Temnothorax longispinosus: 139816896
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Entry
139816896 CDS
T10889
Symbol
Isha
Name
(RefSeq) uncharacterized protein Isha isoform X1
KO
K13191
RNA-binding protein 16
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139816896 (Isha)
03041 Spliceosome [BR:
tln03041
]
139816896 (Isha)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139816896 (Isha)
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139816896 (Isha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139816896
NCBI-ProteinID:
XP_071640820
LinkDB
All DBs
Position
7:complement(2924501..2934903)
Genome browser
AA seq
1605 aa
AA seq
DB search
MEAVKAFNAELSALYEVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQTVNSNGTLNASSGNNLSNVSAVTKTPPSAIKNAVK
DPKLFPSGKTIDPVWLAQTKMEAAVNANKLLNQSNSGQMDSSLFDQLQHLQQLLLKKDAS
NEPKSSVKFDKKLLDFDYGEEEDDDVVVTNSPNTAASTNTQHNAVSANSSLESLGLLLAN
PEVLRQLQTLQQTMQSNASSSQLEMEEKMRKLQQMKQQEEEFDKHLAQTVSNLPFASECE
LKPSDILKPNTQNYASNMNSNVMQDMSQPPPGYPPALSYASQALSSIRQMNQSTHQNQKS
PLLDERQETQDYSGNSIRRDSSSVEIVNCENTSSQSRSPERYRHHSRSRSPRHRDRDRDR
DRDRKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKDRERRKRGLPPIIRDKLS
VCSTTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKLK
NQKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLNNITDQELELLEEGGMID
EDTLPPHLKGKLKHTGTSADVLQQQLHLQQQAMVAAANAGAPIPTLTDGIVNVIQSSANS
QQQQQQQQQLVDTSQPPPIRPPTSAALLPPPNTQLQMMPPAFTMPGVPRMISHMGLQMTH
GLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPSVNPPFGAGVGVSLLTQIPLPAPAAPSDK
PNSTGYEILNIAGMPHNVPPIGVPPPTTETSMPNLPMLRQPYGVGPAPPMQMQLPQQQHH
SDDMDVEMEDAMPQSLSSNLPKDKPNLSDQLIAAMNISGGVNDCRLENDQSREYKERERD
RENRERRDRGDRDRGDRMDINECRMDRGRDRGRGRDRGRDRRRDGRDGRERERDERRDRD
NRESRESRESSTRHSEGPSVQNQNVQEGEGMAKKEGKPSLAERLRQLADGTLPLDDRMDR
NMRGNRSERSNERNDRNFEESPGGAAARRPPGDMPISLMDLPKFGVLPPERTDFPRGPDF
RPGPPDAREFPQRGLPDRPDRQNFPPRGGPRASQMDDFLDPRMQPGIFPEEYESRLGHNG
PRPDDFPPSRLGPARDEFERPEVRARRPPVDEYERERFEYEMRREGFDPRMQDGFDLRGH
NERSDFDLRRREFFGGPMEPVFGMPPLMGPKGPRGPVGPEGFGPRGARGPGPLMFHLRGM
GPRGMRPGMRPPFAPRGPPFDPREADSFFRPPFDEMRGRPGPHIRPPFGPMGPPAMHGPD
GPWRNQEGGGPPPASWSGQEGPEGHAQRENHLPRDKQKLTKHQDYKNISERENRNRNRKS
RWGNVSPPLTDDVDEMPSEEAENKVETSDGGELVAKNSFDVSSSAIDQQSLLMQKKQDES
TIHEQDVMHSDRENEFASMPNDKGSDEISYKNDKNQASTFEIGADHFSSNDLTLKQRGEE
EQCEYEAPIPAEDSAQQHVVQSIEQIGHVSENHSEQSVEHQVDSL
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaaggcgttcaacgcggagctctctgctctctacgaggtcaaaccccct
atctcaaaagccaaaatgaattcgcttacacggggagccatcaaagcaataaaattctac
