Temnothorax longispinosus: 139816880 Help Entry 139816880         CDS       T10889                                  Name (RefSeq) neural-cadherin isoform X1   KO K27892   neural-cadherin Organism tln  Temnothorax longispinosus Brite KEGG Orthology (KO) [BR:tln00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tln04515]     139816880 Cell adhesion molecules [BR:tln04515]  Cadherins   Cadherin related    139816880 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Ig_Shg Laminin_G_2 Laminin_G_1 CADH_Y-type_LIR Cadherin_CELSR2_9th RET_CLD1 Cadherin_pro EGF hEGF Cadherin_3 EGF_Teneurin EGF_2 EGF_TEN RnlA_toxin_N ResB Motif Other DBs NCBI-GeneID:  139816880 NCBI-ProteinID:  XP_071640783 LinkDB All DBs Position 7:5448904..5651502 Genome browser AA seq 3023 aa AA seqDB search MWHARVVVFLLAIASVIYAKVAVLPHDVYPGYEVTQFRRDASRASNFRLLETGFSKYFTV LGNGLVMTTSDLTPLVDRPVNLIVLEELANGTQTHDLHLYVINRRNMLTFSHDRLGEGEV PENSPVGTRIDGFPVLRARGSFPVHYKILPDDNGERPFALRESESSDTGFNLTLKSQMQG VRVVTARPLDREIRGIYTVVIHASDGNFLSTSKISGIVHVLDQNDNSPIFERELYVFEIR PTNLDTLRKNNVAQPGWKRFSTVGKVTAKDADGDKVAYKLVTPSSLLIVVPQTGELLLAG EPEVSSEQDGECELVVEAHDLRTPSRSTEKPAKVIVRFLTSEPDDPPEVHRIQKRRVTRA VRPTKKVDFTEADGNVEGKIAFYLEKENEKETYKIRDENKWVTVGANGSVMVKQKWDYEE LGPEKTIDFWVTITNTGTEPCVRYPPGVPCPFYDDTDNQRVIINMKDVNDEPPYFINRPL PMQTVVQLNAPPNTHVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLF QLDMEYVLYVKAEDQNGRIDERRFQSTPEERLSIVGGKRAPQFYMTAYEAEIPENQKKDS DIISVKAKSFADREIRYTLKAQGQGAAGTFNIGPTSGIVKLAKELDFEDLRQPHIYSLIV TATEDSGGFSTSVELTIRVSDVNDNAPKFELPDYQAHNVDEDIPLGTNILKVKATDADSG ANAEIEYLVSDDHFSVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPSKTGTATVRIY TKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFRFVGGNTTSGQFVIE EITGVIRLHGKEISLDRDKYELNVTALDDGACCPNGDKTIHTSTAVVVVFITDVNDNKPV FKDCSSYIPKVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQ VLTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVENV KQDASIGTNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWIVLKKPLDRE TYKLEAMAKDRGYPPLSRTVEVQIDVVDRANNPPVWDHVVYGPIYIKENMAVGAKVVSIK ASSGIDNNPTVFYHLMPGSTAQTNKFHTFYLQQRAEQATTWADIKVNHPLDYESIKEYNL TIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPVGSKVTQVNAIDKDG TFPNNQVTYYVVNSDRNEGKDYFEINRETGEIFTKVMFDREKQGAYALEVEARDGAPSAR PNSNGQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQHTVLTVTAKDHDESSR IRYEITSGNIGGAFAVKNMTGAIYVAGALDYETRKRYELRLTASDNLKENYTTVVIHVKD VNDNPPVFERPNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPA NSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDN APIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGTNARLIYSIEKNVIEEETGSPIF EIESETGVIKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDE WFTEVDETEGPDLPEMPILTVTVHDEDETNKFQYKVIENSGYGADKFTMVRNNDGTGSLK IVQSLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNQPQFEKANI ETTVPENARIGSSLETFKATDPDQGGKSKVSYSIDRSSDRKRQFFINENGTVSIQRSLDR EETPRHQVKILAIDDGIPPKTATATLTVVVQDINDNPPRFLKDYRPVLPEYAQTKKVVEI LATDDDDRSRSNGPPFTFRMDPNANDVIRASFKVESDNKGANGDGMAVVSSLRSFDREQQ KEFLIPIVIKDSGNPSMSGTSTLTVIIGDVNDNKMQPGSKEIFVYNYAGQSPDTEIGRVY VYDLDDWDLPDKKFYWEGLEHAQFRLDEDSGMIYMKSGTHDGKYHLRFKVYDRKHTQTDV PANVTVTVKSIPHEAVLNSGSVRISGITDEDFIRVWNYQNQTLSRSKADLFRDKLSHLLN IDRDNVDVFSVQLRRVHPPLTDVRFAAHGSLYYKPVRLNGIVLMHREEIEKDVGINITMV GIDECYYENEMCEGSCTNTLDISNLPYMVNANRTALVGVRVDVIAECTCGARNFSKGESC RNSPCYNGGRCVEDRFGLSCQCPSGYNGPRCQQTARSFRGNGWAWYPALEMCDNSHLSFE FITRKSDGLLLYNGPIVPPEVDEIMVSDFISVELERGIPRLLIDFGSGTLELKVKPKKTL DDGEWHRLDIFWNTETVKLIIDYCKSAEISELEDGSPPEFNDTSCQATGTIPPFNEYLNV NAPLQIGGLYVEQFDPTHYKWKHMPVGKGFDGCIKNLFHNSKLYDLAHPGLSRNSVAGCP QTEEICNNQESTFRCWEHGTCVGSFTEARCQCNPGWTGPGCMTPTIPTTFKPQSYVKYAL SFEPDKYSTQVQLRFRTREIHGELFRVSDQHNREYAILEIKDSRLHFRYNLNSLRTEERD IWLSAIAVDDGQWHTVRVSRYGSAATLELDGGEGRRFNETFSFEGHQWLLVDKQEGVYAG GKAEYTGVRTFEVYADYQKGCLDDIRLEGKHLPLPPAMNGTQWGQATMARNLERNCPSNK PCANVICQDPFECIDLWNEYDCTCGEGRIPSPDNKGCMDKNECIDYPCLNGGRCINQDPR FRYRCICPDGFWGENCELVQEGQTLKLSMGALAAILVCLLIILVLVLVFVVYNRRREAHI KYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPIPEMGGKLPPCKVAYPLGP EPNVGVFIEDHKKRADSDPNAPPFDDLRNYAYEGGGSTAGSLESLASGTDDEQHEYEYLG AWGPRFDKLADMYGPAEESEEEE NT seq 9072 nt NT seq  +upstreamnt  +downstreamnt atgtggcacgcacgagtcgtcgtcttcctactggcaatcgcttccgtcatctacgccaag gtggccgtgttgccgcacgatgtctaccccggttacgaggtgacgcaattccggcgcgac gcgagtcgcgcctccaatttccgtcttctggagaccggtttctccaagtacttcaccgtg ctgggcaacggcctggtgatgacgacgtcggatttgacgccgctggtggatcgtcccgtg aacctgatcgttctggaggaactggccaacggtacgcagacccacgaccttcacctgtac gtcatcaatcgccggaacatgctgaccttctcgcacgaccgtctgggcgagggtgaggta ccggagaactcgccggtcggcacgcgaatagacggctttccggttttgcgggcacgcggc agctttccggttcactacaagattctaccggacgacaacggggaacgtcccttcgctctg cgagagagcgagtccagcgacaccggcttcaatctcaccctgaagagccagatgcagggc gtcagggtggtcaccgcgaggcccctggatcgcgagatccgcgggatctacaccgtcgtg atacacgcgtcggacggtaacttcctcagcacctcgaagatcagcggcatcgttcacgtg ctcgatcagaacgataacagccccattttcgaacgggagttgtacgttttcgagatcaga ccgaccaatttggataccttgcgtaaaaataacgttgcgcaacccggctggaagaggttc tccaccgtgggtaaggtcacggccaaggacgcggacggggacaaggtcgcgtataagttg gtcacgcctagcagcctgctgatcgtcgtgccgcaaaccggcgagttgttactcgccggc gagccggaagtcagctcggagcaggacggcgagtgcgagctggtcgtcgaggcgcacgac ttacgcacgccgagccgcagcacggagaaaccggccaaggttatcgtgcggttcctcacc tcggaaccggacgatccaccggaagtgcatcgtatacagaagaggagggtcactagggcg gtgcgaccgacgaagaaggtcgatttcaccgaggcggacggaaatgtcgagggcaagatc gcgttttatttggagaaggaaaacgaaaaggagacctataagataagagatgagaacaag tgggtcaccgtgggcgccaacggctccgtgatggtcaaacagaagtgggactacgaggaa