Temnothorax longispinosus: 139818791
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Entry
139818791 CDS
T10889
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
tln Temnothorax longispinosus
Brite
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
139818791
3'-5' decay
Other 3'-5' decay factors
139818791
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139818791
NCBI-ProteinID:
XP_071643797
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Position
9:19326222..19330844
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AA seq
912 aa
AA seq
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MAATELTEHESSVSNGNTPNLTDFPERVRYGWFRSNDPDTTLTCEPLPNVNIYLYGSANC
RVVGKRGNYEWSFTIFTTGGQELQNVALISDDHRANFFLKSVQDKDGTEIGVTNGQEWHS
PCPGSSQENKRQYLVTVGFTAKKHSTYRQDIVFGFLSHPVYLQRICADYLHIKDYERIQK
ATFYQQSQIPPRWKGPYEFYSPFMPHANPRETKLSRIYPYPDRQNFILTQNTLSDNRLTP
RNYRGRMHEMITLEEIARHEQLSRYNQLSWLRLMAHYVLFNSDASTIAKYTPPGELFAQI
PLSREILDDTQSGRLLQRSCNSVLLKLWRKKTKCDVFEAHIEDKSSHSVYVRLSKECVTF
WDLEAHSEVEVEIQFVLSRLNFCEWHLAVDSLEDMDLVFLMDEHHKTDNEIIRDFLQVDA
GNLSILSSLLLDSPLNQEQKQAVTAITLSIKTSSPPVLLLGPFGTGKTFTIAHMLRMLVQ
NKNNRILLCTHSNSAADLYIKEFFHIWYNQDKHPRLKPVRIYYKLRALNTVHPTVQQYCL
MDEHGRFRDPIAADFQDCGLIVTTLATSSCLMNLKLSPTHIVIDEAAQAMECEALIALTL
ANRETRLLLAGDQMQLAPEIYSVLANERGLGVSLLERMYAYYPPEHPCRIHLCQNYRAHA
DIIKYTSETFYDGMVKPANMQLLKHPVMKPLIFYAVNGAEEQATCSTGYHHATEAEEVAN
RVLELRRAWPTQQWGPYNEGSIGVLSYYPEQVQRLRIELRKRLLFDVSVERVLNVQGKQF
TAVFISTVRTRISDRSSAEVKIKDYGFLTDPRLLNTALTRAKCFVAVVGDPVALLTIGCC
KDLWKKYLDVADLYGMDRKELQTHLNQVSKIQISPLNPHAKEFFPRTPPLCFVQYIQVPI
WYPLMYPPQQPM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggaactgacggaacacgagtcgagcgtgagcaatggaaatactccgaat
ctcacagacttccccgagcgggtgcgatatggctggttcagatccaacgatccggacacg
actctcacgtgcgagccgctgcctaacgtgaatatttatctgtacggtagtgctaattgt
agggtcgttggtaagagaggcaactacgagtggagttttacaatctttacgacaggcggt
caagagttacagaacgtggccttgatatctgatgatcatcgagccaacttcttcctcaag
tcagtgcaagacaaggacggcacagaaatcggcgtgacgaacggccaggagtggcacagt
ccctgtccgggcagctctcaagaaaacaagagacagtacctggtgacggtcggtttcact
gcgaaaaaacacagcacgtatcggcaggacatagtttttggcttcctaagtcacccggtg
taccttcagaggatctgcgcagactatttgcacatcaaagactacgagcggatacagaag
gcgacgttttatcaacaatcgcagataccgccgagatggaagggtccgtacgagttctat
tcgccctttatgccgcacgccaatccacgggagaccaagttgtcgcggatctatccgtac
ccggacagacagaactttattctcactcagaacacattgtcggacaatcggctgacccca
cggaactaccggggtcgcatgcacgagatgatcactctcgaggagatcgcccggcatgag
cagctctcgagatacaaccagctttcgtggttacgtctcatggcgcattacgtgctgttc
aacagcgacgcttccaccatcgccaaatacacgccgccgggtgagctcttcgcccagatc
ccactcagtcgagagatcttggatgatacgcagagcggcagactcctgcagcgtagctgt
aatagcgttctactcaagttgtggcgcaagaaaaccaagtgtgacgtcttcgaagctcac
atcgaagataagagctcgcattccgtatatgtcagactgagcaaagaatgcgtgaccttt
tgggatttggaagcgcacagcgaggtcgaggtcgaaatacagttcgtattgagtcgtctc
aacttctgcgagtggcacttggcggtagatagtctggaggatatggacctggtgttcctg
atggacgaacaccacaagaccgacaacgaaattatccgcgactttctgcaggttgacgct
ggtaatcttagtatcctctctagtctacttttggactcgccgctcaatcaggaacagaag
caagcagtcactgcgataacgttatcgattaagacttcctcaccaccagtccttttgctg
ggaccattcggcacgggaaagacattcaccatagcgcacatgctgcgtatgctcgtacaa
aataaaaacaaccgaatacttctgtgtacgcatagcaacagcgccgccgatctttacatc
aaggaattcttccatatctggtataatcaggataaacaccccagacttaaacctgttagg
atatattacaaattgcgtgctttgaacacggtacatccgacggtgcagcaatactgccta
atggacgaacatggtcgtttccgcgacccgattgcagcagattttcaagactgtggtcta
atagtcacaaccctggcaacatccagctgtctgatgaatcttaaactatcgccgactcac
atagtcatcgacgaagcggcccaggctatggagtgcgaggcgttgatagctctgaccctg
gcgaaccgagagacccgcctgctcctggcgggtgatcagatgcaactcgcgccggaaatc
tacagcgtactagcaaacgagcgaggattaggcgttagccttttggagagaatgtacgcg
tactatccgccagaacacccgtgtcggatacatctatgtcagaactatcgcgcacacgcg
gatataatcaagtacacgtccgagacgttctatgacgggatggttaaacctgccaacatg
caactgctcaagcatcccgtcatgaaaccgttgatattttatgctgtcaacggtgcggaa
gaacaggctacatgttccacgggatatcaccatgccacggaggcggaagaggtagcgaat
cgtgtcctggaattgaggagagcgtggccgacgcaacaatggggcccatacaacgaaggc
tctattggagttttgtcatattatcctgaacaagtacaacgattgcgaatcgagttgcgc
aagcgcctgctttttgatgtgtctgtcgagagggtgttaaatgtccaaggcaagcaattc
actgcagtttttatcagcacagttcgaacaaggatatctgacagatcgtccgccgaggta
aaaatcaaggactatggctttttaacggatccacgcttattaaacactgcgttaacaagg
gctaagtgttttgtggcggtcgtaggcgatccagtcgctctgcttactataggttgctgc
aaagatctttggaagaaatatctagacgtggctgatctgtacgggatggaccgaaaagaa
ttgcagacgcacctgaatcaggtttcgaaaatccaaatatcgcctttaaacccgcacgcg
aaggaatttttccctagaacaccgcctttgtgttttgttcaatatattcaagtgccgatt
tggtatccgttaatgtacccaccacaacagccaatgtga
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