aaacatgttgtacaaagcgtggaaaaattcattcaaaaatgcaagcccgagtacaaagta
ccagggttgtatgtaatagattcaattgttcgacaatcccgacatcagtttgggatggaa
aaggatgtgttcgctccgcgatttgcgaaaaatatgcagacgacgtttctcaatcttttg
aagtgtccgcaggaggataaaagcaaagttatacgtgtattaaatctttggcaaaagaac
gcagtttttccaccagaagttattcaaccactttttgatctggcagacccaaaccatcca
atacataaggaacagacagtaaatagcaatggtacattaaatgcatcgtctggaaataat
ctaagtaatgtaagcgcggtcactaagactccaccatctgcaattaaaaacgctgtgaag
gatcccaaactatttccatccggaaaaacgatcgatccagtatggttagcacaaacaaaa
atggaagcagcagtcaatgcaaataaacttttgaatcaatccaattccggccagatggat
tcctctcttttcgaccagttacaacatttacagcaactacttttgaaaaaggatgcttca
aacgaaccaaagagttccgtcaagtttgataagaaattgttagattttgattacggcgaa
gaagaagatgacgatgttgttgttactaattctccaaacacagctgcctcaaccaatacc
cagcacaatgcagtttcagcaaacagcagtttagaaagccttggactgttacttgcaaat
ccagaggttttgagacaattacaaactttacaacaaaccatgcaaagcaatgcatcctcc
tcacaacttgaaatggaagaaaagatgcgcaagctgcaacaaatgaaacagcaggaagaa
gaattcgataagcatttagcacaaactgtttctaaccttccatttgcatctgaatgcgaa
ttaaaaccttctgatattttaaaaccaaacacacaaaattacgcatcaaatatgaacagc
aatgtaatgcaagatatgagccagccaccacctggttacccgccagctctgtcatacgct
tcgcaggctttatcaagtattcgacaaatgaatcagtccacgcaccaaaatcaaaagagt
ccgttacttgatgaacgacaagaaacacaagattattccgggaacagtatcaggcgtgat
agcagcagtgtagaaattgtaaactgtgaaaacacgagttcccaaagtagatcgccagaa
cgatatcgacatcacagtcgatctcgatctccacggcacagagatagagatagagatcga
gatagagataggaaatctcgatctagaagcaggtcaagacgaagaagatctcggtcaaga
gacaggggtcgtgatagaaaacgtgatgatagtcgagaaaaaatgacggaagaagagcgg
gagaaggatagggagcgacgcaaacgcggtttgccgccgataattagagataaattaagt
gtttgcagtacaacactttgggtaggacatttgtcaaaacttgtacatcaagaagaattg
tccgacacatttggagagcttggtgatatcgttagcattgatttaatctcgccaagaggt
tgcgcttttatatgtatgaacagaaggcaggatgcatatcgagcactaacgaaattgaaa
aatcaaaaaatgcaaggcaaagctattacgttagcatgggcacctggtaaaggagtgaaa
ggcaaggaatggaaagactactgggaagtagagctaggcgtcagttacatcccttggaat
aaattaaacaacattaccgatcaagaattggagttactggaagaaggaggaatgatagac
gaagacacattacctcctcatttgaaaggaaaactgaaacacaccggcacgagtgcggac
gtcctgcaacaacaattgcatctgcaacagcaagcaatggttgccgctgcaaacgctggt
gctcctattcccactttaacggacggtatcgttaatgtcatccagtcgtcggctaattca
cagcaacagcagcagcaacagcaacaattagtcgacactagtcaaccgccaccaatcaga
ccaccgacatcggctgcgctattgcctcctccgaacacgcagttgcaaatgatgccccca
gcatttacgatgccaggagtgccacgaatgattagtcacatgggcctacaaatgacgcat
ggattaatgccgaatgttccgattggagtgccgccacctaacatgcagagtctgctggga
ccacccggcatgatgcagaccatgttgacaccctcagtaaacccgccatttggagcaggt
