Temnothorax longispinosus: 139819554
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Entry
139819554 CDS
T10889
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139819554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139819554
Spliceosome [BR:
tln03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139819554
Complex C
U4/U6.U5 tri-SnRNP related factors
139819554
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
MG280
DUF688
Exonuc_VII_L
C2H2-zf_KIN17
zf-C2H2
DUF5034
SNRNP27
MauJ
Vfa1
Motif
Other DBs
NCBI-GeneID:
139819554
NCBI-ProteinID:
XP_071645096
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All DBs
Position
9:4195797..4197930
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AA seq
197 aa
AA seq
DB search
MSMRPDDHRRKWNREEYERIALQRLQDEIAEEDLGIPKQPAVKRELLKQRDYKVDLESKL
GKSVVINKNTPSSQTGGYYCNVCDCVVKDSINFLDHINGTKHQRNLGMSMKIERSSLEQV
KARFAQNKKKLEEKKKDYDLEQRVKELKEEEEKIKEYRKEKRKDKKRKIEELNEDDAGPS
DEMAAIMGFSGFGSKKK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcgacctgatgatcaccgaaggaaatggaaccgcgaggaatatgagaggata
gcacttcaaagactccaagatgagattgcggaggaagacttagggattcccaagcagcca
gcagttaaaagggaattgttgaagcaaagagattacaaagttgatctcgaatctaaacta
ggaaagagtgtggtcatcaataaaaatacgccctcgtcgcaaaccggagggtactactgc
aatgtttgcgactgtgttgtcaaagattcaatcaatttcttggaccatatcaatgggaca
aaacatcaacgtaatctgggcatgtccatgaagatagagcgatcttcattggagcaagtt
aaggccagatttgcgcaaaacaaaaagaagctcgaggaaaaaaagaaagattatgatttg
gagcaacgagtaaaagaactgaaggaagaggaagaaaaaatcaaagagtacagaaaggag
aagcgaaaggataaaaagagaaagattgaggaactcaacgaggatgatgcaggaccttcc
gacgagatggccgcgatcatgggattctctggatttggctcgaaaaaaaagtga
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