNKQSDATCVACATPKPGSSSTIQKTVKSQNSDLMEKFKPAEGSWQCSGCLLRNSANV
ITCVCCNTSKPMTSVKTKSKKTDNVTESSAQKLNTSTEVTATQKTSNNSEIMSKFKPSKD
SWECPGCFVRNNNSVTTCPCCSTSKPNSTGGPSKAEQTSSNGFGDKFKKPEGAWTCDSCL
VQNDAKHTECVACQASKPGTVKSNESSSNTNSTLQFKFGVSSTQPGGFKFGLNKVDDQSK
PDASPLNGFKFGNPQQNSGMTQFTFGIPKEQNKAVSEASKTNSVTTSSSSTGFLFNVKSP
EKPESTSQNQETKQETLFGTPKSDGSTAASEKQNTSIMSSAPSTASPFTFGVQKPEFTQP
ASNKETQKTSFVTNVTESSKPAAATTDAAPVSTNPMLSSLLTQKNTTKSILNAKPESTFS
FGVPSGISAATTTSTNATTTCLPTFAQPTFTFSDTKTSSQLATIPSFGQVPMSSAACVLS
TSGGSKTTETTPSTKAVNNTPVAPLFPIVSSATPLFNESKTTIAFGTDKPSSFAATGSKL
PVLPGFAMLENKIPTFGGNTESKPAIFGTSETKLPVFNSPPPTATPLPTFDTLSNKTTSS
PFGSSNASAFGNTTTPAFGGVTTTPTIFSTTKPVETNAPNSSLFTFGSASSQQSASSGFN
FSTNVNPPPSASSAKPLFTFGSSSSTPSNVCSNNTFGGGTFGANSAPTNTANFTFNPPKQ
ETPAAFGQGAVATPIFGAPQTNPQTQVTSSFSSTPSSSTGFNFGSTAPVAATSGSFNFGG
MPSTSATPGAFNFNSPASAPAFDPNSRPLYNFTKGSAPPIFTAPPQSAAPAPRKIKKAFR
RCVR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaggcggcgatccggccggcaggcggccgtcgtcgcgcaacgcgaagccc
tacgacgcgaacaactcatttgtgagaaaagtagcaaccaaggtgacagattttatacca
caatcatcgtggatcagtaagtggttcaatacctctcaagataatgaaggtacgttagaa
ggtagagggaatagtgaggaaacggaactcgaggatgatgtgcagcagcctccaattaag
cgagcgcgcattcgtatggatgtgactcatccacctggcacgttttctataaaaacgaga
gttaaaaccgcattgaatacggttaagccctctaaagagcagtatcccgttcatagtgaa
atgacggaagattttctggaacctgcaacagctggaccaagcggaataggccgtttaata
tcttcgactcctgcagtatcagcagacattaggactgtaacgtctcacaggtctgactta
aattcgttagcttcgtcgactaataatggaatagcaaatgggatggatgataattcggag
tccagtgaaagtaccagtggatgcagttcgcttattccacagataaataggcacgaaggc
ccatcaaacttgttgtataattcgacgtttaccagtagaaagagacatgttgatgataaa
ttgacatttactaatcatttacaatctccaaggtccttgtttctagacagtaattctcgc
gatactttaagcagtcgtagaccgagttttaacgcatcaattataacaaacactgcagat
cgtgcatcttcgctatcctctcctttttatagtggtaatattacttttggaggtgcaaat
gcagcaagtctttataaacgaagtcgtaatatttttaacaattcaaacgagatacaactt
aaagtaccaaggaggacaaatgttgaagttcaaccttctgatatggaagttgattcatcg
gggatgagtcagaccgccaaaaagatattggaagcattagaacatttctcgtcacctata
accgacgcgaagaaaattccgttgaaaaacacgaataacgctatgtctacggtaatgaac
aggaagagagcgcgagaagaggtggcaagtccaaccgctagaattggtttgcgccatttg
acgcgtgaattaacagtaccaaccgtccccgatatattgaagttaagacgaagacaaaaa
ttacaagatacaactcttatggctagaaaaatcgtttccgctcgtagcgatccaccgcct
tctcgacaggagtaccagttgagagcggaggatgccgatagtgaaaagtatcgcggcaag
ttaaagggcaaatctaaagtaaatctagaacaacaagaaacggtagcgcctgtaaatttg
ccgaacatacctctgccaattacaacattacccaatttcaattttaccctaccacttcct
ccttcatattccgcaggcaaaactgtggcaaataaggaaaatacttttacatttgctagc
cctattaaggtgacagaagctgagaagagtttgcagtctgtcgacaatttcacttttagt
aatccgatcatcgctgaagacggcgcgaataatacgactgatccgaattcacgttcaact
acagagaacgaatttactgttgattacgcgatcacatctataccgaattcatttcccaat
tttatttgggctggctcatctacagcacccagattaaaagcgaaggtaaagaacggcaag
aatgattccgtcggatctgcggtgtcgaaggaactgaaatctggaagtgttatggatgca
ttgttccaaaaatccaacaaaatcgtatctaatttaatcggacagttaagcccgggattg
gcttctgaaacgacacacactgacaaaactgctagtacatccgtcggctcggattctgat
