KEGG   Temnothorax longispinosus: 139818983
Entry
139818983         CDS       T10889                                 
Symbol
Tex
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
tln  Temnothorax longispinosus
Pathway
tln03013  Nucleocytoplasmic transport
tln03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139818983 (Tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    139818983 (Tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tln03019]
    139818983 (Tex)
   03041 Spliceosome [BR:tln03041]
    139818983 (Tex)
Messenger RNA biogenesis [BR:tln03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     139818983 (Tex)
Spliceosome [BR:tln03041]
 Complex C
  Other components
   EJC/TREX
    139818983 (Tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    139818983 (Tex)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st RMC1_N WD40_MABP1-WDR62_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N PD40 NBCH_WD40 B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR75_1st Peptidase_S9_N Beta-prop_EIPR1 Beta-prop_Nup120_160 vWF_A Cytochrom_D1 PROPPIN DPPIV_N NAGLU_N
Other DBs
NCBI-GeneID: 139818983
NCBI-ProteinID: XP_071644182
LinkDB
Position
9:5261107..5263302
AA seq 320 aa
MASSRVEELINYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPDRL
KQETTFRGHGGSVDQLCWHAFSPELLSTASGDKTVRIWDTRTQKCTANISTRGENINISW
SPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVHIL
SYPELELLHVIKAHPGTCICIEFDPTGQYFAIGSADALVSLWDADELCCLRTFSRLEWPV
RTISFSYDGQLLAAASEDLVIDIGEVQTGEKIADVPVEAATFTVAWHPKQYLLAYACDDK
DSYDRKRDAGSLKVYGFAND
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcctcttcgcgtgtggaagagctaattaactattttaagtcgcacaacaaaatccgg
gagcagcagagccactcggcgaaggtgcacagcgtgggatggagctgcgacggcaaatac
ctggcctcgggctccttcgacaagtccgtttgcatattctcgctatgcccggatcgcttg
aagcaggagacgacttttagaggacacggcggcagcgtggaccagttgtgctggcacgcc
ttctctccagaattattatccacggcaagtggcgacaagacggtacgcatctgggatacg
aggacgcagaaatgcacggcgaacatcagcaccagaggggagaacatcaacatatcgtgg
tcgccggacggtaacacgattgccgtgggaaacaaggaagacctggtgacgttcatcgac
gcccgggtgatgaaaatacgcgcggaggagcagttcaacttcgaggtgaacgagatctcg
tggaacaaggactcggacacgttttacttaaccaacggccagggctgcgtgcacatactc
agctatccggagctggagctgttgcacgtgatcaaggcgcatcccggcacgtgcatctgc
atcgagttcgacccgaccggccagtatttcgctatcggatccgcggacgcgctggtctcc
ctgtgggatgccgacgagttgtgttgcctgaggacattctcgcgactggagtggccggtc
aggaccatctccttctcgtatgacgggcagctcctagcagcggcctccgaggacttggtc
atagacatcggtgaggtgcagaccggcgagaagatcgccgacgtcccggtagaggcagcg
acattcactgtcgcgtggcacccgaaacagtatctcttagcttacgcgtgtgacgataag
gactcgtacgaccggaaacgcgatgccggtagcttaaaggtatacggtttcgcgaatgat
tga

DBGET integrated database retrieval system