Temnothorax longispinosus: 139819337
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Entry
139819337 CDS
T10889
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
tln Temnothorax longispinosus
Pathway
tln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139819337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tln03036
]
139819337
03400 DNA repair and recombination proteins [BR:
tln03400
]
139819337
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139819337
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139819337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
139819337
NCBI-ProteinID:
XP_071644690
LinkDB
All DBs
Position
9:complement(4868433..4874115)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAEISNNDGSASCLVDDSGNMLNNFLNNLPEIVSVKTEDSILQKVSEHIRCTATKSNDEI
QENDVELNTEGNVEANGKEDHRAELQKQVEIGEITPFEAVFKQSTLEQKEGTINKGAQSF
DLEKYFKQQAALAEQKKKLKKPSKAPSDKDYSPPVKKTKLPSTDAKVNKKCQKSRHENSK
DGTPQSIDKADSNVAIVDSSSESEYIPSDDELDFDVEDKASKRRKTAVKSGYTRIKRTRD
DGDNQLFKQRVETNTYPKDEAMHEINTLFKVPLCIWEKLYRYQRIAVQWLWELHGRKLGG
LLSDEMGLGKTVEVIAFLAGLDCSELLSHNGRYRGLGPTIVVCPATLMEQWVKHFHEWWP
FFRVVVLHHSSGYNGDPESLIESLQTGGILVTSYNGVLKHKDLLVSSQWHYVILDEGHKI
RNPQAKVSQAVKRLSTPHRLLLSGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCAAPI
TRGGYANATPLQEATALQIATMLKNTITPYMLRRTKTDVKHHLTLPEKNEQVLFCSLTDE
QKKLYKRYLGSDDVSFVLHERNNRQDSGRYRARFLIALSALRKICNHPDLFLYTREQDSD
EDIDLSEEHLEKFGYWKRAGKMTVVRSLLKIWQKQGHRVLLFTQGRQMMHVLESLLQNER
YTYLRMDGTTVMSQRQQTIHKFNNDTSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPA
TDAQARERAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLDDPRQRRLFKTT
DLVELFNLNEPIDGEFSESDRLFRESKYTPVSGGFSLSKIEEMKKLASILSKKISANVSK
RDENENANSTCERKSNEENDNSSRVEAPAVENDSLVDQSLSSDRNNTQKTPSKPNEDFNT
NSDATIERNSNIENENTLKKNNCEQDVIPVRSPNNSSVEKQSNLNDNKIKSSSTRKHKKH
KRDSHSGKTNVSAIFEGERVSCLIGRRLGRSDEKEESVSTADDDYVLRKLFAKSTVSSAF
KHEAVLSNACHNSGSENAMQRFARESAQESMDFIHQSGKHCWRPA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcagagataagcaataacgacggtagtgcgtcctgtcttgttgacgactcaggaaac
atgttaaataattttctaaataatctaccagagatagtgtctgtcaaaacggaagacagc
attttgcaaaaggtatcggagcacattagatgtactgctacaaaatcaaacgatgaaata
caagagaatgatgtcgaattgaataccgaagggaatgtcgaagctaatggcaaagaggat
catagagcagagttacaaaaacaggtcgagattggagagattactccgtttgaagcagta
tttaaacagtcgactttggagcaaaaagaagggactatcaataaaggtgctcaatcgttt
gatcttgagaagtactttaaacagcaagctgctcttgccgagcaaaagaagaaattaaag
aaaccatctaaggcaccttctgacaaagattattcaccgccagtcaaaaaaacaaaatta
cctagtactgatgcaaaagtaaataaaaaatgtcaaaagtccagacatgagaacagcaaa
gatggtactccgcaaagtatagataaggcagactccaatgtagcaattgttgacagcagt
tcggaaagcgaatacattcctagtgatgatgaactggatttcgacgtggaggataaggcg
