Temnothorax longispinosus: 139819502
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Entry
139819502 CDS
T10889
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139819502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139819502
Spliceosome [BR:
tln03041
]
Complex B
Other components
Prp19-related factors
139819502
Complex C
139819502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA
UvrD_C_2
AAA_22
AAA_16
PhoH
nSTAND3
RecA_N
DnaB_C
ATPase
Motif
Other DBs
NCBI-GeneID:
139819502
NCBI-ProteinID:
XP_071644983
LinkDB
All DBs
Position
9:complement(19913829..19937324)
Genome browser
AA seq
1445 aa
AA seq
DB search
MENAPPIKSNNPAPTVEQINADRLTQLANKYWAPHTTNTHLAFDSQVVDEIYVQEICASK
FSVRRIMMLEFSQYLENFLWPNYNAETATRQHTMSIVVMVNEKFRERVQVWEAFEKNPTQ
FAGFFQKVLEACLEESIMDFNLKEQTALIVFLNHCFNSMEVSLVREEAKRLVSLSMWISL
QQGRRELEFRKYPKWRKYWKVIRKKDNPERKEKLEWERKFLHRLMIKFMTILETISAEGS
VLPDKVRYCERFLELVIDLEALLPTRRFFNTVMDDNHLVVRCQLSNLLHRPEGSLFGQLL
EMLKFYARFEISEETGNPLTDHDMTELHYAKITSLQNAVFAKFPDLRSFALANVASVNVR
DALYKHFGSLSQEKLRSIASYLNLVPPTEREEYENWYRLDIEFLRELLISRHERRPSQLE
ELNEMPLYPTEDIIWNESIVPTEYFSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTY
EIRQDIEDAVSRLSPWRAEDGGVYFGGWARMAQPITQFAVVEVAKPNVGENRPSRVRADV
TINLSVRKEIKSEWENLRKHDVCFLITVKPPNPIGTKYSHKLPFVPQVGLTTVRGCEVEG
MLDSNGRVIEDGPEPRPILPGDSRTYRVWLDCNQYRIDMDNASHGGEDVYEGFNIIMRRK
PKENNFKAVLETIRELMNTECVVPDWLHDIILGYGDPGAACYSRMPDEIATIDFNDTFLD
IDHLRASFPQYECKTRPEDEGNLVRPFQLTFEDVHAKHNDEPIKKIITVKPHVPPSRGPY
RANEPKKNQIPFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNLYHNFPNQRTL
IVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVNYVLAKRLDLLL
EVQRLQESLNVKGDVAYTCETAGYFFMYQVSTRWDRFQTRVKQKQHTNEKSDLSAIVDEE
FPFHKFFDNAPQPLFKRNSFDEDLKIACSCFRYIERIFAQLEEFRAFELLRSGLDRSKYL
LVKEAKVIAMTCTHAALKRRELVDMGFKYDNILMEESAQILEIETFIPLLLQNPQDGYNR
LKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFARFVRLGVPTVDLDGQGRARPSICNLY
NWRYKKLGNLVHVERSPEYLVANAGFLYDFQLVNVEDFNGVGESEPSAYFYQNLAEAEYC
VAVFMYMRLLGYPADKISILTTYNGQKHLIRDVINIRCANNPLIGRPNKVTTVDKYQGQQ
NDYILLSLVKTRAVGHLRDARRLVVAMSRARLGLYVFARVSLFKNCFELTPAFDQLMQRP
LKLQLLPQELYPTERPNDAVPSTPPMEIEDMPHMAKFVYDYYMEKVSGMKGSQKMWQKPG
TVQTMGSPTHKIPAHPGADDDTDDEEEVSQDNAEIKESKEEVAEKKYEPIKNLIEDPPSD
GENDR
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcaccgcctatcaaaagcaacaatcccgctcctacggtggagcagatcaac
gcggacaggctcacccagcttgcgaacaagtactgggcgccgcacaccacaaacacgcat
ctggcgttcgactcccaagtggtggatgagatttacgtgcaggagatatgcgcgtccaag
ttttccgtccggaggatcatgatgctggagttcagccagtatctggagaatttcctctgg
ccgaattacaacgcggagaccgccacgcggcagcacaccatgtccatcgtcgtcatggtg
aacgagaagttcagggagcgggtgcaagtctgggaggcgtttgagaagaatccgacgcag
ttcgccggattctttcagaaggtcctcgaggcgtgcctggaggaatctataatggacttc
aatttgaaagaacagacggcattgatagtgttcctgaatcattgcttcaactccatggag
gtgtccttggttcgggaggaggccaagagactggtgtccctgtccatgtggatctccctg
cagcaaggcaggcgggaactcgaatttagaaagtatccgaaatggaggaaatattggaaa
gttataaggaagaaggataatcccgagcgtaaggagaaactcgagtgggaacgcaagttc
ttgcataggctcatgataaaattcatgacgatattggaaacgatttccgcagaaggaagt
gtacttccggataaggtacgttattgcgagagatttttggagctggtcatcgacctcgag
gctttacttcctaccagacgtttcttcaacactgtcatggacgacaatcatctggtggtg
cgttgccagttatctaatctgctgcatcgtccggagggaagtttgttcggacagctcctg
gagatgctcaagttctacgcccgattcgagatcagcgaggaaaccggcaatcccctgacg
gatcacgacatgacggagttgcattacgctaaaattacatctcttcagaatgcagtcttc
gcgaaattcccggatctgagaagctttgcactggccaacgtagccagcgtgaacgtcaga
gatgctctgtataaacacttcggttcgctcagtcaagaaaaattgaggtccatcgcgagt
