Temnothorax longispinosus: 139817419
Help
Entry
139817419 CDS
T10889
Symbol
Clbn
Name
(RefSeq) ribosome quality control complex subunit NEMF homolog
KO
K24971
nuclear export mediator factor NEMF
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tln03009
]
139817419 (Clbn)
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
139817419 (Clbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_1
NFACT_N
NFACT-C
DUF5590
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
139817419
NCBI-ProteinID:
XP_071641592
LinkDB
All DBs
Position
8:17210376..17215277
Genome browser
AA seq
988 aa
AA seq
DB search
MKTRFNTYDLVCSVTELQRLIGMRVNQIYDIDHRTYLIRLQRSEEKCVLLLESGNRIHTT
GFEWPKNVAPSGFSMKMRKHLKNKRLESLMQVGTDRIIKLQFGSGEAAYHVILEVYDRGN
IILTDYEMVILYVLRPHTEGDKIRIAVKEKYPLDKAHSTTMPPIDVIHEHIEKAKVGDSL
KKVLNPLLEFGAAVIDHVLLKAGFNLGCKIGKDFNITEDMPKLILALEEANNMMDHAKNN
ISKGYVIQKKESKLTPDGKEDFIFTNIEFHPFLFEQYNKQPYKEFDSFDVAVDEYFSTME
GQKIDLKALQQEREALQKLERVRKDHSQRLITLEKTQEVDKQKAELISRNQALVDNAILA
IQSALANQMSWPDIQILLKEAQASGDPVASAIKQLKLETNHIALLLHDPYEDSDEESELK
PMMIDIDLAHSAFSNAKKYYSQKKTAAKKQQKTIESHGKALKSAEKKTKQTLKEVQTIHT
INKLRKTYWFEKFYWFITSENYLVIGGRDQQQNELIVKRYLKAGDLYVHADLTGASSVVI
KNPSGNPVPPKSLAEAGTMAVAYSIAWDSKVIASAWWVHHDQVSKSAPTGEYLTTGSFMI
RGKKNYLTQSQLIMGLGIMFRLEDSSIERHKDERRVKTVDEESEKADSVVEDDKEIELEG
DSDEDENLENRDTLNPIQEEDQEKDGESESHTTDNAEKDACEQDEENTKYKFPDTQIKID
LSGPKVKLHVDNNQPLIQSQKDTKENVVYLGDDKPVIINASTMEKNAKAKQKVHRTESIE
STEKIEKNDKNESDNKKGEQPALKRGQKGKLKKIKEKYKDQDEEDRRLSMLVLQSAGAAK
EDKRKNRAKDPSGPKQQGKKKTNPKPNIPPQSMYVVDNVDDEDAGPVPEVDMLDQLTGKP
FSEDELLFAVPVVAPYNTLQNYKFKVKLTPGIGKRGKAAKTAIAVFLRDKEISSREKDLL
KAIKDETIARNIPGKVKISAPQIQKLKK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgatttaacacttacgatctcgtatgttcagttactgaactacaaaggctt
attggcatgcgtgtcaatcaaatatacgatatagatcaccgtacgtatctcatacgtctt
cagcggagcgaggaaaaatgtgttcttttgctcgaatctggtaacagaatccacacgaca
ggttttgagtggccgaagaatgtggctccttcaggtttctccatgaagatgcgcaaacat
cttaaaaataaaagattagagagtcttatgcaagttggtacggatcggataataaagtta
caatttggaagtggtgaagctgcctaccacgtaattttagaagtgtacgatcgtggtaat
ataatcctcactgattatgaaatggtaattttatatgtgctaaggcctcatacagaagga
gataagattagaattgcagtgaaagagaaatatcccttagataaagctcattccacgact
atgccacctatagatgtaatacatgagcatattgagaaagctaaggtgggagatagtctt
aaaaaagtgttaaatccactattagaatttggcgcagctgtgatcgatcatgttttgctt
aaagccggatttaatcttggttgcaaaattggcaaagattttaatatcactgaagatatg
ccgaaattaatcctagcgctcgaggaggcaaataacatgatggatcatgcaaagaacaat
