Temnothorax longispinosus: 139817432
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Entry
139817432 CDS
T10889
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139817432 (Ctr9)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139817432 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_11
TPR_10
TPR_Slam
TPR_9
TPR_7
TPR_MalT
PknG_TPR
ARM_TT21_4th
ANAPC3
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
139817432
NCBI-ProteinID:
XP_071641619
LinkDB
All DBs
Position
8:3795355..3802156
Genome browser
AA seq
1250 aa
AA seq
DB search
MAGSIEIPLRDTDEVIELYLDQLPDGDEVLGILRQEHAQLTIWVNLALEYYKQQKIEDFI
KILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALHLDGQCVGALVGLSVL
KLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLARS
KADALHDSVYYNSIAVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDA
YSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQ
YLGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSAHGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLRRK
QEEERQAFKMRQTEEKRKLEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKPGKKGK
RPRTDQYISDSGGSERDEGREEVPKDRKRKRKPSGETKERKSKGKGRRRKDAGSGNSGSD
SDQPKRKRGRKNARTRKEKSRKGAVETLKGKLVKSKETISTSESDSDTGGLKIASGGESG
NENQPRSSKRIASDSEASRASRSRSRSRSKSGSRSRSSSRSRSASRSRSPSRSRSRSRSR
SRSRSRSVSGSRSRSVSRSKSRSVSRSRSGSAKSRSRSRSGSRKSGSRSRSNSGSRRSGS
KPRSRSSSRKSGSRSRSPSGSRKGVSPSRSRSKSGSRSGSEGRQSRSKSRSRSKSKSVSR
SKSRSRSGSRSRSRSRSKSGSRSRSPSGSARSASPVSRKSVSGSGGSDSE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctctatagagataccactccgcgacacagacgaggttatagaactttattta
gaccagttaccagacggagatgaagttttggggattctgcggcaagaacatgcccaactt
accatttgggtcaatttggcccttgagtattataagcagcaaaagattgaagatttcatt
aagatactcgaatcttctcgtattgatgcaaatattgattaccgtgactatgaaaaggat
cagatgcgagctcttgacatgttggctgcctattatgtccaggaagccaacaaagaaaag
aataaagataaaaagagagatctctttacgaaagctacattattgtatacaacagccgac
aagattatcatgtatgaccagaatcatttgcttggccgagcttatttctgcctgctcgaa
ggcgacaaaatggagcaggctgatgcgcaatttaattttgtgctaaatcagtcgccgaat
aatataccttctctgctcggcaaagcttgcatcgcttttaacaaaaaagactacagaggt
gcccttgcattttataagaaagctcttagaactaatccaaattgtccagccgctgttaga
ctgggaatgggacattgttttatgaaattgaataatcaagaaaaagcgcgacttgcgttt
gagagagctttacatttggatggacagtgtgtcggggcactagttggcctttcggtcttg
aaactaaatcagcagcagcccgacagtataagaactggcgtgcaaatgttatcgaaggcg
tacacgatcgattcgacaaatccgatggtgctgaatcatttagcgaaccatttcttcttc
aaaaaagattacaataaagttcaacatttagcgctgcacgcgtttcacaacacggaaaac
gaagccatgcgggcagaaagttgctatcaactagctagagcatttcacgtccaaggtgat
tacgatcaagcgtttcaatattactatcaggcgacacagtttgctccgcctgtatttgta
ctgccacattttggcctaggacaaatgtatgtttatcgcggtgatgcagaaaatgcagct
caatgcttcgagaaagtcttaaaagcacaaccaggaaattacgaaaccatgaagattctc
ggctcgctttatgctaattcaagttcccaatcaaaacgcgacattgcaaaaaatcatttg