tatttgaatttggtgccgcccacggagcgagaagagtacgagaattggtaccgcctggat
atagaatttttgcgcgaactgctgatatcgcgacacgagcgtaggccgtcgcagcttgaa
gagctgaatgagatgcccctctacccgaccgaggacatcatctggaacgagagcatcgtc
ccgaccgaatatttttctggcgagggctgtctggctctgccaaaattgaacctgcagttc
ctcacgttgcacgactatctgctacggaatttcaatctattccgcttggaatctacatac
gaaatacgacaagacatcgaggatgccgtgagcagactgagtccttggcgagcggaggac
ggcggtgtctacttcggcggatgggccagaatggctcaacctatcacgcaattcgcggtg
gtcgaggtggctaagcctaacgtcggcgagaacaggccatcgagagtccgtgccgatgtg
acgataaacctcagcgtccgtaaggaaattaaatccgaatgggaaaatcttcgcaagcac
gacgtgtgctttctcatcacagttaagccgccgaatcctatcggcactaaatacagtcat
aagctccccttcgtgccacaagtgggtttaacgacggtgcgggggtgcgaagtcgagggt
atgctcgactcgaacggtagagtgatagaggatggccccgagccgaggccgattctacca
ggcgattcgcgcacctatagagtgtggctggactgtaatcaataccggatcgatatggac
aacgccagccatggcggcgaggatgtatacgagggatttaatatcataatgaggcgtaaa
cctaaggagaacaacttcaaagccgtgttagagactataagggagctcatgaatactgaa
tgcgtcgtgcccgactggttgcacgacataatcctcggatacggcgatccgggtgcagca
tgctattctagaatgccagatgaaatcgcgacgatagacttcaacgatacattcctcgat
atcgaccatctacgagccagttttcctcagtacgagtgcaaaacgaggccggaggacgaa
ggaaacctggtgcggccgttccagctgactttcgaggacgttcacgcaaagcacaacgac
gaaccgatcaagaagatcattacagttaaaccgcacgtgccacccagtagaggtccatac
agagcgaacgaaccgaaaaaaaatcagattcccttcacgccgacgcaagtcgaagctata
cgagctggaatgcagccaggtctgacgctggtcgtcggcccgcccggtaccggcaaaacg
gacgtcgctgtgcaaatcatctcgaatctatatcataattttcccaatcagagaacgctg
atcgtgacgcactccaatcaagcgctcaatcagcttttcgagaagataatggccctcgat
atcgacgagcggcatctgctgcgtctcggtcatggagaggaggctctggagacggaaaag
gacttcagtcgctatggcagggtcaattacgttctcgccaaacgtttggatctgctcctg
gaagttcagagattacaggaatccctgaacgtgaagggcgacgtcgcgtacacgtgtgaa
acggcgggttacttcttcatgtatcaagtgtccacgagatgggaccgtttccagaccaga
gtgaaacaaaagcagcacacgaatgagaagtccgatttatctgctatagtcgacgaggag
tttcccttccacaagttcttcgataacgccccgcagccgcttttcaaacggaattcgttc
gacgaggatctcaagattgcgtgcagttgctttagatacattgagaggatattcgcacaa
ctggaggagtttcgtgctttcgaattactgcgatcgggtctcgataggtcgaaatacttg
ctcgtgaaggaggctaaggtgatcgctatgacctgtacgcacgcggcgctcaaacgtcgc
gagctcgtcgacatgggtttcaagtacgacaatattctcatggaggagtccgcgcagatc
ttggagatcgagactttcataccgttgttgctacaaaatccccaggatggatataatcgt
ttgaaacgttggataatgataggcgaccatcatcagctgccgccggtcatcaagaacatg
gccttccagaaatactcgaacatggagcaatcgctgttcgcgagattcgtgagactgggc
gtacccacggtcgatctcgacggccaaggtcgcgccagacccagcatatgcaatctctac
aattggcgctataagaaactgggcaatctggtgcacgtggaacgcagccccgagtatctg
gtagcaaacgctggtttcctgtacgatttccaactggtgaatgtcgaggatttcaacggc
gtcggcgagagcgaacccagcgcctacttctatcagaatctcgccgaagccgagtattgc
gtcgcggtgtttatgtacatgcgcctgctgggatatccggcggacaagatcagtatccta
acgacatataacggtcagaagcatctgataagagacgttataaacatccggtgcgcgaat
aatcctttgataggccgaccgaacaaagtgacgactgtcgataagtaccagggtcagcaa
aacgactacatcctgctgtctctggtgaagacgcgcgcggttggccacttgagagacgcg
aggcgtctagtggtggcgatgtctcgtgcccgcctcggtctctacgtcttcgctcgcgtg
tccctcttcaagaactgtttcgagctgacaccggccttcgatcaattgatgcagagaccg
ttgaagctgcaactattgccacaggagctctatcccaccgaacgaccgaacgacgccgta
ccctcgacacccccgatggagatcgaggacatgccgcacatggcgaagttcgtttacgat
tattacatggaaaaagtcagcggaatgaagggatcgcaaaagatgtggcagaagccggga
accgtgcagacaatgggtagtccgacgcataagattcctgctcatccaggtgccgatgac
gataccgacgacgaagaggaagtcagtcaagataacgctgaaattaaagaatccaaggaa
gaagtggcggagaagaaatacgagcctataaagaatttgatcgaagatcctccgagcgac
ggcgaaaacgaccgctga
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integrated database retrieval system