tctaaaagaagaaaaactgcagttaaatcaggatatacccgcataaaaagaactcgggat
gatggagataatcaactattcaagcagagggtggaaacaaacacctatcccaaagatgaa
gcaatgcacgaaattaatactctctttaaagtgccgctatgcatttgggaaaaattatat
aggtatcaaaggattgcagttcaatggctttgggaattacatggtcgtaaattaggaggc
ctgttgagtgacgagatgggattaggaaaaactgtggaagttattgcattcctcgcgggt
ttggattgtagcgaattgctctctcacaacggaaggtacaggggattaggcccgactata
gttgtatgtcctgctactttaatggagcaatgggtgaagcattttcacgaatggtggcct
ttcttcagagttgttgtgcttcatcattctagtggttacaatggtgatccagaaagcttg
atagaatccctacaaactggcggcatacttgttacttcttacaacggagtcctcaaacac
aaagatttgcttgtgtccagtcagtggcattatgttattctagacgaaggccataagatt
cgtaatccacaagcgaaggtgagccaagcggtgaaacgattgtcgacaccgcatcgatta
ctgttgagcggtagtccgatgcagaattctttgaaagaactatggtctttgttcgatttc
attctgcctggcaaactaggcactctgcctgtatttctggaacattgcgcggctcctata
acacgcggcggttatgcgaacgctacaccgttacaggaagcaacggccctccaaatagcc
actatgttgaaaaatactatcacgccatacatgcttcgaagaacaaagaccgatgtgaaa
catcatcttaccctaccggagaaaaatgagcaggtgttattttgcagcttaacggatgag
cagaagaaactgtataaaaggtatctgggctccgatgatgtgtcctttgttcttcacgag
agaaataatcggcaagacagtggaagatacagggcgaggtttctcattgccttgtcagca
ttgagaaagatatgcaatcatccggacttgtttttgtacaccagagaacaagattccgat
gaagatatcgatttgtccgaagaacacttagagaagttcggttattggaaacgtgctgga
aaaatgaccgtggttcgatctcttctgaaaatctggcagaagcaaggacacagagtgctg
ctttttactcagggaagacagatgatgcacgttttggagtctcttttgcaaaatgagagg
tatacttatttgagaatggatgggacaacagtaatgtctcagcggcagcaaacgattcac
aaatttaacaatgacacatcgtatttcgtgttcctgctgacgacgcgcgtaggaggtctg
ggagtaaatctgactggtgcgaatcgagtgattatttacgatcccgattggaatccagca
acggacgctcaagcgagagaacgtgcgtggagaataggccaaaataaacaagtcactatc
tatagattaattaccgctggtacgatagaggaaaagatgtaccacagacagattttcaag
ctattgctttcaaacaaagttcttgacgatccgcgccaacgacgtctattcaaaacgacg
gatctggtggagttattcaatctaaacgagccgatagacggcgagttttctgaatcggat
cgcttatttagagaatctaaatatacacctgtgtccggtggcttttctctcagtaagatc
gaggagatgaaaaaattagcgtcgattctcagcaagaaaataagcgccaatgtatcgaaa
cgcgatgaaaatgaaaatgcaaacagcacttgcgaaagaaagtccaacgaagaaaacgat
aattcgagtcgtgtcgaagctcccgccgtggaaaatgattcgcttgtggaccaaagctta
tcttccgatcggaacaatacacaaaaaacgccgagcaaacctaatgaagatttcaatacg
aattccgatgcaaccattgaaagaaatagcaatatagaaaatgaaaacacattaaaaaaa
aacaattgtgaacaggatgtaattccagtgagatctccaaataacagttctgtagaaaag
cagagtaatttaaatgacaataaaatcaagtcatcgtctactcgtaaacacaagaagcac
aaaagggactcgcattcgggcaagacaaatgtttccgcgatctttgagggagaacgtgtt
tcttgtctgatcggtcgtcgcctgggacgttccgatgaaaaagaagaatcagtttcgaca
gcagacgatgactacgtcttgagaaagctattcgccaaatcaactgttagctcagccttc
aaacacgaagcagtgttatcgaatgcgtgtcataatagtggcagtgagaacgcaatgcaa
cgtttcgcacgtgaatcggcgcaagaaagtatggacttcattcatcaatcgggaaaacat
tgttggagaccagcgtag
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