ttgggcccggaaaagactatcgacttctgggttaccattacgaacacaggtacagagccg tgcgtacgatatccacccggtgtcccgtgcccattttacgacgataccgacaatcagcgc gtcatcatcaacatgaaggatgtgaatgacgagcctccgtatttcattaatcggccacta ccgatgcaaacggtcgttcagctgaacgcaccgccgaacactcacgtgttcacccttcaa gccagggatcctgacaccgaccacaacatccattacttcatcgtgcgagatcgaactggc ggtcgctttgaggttgacgagagatcaggcgtagtgcgtactcgaggtaccgacctcttc cagttggatatggagtacgtcctttacgtgaaagccgaggatcagaacggccgtatcgac gagaggcgtttccagtcgactcctgaggagagactatcgatcgtcggtggaaaacgcgca ccgcagttctatatgacggcgtacgaggccgagataccggaaaaccagaagaaagactcc gacataatatcggtgaaagccaagtcgttcgccgatcgggagatacgctacacgctgaag gcgcaaggtcaaggagccgcgggtacgttcaacatcggtccgacttccggaattgtgaaa ctcgcgaaagaactggatttcgaggatctgcggcagccccatatctattctctgatagtg acggccacggaggactctggcggcttctcgacatcggtcgagctaacgattcgggtgtcg gacgtgaacgataatgcccccaaattcgagctaccggattaccaagctcacaacgttgac gaggatatcccgttgggcacgaatatactgaaagtcaaggcaactgacgctgactcaggc gcaaacgcggaaatagagtatttagtgtccgatgatcacttcagcgtggattccaatggt attattgtcaataataagcagctcgatgcagacaacaataatgcctactacgaattcatc gttactgctaaagataagggcgagccgtcgaaaaccggcacggcgacagtacggatatac acgaagaataaaaacgacgaggagccgaagttctcccagcaggtttacacgcctaacgtc gacgagaacgccgggccgaacaccctggtcaccaccgtggtggcctccgacaaggacggc gataacgtgcgatttcgattcgtcggcgggaacaccacgtcggggcagttcgtgattgag gagatcacgggtgtgattcgtcttcacgggaaggagatctccttagatcgggacaaatac gagctgaacgtcaccgcgttggacgacggcgcgtgctgtccgaatggcgataaaaccatt cacaccagcaccgcggttgtcgtggttttcataaccgacgtgaacgacaataagccggtc ttcaaggattgttcgagttatatcccgaaagtggaggagggcgcgccgaacggcagcacg gttattaaggtacaggcgaccgacgaggacaaaggtgtcaacgggcaagtcaagtattcg atcgtacaacagcctaatcagaagggcacgaagtttaccgttgacgaggaaaccggccag gtcttgaccaataaggtgttcgatcgcgagggcgatgacggaaaatttgtatccgtcacc gttaaggcgacggatcagggtgagccctcgctggaaggtgtttgctcatttaccgtcgaa ataacggacgtgaacgacaacccgccgttgtttgaccgacagagatatgtggaaaacgtg aagcaagacgcgagcattggtacaaacatattaagagtgtcggcatccgacgaggatgct gacaacaatggcgcgatcgtatactcgctgagctcacccaacaacgagcaaaatctggag tactttgagatccagccagagtctggttggatcgtgttaaagaagcccctagaccgcgag acgtacaagctggaggcgatggccaaagacaggggctacccacccttgtcgcgaacggtg gaggttcagattgacgttgtggaccgtgcgaataatccgcccgtatgggaccacgtagtg tatggcccgatctacattaaagagaacatggccgtcggggctaaagttgtgtctattaaa gccagctctggaatcgacaataatccgacggtcttttaccacttaatgcccggttcgacg gcgcagacgaacaagtttcatacgttttaccttcagcaacgcgccgagcaagcgacaact tgggccgatattaaggttaatcatccgctggactatgagagtataaaagagtacaatctc accatacgagtggagaataatggagctcaacagctggcttccgaagctaccgtgtacatc atgctggaggatgttaacgacgagataccgctgttcactgaacgagaacaggaaaccgta ctcgagggtgaaccggtgggcagcaaagtcacccaagtgaacgccatcgacaaggacgga acgttccccaataatcaggtcacatattacgtggtaaacagcgacaggaacgagggcaag gattacttcgagatcaacagggaaacgggcgagatcttcacgaaagtaatgttcgatcgc