KEGG   Temnothorax longispinosus: 139817579
Entry
139817579         CDS       T10889                                 
Symbol
Gkt
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tln  Temnothorax longispinosus
Pathway
tln03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139817579 (Gkt)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tln03400]
    139817579 (Gkt)
DNA repair and recombination proteins [BR:tln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     139817579 (Gkt)
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH
Other DBs
NCBI-GeneID: 139817579
NCBI-ProteinID: XP_071641884
LinkDB
Position
8:20493007..20496383
AA seq 685 aa
MNSIEKKRCPFMEKCYRKNPIHFGEMSHPHLEELLVDQLDGTIEIPEVLHFACNDRSQLL
DQLKVLQMVLRKERDRNKNNQMSVTSSSSSFKTQSLSTATSSKEDYRQKDLKEKVERHKE
ATVQKRQDKLKQMDAEAQALSRALTCEDRKESLESTKPKKRSQEATETGSSVTKKMRQMS
IESSSHTKDSQQSISNTQSSSRNNERDANRGTSIMDMYEACDSEKSRKEVRKRAIQMMRQ
SGYTVSVVEPGEFAIKYAFSAPYHLFYTRVENSRETYNQQFSITFPEILDRSLGEIVNSL
HLNFMVDVGWLCLQYLLAGQRTDMMILYGDRVDREKLSSNITMIEVDMPTKFSCHHTKIM
ILQYKDDGIRVIVSTANLYSDDWENRTQGLWISPHLPLLPESANPSDGESPTGFKKDLER
YLNKYRHPALTQWIWAVRRADFSDVNVFLVASVPGTHKDNEADFWGYKKLAHVLSRHATL
PPDAPQWPIVAQSSSIGSLGPNFESWLSKDIIPCMSRETTKGLKSHPRFQFIYPSIQNYK
QSFDCRNLSCCLPYSTQVHSKQQWIESYLYQWKAKRTGRDRAMPHIKSYTRISPDLKSIP
WFVLTSANLSKAAWGVQRNNHYIMNYEAGVAFIPKLITGTTTFPIEDEEDPAVPVFPIPY
DLPLSRYESSDSPFVSDFLSSLGRT
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgaattcaatagaaaaaaaacgttgtcctttcatggagaaatgttaccgaaaaaatccg
attcatttcggtgaaatgtcacatcctcatttggaggaattactagtggatcagctggat
ggtacgatagaaataccagaagtgctccattttgcatgtaacgatcgttcacagttgtta
gatcaattgaaagtactgcaaatggtgcttaggaaggagagggacagaaataagaacaac
cagatgtctgtaaccagtagttcatcctcttttaaaacacaatctttgtctactgctacg
tcaagtaaagaagattatagacaaaaagacttgaaagaaaaagtagagagacataaggag
gcaactgtacagaagaggcaagataaactcaagcaaatggatgcagaagctcaagcactc
tctagagcattgacttgcgaggatcggaaggagagcttggaaagtaccaagccaaagaag
agaagtcaggaagcaacagaaactggttcttctgttacgaagaagatgagacagatgagc
atagaaagcagcagtcacactaaggatagtcagcagagcatcagcaacactcaaagcagt
tctagaaacaatgagcgagatgcaaatcgtgggacgtctatcatggatatgtatgaagct
tgcgattcggaaaagtcaagaaaggaagttagaaaaagggccattcagatgatgagacaa
tctggatatacggtctccgtcgtggaaccaggagagtttgcgataaaatatgccttttca
gcaccttatcacttattctacacgagagtggaaaattccagggagacttacaatcaacag
ttttccataactttccctgagattctcgaccggagtcttggagaaattgttaacagtctt
catttaaattttatggtagacgtcgggtggctgtgtttgcagtatctgttggctggccaa
cgtacagatatgatgattctgtacggcgatcgggtggatcgtgagaaattaagtagcaac
attaccatgatagaagtagatatgccgaccaagtttagttgtcatcatacgaagatcatg
attctgcaatacaaagacgatggaatcagggtgattgtctccactgctaacttgtattct
gacgactgggaaaacaggacacaaggattatggatctcgcctcacctgcccttgctacca
gaatccgcgaatcccagtgacggggaatctccaacaggctttaaaaaggatctcgagcga
tatctgaataaatatagacatccagctttgacgcagtggatatgggcggtacgaagggca
gatttttctgacgtgaacgtattcctcgtcgcttctgttcctgggactcataaagataat
gaagccgatttttggggatacaaaaaattagcgcacgtcttatcgcgtcacgctacattg
ccgccagatgcccctcaatggcccatcgtcgcgcagagttctagtattggcagccttggt
ccaaactttgagagctggttatcgaaagatataattccgtgtatgtcgagagagactact
aagggtttaaagagtcatccacgtttccagtttatttacccgtcgatacagaattacaag
cagagctttgattgtcgaaatttatcttgctgcttgccctatagtacacaagtgcattct
aagcaacaatggatagaatcatacttataccaatggaaagctaagcgaacagggcgagat
cgtgcgatgcctcatattaaatcctacacgagaatttcgcccgatttgaagagcattccc
tggtttgtgctcaccagcgcaaatctaagcaaagccgcatggggagtccaacgaaacaat
cattatataatgaactacgaggctggcgttgcatttataccaaaacttatcactgggaca
actacgtttcctatcgaggacgaagaggatccagccgtcccagtatttccgattccatac
gatcttccattgtctcgatatgaatcgagcgatagtcctttcgtcagcgactttctcagc
tctctgggcagaacgtaa

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