Temnothorax longispinosus: 139817294
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Entry
139817294 CDS
T10889
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tln Temnothorax longispinosus
Pathway
tln04013
MAPK signaling pathway - fly
tln04120
Ubiquitin mediated proteolysis
tln04137
Mitophagy - animal
tln04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139817294
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
139817294
04310 Wnt signaling pathway
139817294
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139817294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tln04121
]
139817294
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139817294
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
139817294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
139817294
NCBI-ProteinID:
XP_071641375
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Position
8:16778490..16785940
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AA seq
279 aa
AA seq
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MSQLNINTGKRGRGVASTSASTVSALSSSTDLASLFECPVCFDYVLPPILQCQSGHLVCT
NCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKYSTSGCTVSLVHTEKADHEDACEF
RPYSCPCPGASCKWQGSLEQVMPHLIMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQS
CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKQAENFAYRLELNGHRRRLTWEAMPRSI
HEGVSSAILNSDCLVFDTSIAQLFADNGNLGINVTISMA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaactaaacatcaacacgggcaagcgagggagaggggtcgcgagtacctccgcg
tcgaccgtttccgccctgagcagctccaccgatctggcgagcctcttcgaatgccccgtg
tgtttcgactacgtgcttccacctattttgcaatgtcagagcggacatctagtctgcacg
aattgcagaccgaaactctcctgttgccctacgtgcagaggtcctttgggtaacatccgt
aatttggcaatggaaaaggtggcgagcaacgtgatgtttccctgcaaatactccactagt
ggctgcacagtctcgctggtgcatacggagaaggcagatcacgaggatgcatgcgagttc
cgtccatacagctgtccttgcccgggcgcgtcctgcaaatggcagggatcgctggaacaa
gtgatgccgcatcttattatgagtcacaaaagtattacgaccttacaaggcgaagacatt
gtttttttggcaactgacattaatctccctggagctgtggattgggtcatgatgcaatct
tgttttggccaccactttatgctggtgcttgaaaaacaagagaagtacgacggacatcaa
cagttctttgcaattgtacaattgatcggatctaggaagcaagcggagaactttgcttac
agactagaactaaatgggcacagaagacgtctcacatgggaagcgatgccgcgttctatt
cacgaaggtgtgtcgtctgcgattttaaattctgactgccttgtatttgacacctccatc
gcgcagctgttcgctgacaatggaaacctaggaattaacgttacaatttctatggcctga
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