gagaagcagggtgcttacgccctcgaggtagaggcccgagacggagcaccttccgcacga cctaacagcaacggccaacctaactcagtaacaaaattcattcgcatcgggatagctgac aagaacgataatcccccatatttcgacaagggcctctacgaggctgaggtagatgaaaat gaggacattcagcacacggtgctcaccgtcaccgccaaagatcacgacgagtcctcgcgt attcgatacgagatcacgagcgggaacataggcggtgcattcgccgtgaaaaacatgacc ggcgccatttacgtcgcgggtgcgttggactatgagacgagaaagaggtacgagcttcgg cttactgcgtcggacaacttgaaggagaattacacgacggttgtaattcacgtgaaggac gtaaacgacaacccgcccgtcttcgaaagaccgaattacagaacacaaattaccgaagag gacgacaggactttgccgaaacgcgttctcggggtaaccgcgactgacggggataaagat agaccgcaaaacattgtctacttcctgactgggcagggtatcgatcccgataatcccgcg aacagcaagttcgacatcaatcgcacgactggagagatttttgttctgaagccgctggac agagatcaaccgaatggccggccacagtggcggttcaccgtgtttgcccaggacgagggt ggagaaggtctcgtgggttacgccgacgtccaagttaacctcaaggacatcaatgacaac gccccgatattcccgcagggtgtctacttcggcaacgtcaccgagaacggcaccgcagga atggtggtgatgacgatgacagctgtggattacgacgatccaaatgaaggcacgaacgca agacttatctactccatcgagaagaacgtcatcgaggaggagaccggctcgcccattttc gaaattgaatcggaaactggcgtcatcaaaactgccgtgtgctgcctggatcgagaacgc accccggattattctatacaagtcgtcgcgatggatggaggggggttaaagggcaccggg acggcatcgatacgggtcaaagacataaacgacatgccaccgcaattcacgaaggacgag tggtttaccgaagtggacgagacggaagggccagatctgccagagatgccgatactcacc gtaaccgtccacgacgaagacgagaccaataaattccaatacaaggtaatcgaaaacagc ggttacggtgccgataaatttactatggtacgaaacaacgatggcacaggatcgttgaaa attgtgcaatcgctggattacgaggaccaactgcagagtaatggctttaggtttaggata caagtgaacgataagggcgaggacaatgacaatgataaataccacgtggcctattcctgg gtggtcgtgaaattgcgagatatcaatgacaatcagccacaattcgagaaagccaatatc gagactaccgtgccggagaacgcccgcataggcagcagcctggaaacgttcaaggccact gatccggatcaaggtggcaagagcaaggtctcctattccatcgacagaagctccgatcga aagagacagttcttcatcaacgaaaacggcaccgtgtcgatacagaggagccttgatcgc gaggaaactcctcggcaccaggttaaaattttggcgatcgacgatggaataccacctaaa accgcgacagctaccctgacagtcgtcgtacaggatattaatgacaatccaccgagattc ctcaaggactatcgtccagttttaccggaatacgcgcaaaccaaaaaggtcgtcgaaatt ctcgccaccgatgatgatgatcgatctaggagcaacggtcctccgtttactttccggatg gatcctaacgcgaacgatgttattagagctagcttcaaagttgagagcgataacaaggga gccaatggagacggaatggccgtggtgtcatccttgcgatcgttcgacagggaacaacaa aaggagttcttgattcctatcgtcatcaaggattccgggaacccttcaatgtctgggacc agtaccttgacggttatcataggggacgttaacgataataagatgcagcctggctccaag gaaatctttgtatataactacgcaggacaatcgccggataccgagataggtagagtgtac gtgtatgatctggacgactgggatctgccggacaagaaattctactgggaaggactggag cacgcgcaattcagactcgacgaggactcggggatgatttacatgaaatctggcacgcac gacggcaagtatcatctacggttcaaggtctacgatcggaagcacacgcagacggacgtg cccgcgaatgtgactgtcaccgtcaagagtatcccgcacgaggcggtgttgaattcaggc tcggtccgaatatccggaataacggacgaggactttattcgcgtctggaattatcagaat caaactctgtcgcggagcaaagcggatctattcagggacaagctgtcgcatctattgaat