cgaaaagtaacggaacaatttcccgatgatgtcgaagcttggatcgaattagcacagata
ttggagcaaagtgatctgaatgcagccttgaatgcttacggaaccgcaaccaggatttta
aaggaaaaagttcaagcggacataccgccggaaatcttgaacaacgtgggagcgttacat
tacagactcggtaacttagaggaagccaggaagaatctagaggaatctttggcgcgttca
aaagcagacgccctgcatgattctgtctattataattcgatagcagtgaccacgacgtat
aacttagcgcgacttaacgaggcattgtgtgtattcgaccgagcggagaaactgtataaa
gatattttgaaggagcatccaaattatgtggattgttatttgagactcggctgcatggcc
agagataagggacaaatatacgaggcgtctgattggttcaaggacgccttgagaatcaat
aacgaacatccggacgcatggtcactgctgggtaatttgcatctggccaagatggaatgg
ggtcctggccagaagaaattcgagagaattctgaaaaatccgacaacaagcaccgatgct
tattctttaatagcgttgggaaacatttggctgcagacgttgcatcagagtggaaaagac
aaggaaagggagaagcgacatcaggatcgagcattagccatgtacaagcaggttctgaga
aacgatccgaagaacatctgggctgcgaatggtattggcgcagtactcgcgcacaagggc
tgcgtaaacgaagctagagatatatttgctcaggtgcgtgaagcaacggcagaattctgt
gatgtctggctgaatattgcgcacatctatgtggagcagaaacaattcgtcagcgctatt
caaatgtacgaaaattgtttgcgcaaattttataaataccatcatgttgaggtcttgcaa
tatcttggaagagcttactttaaagctggcaagttgaaagaagcaaaactgacgttatta
aaagcacgccgagtagctccgcaggatactgtcttattgtacaatattgctcttgtactc
caacgattggccacgcaaattcttaaagatgaaaaatcaactctgacaactgtacttcaa
gcggttcacgaattaggcctttcgcacaagtactttcagtatttgtcagcgcacggcgac
agaatggaacaattggctgaagctgaagcccggaggtgtcaagatttgttatcgcaagcg
cagtatcatgttgctagagctagaagattggacgaggaagagaagatgttgagacggaaa
caagaagaagaaaggcaagccttcaaaatgcgtcagacggaagagaaacgcaagctggaa
gagatgcgtcgccaaaaagaagaggagatgttgcagaagcgacaggaatatgtggaaaaa
actaagaacgctctggtattcggcgaaatgccgtcagaaaaacctggaaagaagggcaaa
agacccagaactgaccagtatatcagcgatagtgggggatctgaacgagatgaaggcagg
gaagaagtgccgaaagacagaaagcgtaagaggaaacctagcggtgaaactaaagaaagg
aagagcaaaggtaaaggcagacgtaggaaggacgccggaagtggcaatagtggatcggac
agtgatcagccgaaacgcaagcgtggtaggaagaatgcgaggactaggaaagaaaaatcg
cgtaagggcgcggttgagacccttaagggtaagctggttaaatcgaaggaaactatttcg
acgagtgagtcagatagtgacacgggtggccttaaaatcgctagcggcggcgaaagcggc
aacgagaatcaaccacgtagcagcaaacgaattgcgtctgattccgaagcctctcgcgcc
tcacgctcgagatctcgttcaagatcaaagtctggaagccgttcaagaagcagttcgcgg
tcgcgttctgcttcccgttcgcgttctccatctcgatcacggtcgcgctctcgatcacgg
tcgcgctctcgatctcgatccgtctctggatctagatctagaagcgtttcgagatcaaaa
agtcgctcggtatccaggtcaagatcagggtcagccaaaagcaggtcaagatcgaggtca
ggctcgcgtaaaagtggctcgcgatcaaggtctaacagcggctcgcgaagaagtggatca
aagccaagatcaaggtcgagttcgagaaagagcggttctaggtcaaggtcaccgagcggt
tcaaggaaaggcgtatcaccgtcaaggtcccgatccaaaagtggctcgcgttcaggctcg
gagggacgccagtcgagaagcaagagtcgatcgcggtctaaatcgaagtccgtctcaagg
tctaaatcaagatcgaggagcggcagcagatcgcgatcgcgctccagatcgaaaagcggt
tctcgaagccggagtccgagcggatcggcacgttctgcatctccagtatcaagaaaatca
gtttcgggaagtggcggtagtgatagcgaataa
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