gttggcgtaagtttattgacacaaattccactgcccgcacctgcagcgccttcggataag
ccaaactccactggatacgagatcctgaacattgcaggtatgccgcacaacgttccaccg
attggagtaccgccgcctacgacggagacgagtatgccgaacttgccaatgttacggcaa
ccatacggagtgggtccggcgccgccgatgcagatgcaactacctcaacaacagcaccac
tcggacgatatggacgtggagatggaggacgcgatgccgcaaagtttgagcagcaacttg
cctaaggacaagccgaatctcagtgatcagctgatcgcggcgatgaatataagcggcggt
gtgaacgactgtcgtctggagaacgatcaatctcgcgagtataaggaacgagaacgcgat
cgggagaacagggaaaggagagacaggggtgatcgagatcgcggggatcgcatggatatc
aatgagtgcaggatggatcgtggcagggacagaggaaggggacgggatcgtggtcgggat
agacggagggacggtcgcgacggtcgcgagagagagagggacgagagacgcgatcgggac
aaccgtgagagccgagaaagccgggagagtagcaccagacactcggagggaccgagtgtg
cagaatcaaaacgtccaggaaggcgagggcatggcgaagaaggagggcaagcctagtcta
gctgaacgattgcgacaattagccgacggaacgttaccattggatgaccggatggaccgg
aacatgcgtggtaaccgatccgagcgaagcaacgagcggaacgacagaaacttcgaagaa
agtcccggaggcgcagcggcacgacggccacctggcgacatgccgatctcgttgatggat
ctacctaaattcggagtgctacctccggagcgaacagatttcccgcgaggaccggatttc
cggcccgggccgccggacgcacgcgagtttccgcaacgcggcctgcccgatcggcctgat
cggcaaaattttccgccgcgcggtgggccgagggcttcgcagatggacgacttcctggat
cccaggatgcagcctggcatattcccggaggagtacgagagcagactgggccacaatggg
ccccgacctgacgactttcccccgagcaggctaggtccggctcgcgacgagtttgagcga
ccggaagtgcgtgctcgcagaccgcccgtggacgagtacgaacgcgagcgtttcgagtac
gagatgagacgcgagggatttgatccacgaatgcaagacggcttcgatctcagaggtcac
aacgagcgctccgacttcgatcttcgtaggagagaatttttcggtggcccaatggaacct
gtgttcggaatgccgcctttaatgggaccaaaaggaccgagaggaccggttggccctgaa
ggatttggaccgcgtggagcaaggggacctggtccgctgatgttccatttacgtggtatg
ggtccgagaggtatgaggcccgggatgaggccgccgttcgcacctcgaggtccaccgttc
gatcccagagaagcggactctttcttccgacctccgttcgatgaaatgcgcggtcgtcca
ggaccgcacatccgaccaccgttcggtccgatgggcccaccagcgatgcatggaccagac
ggtccgtggagaaatcaggagggcggtggaccgccgcccgcgtcatggtccggacaggaa
ggacccgaaggacatgcgcaacgtgagaatcatctcccgcgggacaagcaaaaattaacg
aagcaccaggactataaaaatatatccgagcgggagaaccgcaaccgaaatcgcaaatcc
agatggggtaatgttagcccgccactgacggacgacgtggacgagatgccgtcggaggag
gccgagaataaagtagagacatcggatggcggggaactagtggcgaagaatagcttcgac
gtttcatcctcggccatcgatcagcagagtcttctgatgcaaaagaaacaagatgagtcg
acaattcacgagcaggatgtgatgcatagtgacagagaaaatgagtttgcgagtatgcca
aacgataagggcagcgacgagattagctataaaaatgacaagaatcaggccagtaccttc
gaaattggtgcggatcatttctccagcaacgatttaacgttaaagcagcggggtgaagag
gaacagtgtgaatatgaagcacccattccagctgaagattcagcgcaacaacatgtggta
caatcgatcgaacaaatagggcacgtcagtgaaaatcatagtgagcaatcagtggaacac
caagtggattcgttataa
DBGET
integrated database retrieval system