gttgcaaacacgtatggtacagagtcgtcttgggagtgtagtgaatgtatgatcaggaac
aacagtacggataaacagtgcactgcgtgtaagacttctcggtccaatcctaatgagaaa
acttcgttgccctcaacgtcaacaacagatacgacagtcgtggaaccaaagccagtcgca
caggattgcttcggttctcaatttaaactatctacgaatcaatgggaatgtgcagcttgc
tgtgtaagaaacaagcagagtgatgccacatgtgtagcgtgcgctacaccaaaaccggga
agtagttcgacgattcaaaaaactgttaaatctcaaaattctgatttaatggagaagttt
aaacctgccgaaggatcgtggcaatgctccggttgcttactcagaaactccgcgaacgtt
attacgtgtgtttgttgcaatacatctaaacctatgacctctgtaaaaacaaaatcgaag
aagacggataatgttacggagtcgtctgcgcaaaagttaaatactagtacagaagtcacg
gcaacgcagaaaacgtctaataattctgaaataatgagcaaatttaaaccaagcaaagat
tcctgggaatgtccaggatgttttgttagaaataacaattccgttaccacctgcccttgc
tgcagcacttctaaacctaattccactggtgggccgagcaaagcggaacagacatcgagt
aatgggttcggagacaaatttaaaaaaccagagggtgcgtggacttgcgattcttgcttg
gtacaaaatgacgctaagcatacggaatgtgtggcttgtcaagcttcaaagcctggtact
gtaaaatcaaacgaatcttcatcgaacactaactctaccttgcaatttaaatttggcgta
tcatctacccaaccgggtggatttaagtttggtctgaataaggtcgacgatcaatctaaa
cccgatgcatctcctctaaatggattcaaatttggtaatccacaacagaatagtggcatg
acacaatttacgtttggtattccaaaggaacagaacaaagctgtaagtgaagcatctaaa
accaatagtgtcacaacgtcttctagtagtacaggatttctattcaatgtaaaaagtcct
gaaaaacccgaatctaccagtcagaatcaggaaaccaaacaagaaacacttttcggtacg
ccgaaaagtgatggttcaacagcagcaagtgaaaaacagaatacaagcattatgtccagc
gctccatcgaccgcttctcctttcacctttggtgtacagaaaccagaatttactcagcct
gcttcaaataaggaaacgcaaaagacttcctttgtaaccaatgtgacagaaagttccaag
ccagcagcagcaacaactgatgcagcaccagtcagcactaatccaatgttatcgtcgtta
ctgacccaaaaaaatactacgaagagtatattaaacgcaaaaccggagtcgacgttttca
ttcggggtaccaagcggtataagcgctgccactacaacttccacgaatgcaacgactact
tgtcttccaacttttgctcaacctactttcacattttccgacacaaagacgtcatctcag
ttagctacaataccgtctttcggtcaggttccgatgtcgtctgccgcgtgcgtattatcc
acgagcggaggaagcaagacaaccgagactactccgtcaaccaaagccgtgaataataca
ccggtcgctccgctcttcccgatcgtctcgagtgccacaccgctattcaacgagtcgaag
acgacgatagcattcggcacggacaaaccgtcgtcgttcgccgcaacgggcagcaagctg
ccagttttgccaggatttgccatgctcgagaacaaaattccaacgttcggcggtaatacc
gagagtaaaccagcgattttcggtacgtcggaaacgaagttgcccgtattcaattcacca
ccgcccacggcaactcctctaccaacgttcgacacactgtccaacaagactacttcgtcg
cccttcggatcatctaatgcctcggcttttggaaacactaccacacccgctttcggaggt
gttacgacaacacctactatattctcaaccacgaagccggtcgagactaatgcgccgaac
tcgtctttgttcacgtttggttcggcttcgtcgcaacaatcggcaagcagcggatttaac
ttctctacgaatgttaatccaccaccgtccgcgtcgtctgcgaagccgctcttcacgttt
ggtagcagttcgagtacgccgtcgaatgtatgcagtaacaatacattcggtggcggtaca
tttggagctaactctgctccaacgaacactgccaatttcacgttcaatccacctaaacaa
gaaacaccggcggcgttcggtcaaggtgcagtggcaactccgatattcggtgccccacag
acaaatccgcagactcaagtaacgtcatcgttttcgtctacaccttcgtccagtacagga
ttcaactttggatccacagctccggttgctgcgacatcaggaagtttcaactttggagga
atgccatctacatctgcgacacccggagcatttaattttaattctcctgcttctgctccc
gctttcgatcctaatagtcggcctttgtacaacttcaccaaaggaagtgcaccaccaata
tttactgctccacctcaatcggcggccccagcaccacggaaaatcaaaaaagcatttcga
agatgcgtgcgttag
DBGET
integrated database retrieval system
