Temnothorax longispinosus: 139817592
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Entry
139817592 CDS
T10889
Name
(RefSeq) putative RNA-binding protein EEED8.10
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tln04121
]
139817592
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139817592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF7885
F-box
F-box-like
LRR_At5g56370
LRR_RPS2
LRR_4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139817592
NCBI-ProteinID:
XP_071641917
LinkDB
All DBs
Position
8:complement(14269578..14272501)
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AA seq
632 aa
AA seq
DB search
MDDTLEFDYAEMLHHISVVVSDDCLRSEMVDGVPIRKLFVSNLAERTTFKDLRTYFSMYG
NVESCYLRRNQGKSNYAFVTFTKVADAVTAMQDGSRKRIRLHNRDLRVMAADSWHQPDST
EQRLYTMGKDSTKTCERKLSTEQYVHKYLQNDTENVSIHMLNDDCLRHIFLFLPIIDRVR
IEIVCKRWRDLSQDSWHMIKTLDLSPSTWGFTYTHTIRTALLRKILLKCGRFLTRIKLND
PIHYLSQSTLTVIGKLCPNLTNIDVTALTVCASGIRTLANNCRNITKFNLGPSTYSCDNE
LKCLFKLNQNLEYLAITRNNILGKCLLCLPAQTMHTIILDRCDYLQDTHLSMALKELENL
NHLAINECIGIAKHTLEVVGQHCKSLRTLELDGDFPSAQTADMLYLIHLVNLQVLKITYN
PKISDDFLTDLVQHCQQLTNVDITGCSNVSDVGLTAIATLVRLEKLIVSYMHQITDDGLK
NVCGLKELECRRCLFSDRGMTTLIQSSPELQLLDLSGCRNIKDPTLEVAKDVCNSRTNNV
MLKMIVGGTAILTKKEIGQERLPPLLHIVHVDLSDIGSVSNTCLVDELDSWYDGDSDYTE
YSDYIEYSDYTDYSEDDIYCREPDELDHYSDY
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacgatactttagaatttgattatgccgaaatgcttcatcacataagcgtagtcgtg
tcggacgattgcctacgttcggaaatggttgacggcgtaccgatacgaaaattattcgtc
agcaatttggctgaaaggacaactttcaaggatttacgcacatacttttctatgtatgga
aacgtcgagagttgctacttgcgtagaaatcaggggaaaagtaactatgcgtttgtcacg
tttactaaagtggcagatgcagtgacagcgatgcaagacgggagtaggaagcgcataaga
ttgcacaacagagatttaagggtgatggccgcagattcttggcatcaacctgacagtacg
gagcagagattgtatacgatgggaaaagactcgaccaaaacttgcgaaagaaagctcagc
acggaacaatacgttcacaagtatctgcaaaatgacaccgaaaatgtatccatccatatg
ctgaatgacgattgcttgagacatatcttcctgtttttgccaattatagatagagtccgc
atagagatagtttgcaagcgctggagagatttaagccaagattcctggcatatgattaag
acattggatctctcgccatctacgtggggtttcacgtacacccataccatccgtacggct
ttacttcgcaaaatattacttaaatgtggcagattcttaacgcgaataaagctaaatgac
ccgattcattatttaagccaaagcacgttgaccgttatcgggaaactttgccctaatctt
acgaatatcgacgttaccgcactgacagtttgcgcgtcaggtatacgaacattagcaaat
aattgtagaaacataaccaagtttaatttaggaccatctacatatagttgtgataacgag
ttaaagtgtctctttaagctaaatcaaaacttggaatatctcgcgataactagaaataac
attttgggcaaatgcttattatgcttgccagcgcaaactatgcatacaattatattggac
cgttgcgactatcttcaggacactcacctttcaatggcactaaaggagctcgaaaatttg
aaccatctcgcgataaacgaatgtatcggtatagctaaacacacattggaagttgtcggt
cagcattgtaaaagtttaagaacattggagctcgacggagactttccctccgcacaaacg
gcggatatgttgtatttaattcaccttgtcaatctgcaagttttaaaaatcacgtacaat
cctaagatatcggacgatttccttaccgatttagtacaacattgtcagcagcttaccaac
gtagacattacaggttgttccaacgtgagcgatgtcggattaacggctattgctacgtta
gtaagactagaaaaattaatcgtcagttatatgcatcaaattactgacgatggcttgaaa
aacgtgtgtggcttaaaagaattggagtgccgaagatgtctatttagcgatcggggcatg
acaacgctcatccaatcctcgcccgaattacaattgttagatctctccggatgtaggaat
attaaggaccccactcttgaggtggctaaagacgtttgtaacagtcgaactaataacgtc
atgttgaagatgatcgttgggggaacagcaattctcactaagaaagaaataggtcaagag
agactgcctccgctattgcatatagttcacgtcgatttgtctgatattggtagcgtgtct
aatacgtgtctcgtggatgagctggattcttggtacgatggagattcagattatacagaa
tattccgattacatagaatattcagattatacggactattcggaagatgatatatactgt
agagaacctgatgaattagatcattattccgattattaa
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