atctcaaaaggctatgttatacagaaaaaagaatcgaaactgactccagatggcaaggaa
gattttatattcactaacattgaatttcatcctttcttgtttgagcaatataataagcaa
ccatacaaggagtttgattcttttgacgtcgcagtggatgaatatttctctacgatggaa
ggacaaaagatagatttgaaggctttgcaacaggaaagagaagctctgcaaaaattagaa
agagtaagaaaggatcatagtcagagactgattacattggaaaagacacaggaggtagat
aaacaaaaagcagaattgatctcaaggaatcaggctttagtggataacgctatattagcc
atacaaagtgccttggcaaatcagatgtcttggccggacattcaaattttattgaaagaa
gctcaagccagtggtgacccggtcgcttctgctataaaacaattaaaattagaaacaaat
catattgctctgctattgcacgatccttatgaagacagtgacgaggaatctgagctcaaa
cctatgatgattgatatagatttggctcattcagcattcagtaatgccaaaaagtactac
agtcaaaagaaaacagctgcaaagaagcaacaaaaaacgatagaatcccatggaaaagct
ttgaagtcggcggaaaagaagacaaagcaaacattgaaagaagtgcaaaccatacatacc
attaataaattaagaaagacatattggtttgaaaaattttattggtttattacgtctgaa
aattacttagtgattggagggagagatcaacagcagaacgagttgatagtgaaaagatat
ctaaaggcgggagatttatatgttcacgcagatttaactggtgctagttctgtcgtaata
aaaaatcccagtggcaatcctgtaccgccaaaatcgttagcagaggcaggtacaatggct
gttgcatacagcatagcatgggattcgaaagtaatagctagtgcatggtgggtgcatcat
gatcaagtatccaagagtgcgcctaccggagaatatcttactaccggatccttcatgata
cgtggaaaaaagaattatttgacgcaaagtcaattaattatgggattgggtatcatgttt
cgcctggaggacagttccatagaacgacataaggatgagagaagagtgaaaacagtagac
gaggaaagcgaaaaagcggattcagtagttgaagatgacaaggaaatagagttagaaggt
gattcggacgaagatgaaaatctagaaaatagagatacattaaatccaattcaagaagag
gaccaggaaaaagatggggaatcagaatcccacacaacagataatgctgagaaagatgca
tgtgaacaagatgaagaaaacacgaaatataaatttcctgatacacaaattaaaattgat
ctttcaggcccaaaggtaaaattacacgttgacaataatcagcccttgatacaatctcaa
aaggacacgaaagaaaacgtagtttatttaggagatgacaagcctgttataataaatgca
tcgactatggagaaaaatgcaaaggcgaaacaaaaagtacatcgaacagaatcaatagaa
tcaacggaaaagattgaaaagaatgataagaatgaaagtgataacaaaaaaggagagcaa
cctgcattaaaacgaggacaaaagggaaaactaaagaaaataaaagaaaaatataaagat
caggatgaggaagatagacgactttcaatgctcgtcttgcagtcggcaggcgcagctaaa
gaagataaaagaaaaaatagggctaaagatccatcaggtccgaagcaacaaggaaagaaa
aagacaaatccaaaaccaaatattccaccgcaatctatgtatgtggtagataacgttgac
gacgaagacgcaggtccagttcctgaagttgatatgctcgatcaattaacaggaaagccg
ttttcagaagacgagttactgtttgctgttcctgtggtggcgccttataataccttacaa
aattacaaatttaaggtgaaattgacacctggcattggtaagagaggcaaagctgccaaa
acagctatagccgtatttcttagagacaaagaaatttcttcacgtgaaaaagatctacta
aaggcaattaaggatgagacaatagccaggaatatacctggaaaagtgaaaataagcgcc
cctcagattcaaaagctaaaaaaataa
DBGET
integrated database retrieval system