atagacagggacaatgtggatgttttcagtgttcaattaagaagagtgcatccaccgttg acggacgtcagattcgccgcgcatggctccctatattacaaaccggtcaggcttaacggc attgtacttatgcatcgcgaagagatcgagaaagatgtgggtatcaacataactatggtc ggtatcgacgagtgttactacgagaacgagatgtgcgaaggcagttgtacgaacaccctc gatatcagcaacctgccgtatatggtgaacgcgaacaggaccgcccttgttggcgtacgc gttgacgtgatagccgagtgcacctgtggagcacgaaatttcagcaagggcgagtcctgc aggaacagtccctgctacaacggcggacgctgcgtggaagaccgatttggattgtcatgt caatgtccatctggttacaacggcccaaggtgtcagcagaccgctagaagctttcggggc aacggttgggcatggtatcccgctttggagatgtgcgataatagtcacttgagcttcgag tttatcacaagaaaatctgacggactattattgtacaatggtccgattgttcctcccgaa gtcgacgagataatggtttctgactttatctcggtcgaattggaacgtggtataccgagg ctactgatcgattttggatctggcactttggagctgaaagtgaagccaaagaaaaccttg gacgacggcgagtggcatcgacttgacattttctggaatacggagaccgtgaagctcatc atcgactactgcaaatccgcggagatatccgagttggaggatggaagcccaccggaattc aacgacactagctgccaggccacgggcacgataccgccgttcaacgagtacctgaacgtg aacgcaccgctgcagatcggcggtctctacgtagagcagttcgatccgacgcactacaag tggaagcacatgccggtgggcaagggcttcgacggctgcatcaagaatctcttccacaac agcaagctgtacgatctcgctcacccgggtctctcgcggaacagcgtcgccggttgcccg cagacggaggagatctgcaacaatcaggaatcgaccttccgctgctgggaacacggcacc tgtgtcggcagcttcactgaggcgagatgccagtgcaatcccggctggaccggtcccgga tgcatgacgccgacgatcccgaccaccttcaagccccagagctacgtcaagtacgcgctg tccttcgagccggacaagtactccactcaggtgcaactgagattccgtacccgagagatt cacggcgagctgttcagagtgagcgatcagcacaatagggaatacgccattttggagatc aaggacagcagactgcacttcaggtataatctgaacagtcttaggacagaagaacgagat atctggctctcggcgatagccgtcgacgatggacaatggcacacggtcagagtgtcgaga tatggatccgctgcaactttggagttggacggtggcgaaggacgaagattcaatgagacc ttttcattcgaaggtcatcaatggctcctcgtggacaagcaggagggtgtctacgccggt ggcaaggcggaatacactggcgttcgcacatttgaagtttacgcagattatcagaaaggt tgtttggacgacataagattggaagggaaacatcttccgctaccacccgccatgaacggg actcaatggggtcaggcgacgatggcgcggaacttggagaggaattgtccgtcgaataaa ccgtgtgccaatgtcatttgtcaagatcccttcgagtgcatcgatctctggaacgaatac gactgcacttgcggggagggaagaatcccctcgccggataacaagggatgcatggataaa aacgagtgcatcgactatccttgcctgaacggtggcagatgtatcaatcaggacccgcga ttccgataccggtgcatttgtcccgatggcttctggggcgagaactgcgagctagtccaa gagggacagacgctcaagctgagcatgggcgcgttggcggcgatcctcgtctgtctcttg atcattctcgttctcgtcttggtattcgtcgtttacaacagaagacgagaagcgcacata aagtatcccggcccggatgacgacgtgagggaaaacatcatcaactacgacgacgagggt ggcggagaggacgacatgaccgcgttcgatatcacgcctctgcagattccgatcggtggc ccgataccggaaatgggtggcaagctgcctccgtgtaaagtagcctatccacttggaccg gaaccaaacgttggcgtctttatcgaggatcacaaaaagagggccgatagtgatccaaac gcaccgcccttcgacgatttacggaattacgcatacgaaggtggcggaagtaccgcgggt tctctagaatcattagcctccggtacggacgatgagcaacacgaatacgaatatctaggc gcctggggcccaagattcgacaagctggccgacatgtacggtcccgcggaggagagcgag gaggaggaataa

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