Temnothorax longispinosus: 139819046
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Entry
139819046 CDS
T10889
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139819046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139819046
Spliceosome [BR:
tln03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139819046
Complex C
U4/U6.U5 tri-SnRNP related factors
139819046
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
139819046
NCBI-ProteinID:
XP_071644282
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Position
9:complement(7470135..7474922)
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AA seq
394 aa
AA seq
DB search
MQVQEAEGADGSPWNNSSGCDEERRPAQKEGKKSNVLPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGVRGVGAGGIVSTAYC
LLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYISTVTIRYTQPPADLFSWYSDYLEDE
EELDVKAGGGQMMKMGDILKQFLTKLEWFSTLFPRIPVPIQKDLELRLAERFPQQQVNAR
NAKPPITLNSHGKYGNKDGRKDNGNLTARNQQPRHIPDNEAQWGEAERMSQWRARTDEDR
KDKNRERDRERERLRERDRERARERERDRHGRRSSSRDRNRRQRDYKSRSRDRSHRDRSR
DRNRDRDRHHRRGSPYDYAAELVRERERQRRERE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcaggaggccgaaggcgcggatggatccccgtggaataactcgagtggctgc
gatgaggaacgtagaccagctcaaaaggagggtaaaaagtcaaatgtgttgccactttgg
ggcaatgagaggactatgaatttgaatcctttgatcctcaccaatatacagtcgtcacat
tatttcaaggtgaatctgtatgaactcaaaacttatcatgaggtgatcgatgagatctat
tataaggtctctcacctagaaccatgggagaaaggcagcaggaagactgcgggccaaacc
ggcatgtgtggaggcgtacgaggcgtgggagctggcggaattgtttccacggcatattgt
ctactgtacaaactcttcacgctgaggctaaccaggaagcaactgaatgggctcattaat
catccggactcaccctacatacgcgctttaggatttatgtatattagtacggttacgatt
agatacacacagccaccggcagacttgttcagctggtacagcgactatctggaggacgaa
gaggaattagatgtgaaggcgggcggcgggcaaatgatgaaaatgggcgacattctcaaa
caattcctcaccaaactcgagtggttctccacgttgtttccacggataccagtaccgatt
caaaaggatttggagctgcgattggccgagcgttttccgcagcagcaggtgaatgcgcga
aacgctaaaccgccgattactcttaatagccacggcaagtacggcaataaagatggccgt
aaggataatggtaatttgaccgcgcgtaaccagcaaccccgacatatccccgacaacgag
gctcagtggggtgaggccgagcgtatgagccagtggcgtgccagaaccgacgaggatcgt
aaggacaagaatagagagcgcgatcgagagcgcgagaggttgcgggagcgtgacagagaa
agagctcgcgaacgtgagagagacaggcacggtagaaggtctagcagtcgtgatagaaat
agaagacagagggattataaaagtcgcagcagagacaggtcacacagagatcggagcagg
gatcgcaatcgcgacagagaccgacatcacagaagaggctcgccgtatgactacgccgca
gagttagtacgcgagcgcgagaggcaacgaagggaaagagaataa
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