Temnothorax longispinosus: 139817997
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Entry
139817997 CDS
T10889
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139817997
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139817997
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Nepo_coat_N
TetR_C_34
Motif
Other DBs
NCBI-GeneID:
139817997
NCBI-ProteinID:
XP_071642481
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Position
8:16645544..16710896
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AA seq
975 aa
AA seq
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MSLFPAYSNDKTESANCDDIDNISSKWLSNSSFQTQVPKREPPDPYSSSDESLHESSLNA
EKQVIPETIPRDTKIHARQKADKEQKVEKKRRTHDSKRYKPEYELDVKNIYFEDRRRDKG
NNNINTFCPRARPYYDVSEKYLGYVKRKQAKKDPFHRYYVKNIDSVETAKKKDTVIKKTK
EKETSMIQDEEASVSSWCKNLEEEQKSKTREYNEQLTENPHNIELWLQYVNFQDTLAYYQ
RHQLAKDVHQSTVLKKLSIVEKALEKNTDSKELLKLKLRFMTELTPSDELSNQLEALVNK
DSGNIILWQHFIMVTQGSVAMCTVPRVLDLYSKCFCVLRQRARTNPSVYDTQLLYMLYQC
LTFLRHTGLWEQMWETIRLNLNLNLNLNRTSLSFRGSIDEKKLIGMEEMILMSRLPLNQL
WQRTESLRENCHWISVSRDELELVGDSRRFILPEDVADFIHPILSRNSNFQMAIYSLLCL
KVPLLPCRDCYMKELSLENFHWGIESLEVLLPFMYPMVGEMAGHDQRKELLKDVLEGRLT
SGPQYLKFHPAQEPYLDFVRKIFHTIAESLSSLQRTSIYVWWLRLERLLVSLSKDEPLKH
DNKGKKLRATLKEFLKKNENRNNLYFYKEYALIELEMGRFSNCMNILETAIQSQGTCPSA
ITDMCERAALFNVYRTFIETLLDIRTYNESHRQWILKVFGQMVSSKNENQESLIEEYLHS
CVQDFLQVPSNEKEKDTFFLSNLECDAIVCYAYFLYIKDDDIQTVVNILKSCIDHSKDYP
YLQEMLYESQIAILQLHHERTQSMQTVLKETLSKTLNRYPNNFYALSVFAGIESELPTWR
FNSRSTEIELWRAIAMCLAVRRRIGLLMKLDHSDAVNAALNKLLSFHLTLSRIPSTQCCP
LLWRLYMLLLREHNLCEKKGEEIYHESVTQCPWARSIYIDAAEVAPQLLTQIQDVIREKE
LRMHVTPEELDILRG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctttcctgcttattcgaacgataaaactgaatcagcaaattgcgacgatata
gataatatttcctccaagtggttatcaaattcaagcttccaaacgcaagtccctaaaagg
gagcctcctgatccgtactcctcgtcggatgagtctttacatgaatcttcgcttaatgcg
gaaaaacaagtaatacccgaaacaatccctcgggatacgaagatacatgcaagacagaaa
gctgacaaagagcaaaaagtggaaaagaaaagacgtacacatgacagtaaacgatataag
ccagagtatgagctggatgtcaagaatatatactttgaagatagacgtagagataagggg
aacaataacataaatacgttttgccccagagcgaggccatattacgatgttagtgaaaaa
tatctcggttacgttaagcgtaaacaagcaaaaaaagatccatttcacagatattacgtc
aaaaatattgattctgtagaaacagcgaagaagaaggatacagttatcaagaagacaaaa
gagaaagagacttcgatgatacaagacgaggaagcaagtgtatcttcttggtgcaagaat
ttggaagaggaacaaaaatctaaaactcgagaatataatgaacaactaacagaaaatccg
cataatattgaactttggctgcaatacgtcaactttcaggatactctggcctattatcaa
agacaccaattagctaaagatgtgcatcaatctacagtattgaaaaagttatcgattgtt
gaaaaagcacttgagaaaaatacagattctaaggaattattaaaattaaagctacgtttt
atgacagaattaacaccatctgatgaattatcgaatcaattggaagcattagttaataaa
gattcaggaaatattatattatggcagcattttatcatggtcactcaaggttcggtggcg
atgtgtactgtaccaagagtgttggatttgtattcaaagtgtttctgcgttctgagacag
cgcgccagaacaaatccttctgtctacgatacacagttgctgtatatgctgtatcaatgt
ttaactttcctgaggcatacaggattatgggaacaaatgtgggaaacaatacgtttaaat
ctgaatttgaacctgaatttgaacagaactagtttatcctttcgaggatctatagatgaa
aaaaaattaattggaatggaagaaatgatattaatgtcgcgactaccactaaatcaacta
tggcaaaggacagagtcactgagagagaattgtcattggattagcgttagtagagacgaa
ttggaattggttggagattctagaagatttattttgccagaagacgtagcggattttata
cacccaattctttctcgtaattcaaactttcaaatggccatttattctcttttgtgctta
aaagtaccacttctgccttgtcgagactgctacatgaaagaattatcattggaaaacttt
cattggggaatagaatctttagaagtgctgcttccattcatgtaccctatggtaggtgaa
atggctggtcatgaccaaaggaaggaattattgaaggatgttcttgaaggacgtttaacg
tcaggtcctcaatatctcaagttccatccggcgcaggaaccatacttagattttgtacgc
aagatatttcatacaatcgcggaaagtctgtcttcgctgcaacggacaagtatatatgtc
tggtggttgcgattagaaagactattggtttctctcagcaaagacgagcctttaaagcat
gataacaaaggaaagaaattaagggcaacattgaaggaatttttgaaaaagaatgaaaat
agaaataacttgtatttctataaggaatatgccctaatagaattggagatgggcagattc
agcaactgcatgaacattcttgagactgccattcagtctcaagggacatgtccatctgcg
attactgatatgtgtgaaagggcagcgctttttaacgtatatagaacgttcatcgaaacc
ttgcttgatattagaacatataacgagtcgcacagacaatggatactaaaagtctttggt
caaatggtatctagcaaaaacgaaaatcaagaatcactgattgaagagtatttacattcg
tgtgtacaagattttctgcaagtcccttctaatgagaaggaaaaggataccttttttctg
tcgaacttagaatgcgacgcgattgtatgctatgcatatttcctgtatattaaagatgac
gatattcaaactgttgtcaacatattgaagagttgtattgatcattccaaagattatcct
tacttgcaggaaatgttgtacgaaagtcaaattgcaatcctgcaattgcatcatgaacgg
actcagagtatgcagactgtgttaaaagaaactctaagcaaaactttaaatagatatccg
aataacttttatgctttatctgtatttgctggcatagagagtgaattgccgacctggaga
ttcaatagtagaagcactgaaattgaactgtggcgtgctatagcgatgtgcttggcagtt
cgtagacgtattggtcttctaatgaaacttgatcattctgacgcagtgaatgccgcactg
aataagctattatcgtttcatctaacactttccaggataccatcgacccaatgttgtcca
ttgctatggagactgtatatgctccttttgcgcgaacataatttatgcgagaaaaaagga
gaagagatttatcatgagagcgtgacacagtgtccatgggcaagaagcatttacatagac
gcagctgaagtagcgcctcaacttctcactcaaattcaagatgtgatacgcgagaaagaa
ttaagaatgcacgtcacacctgaggaattagatattcttcgtggataa
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