Temnothorax longispinosus: 139819621
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Entry
139819621 CDS
T10889
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tln Temnothorax longispinosus
Pathway
tln03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139819621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tln03009
]
139819621
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139819621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
Svf1_C
Motif
Other DBs
NCBI-GeneID:
139819621
NCBI-ProteinID:
XP_071645206
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Position
9:complement(4156735..4159717)
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AA seq
524 aa
AA seq
DB search
MTSFKKINTKVFARTGPELTEDNIYWKKYTPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSRFKEAAYGGCFRRDGKLLCVGGEEAVVRLFNISSNSMLRIFSG
HKAAVHRVFFTADDLHIASFSDDKTVALWDIPSEKQLISFNEHTDYVRAGAVSPVSTDVL
LSGGYDKIVNMYDARTNKKIFSVNHDAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
LAKITQHHKTVTCLKIASNGHRILSGSLDRHVKVYDAGTYKTLHALDYPNAVLSIGISAE
DETVVAGMVDGLISVRRREEDAKDVIKPKRKKVSYRHAGENLHVRSIDVVVHQEVKEIMS
KHDACLRKFQYSKALDCVMMNYVVNKTPHVTVALTQELIRREGLRRALAGRNGKSLVNII
KFLNKYIGNIRFGRVLSHVANVLLDVYEDHLDELSEETRKMFAILSQKLQEEEQLILALT
QLQGSMQIILSGAETSSLPVIKENQSLEPSNAAQTERDIILNIG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttcaagaaaataaataccaaagtcttcgccaggacaggaccggaattaacc
gaagataatatatattggaagaaatatacgccaccagttttgataaaggaatttggtccg
atagactacattgacttctcgccagtggagccacattacttcgcaacaacctgctcggta
cgagtgcaactgtataatcctatcaccaagttggccacaaagacttacagcaggttcaaa
gaggccgcgtacggagggtgctttcgtcgagatggcaaactattgtgcgtgggtggagaa
gaagcggtggtcaggctctttaatatcagttcgaacagtatgttgcggatcttttccgga
cacaaggccgcggtgcaccgagttttcttcacagccgacgatcttcacattgcctcattc
tcggacgacaagactgtagcgttatgggatatacctagtgagaaacaattgataagtttc
aatgaacatacggattacgtcagagctggcgcagtgagccccgtgtccaccgatgtgtta
ctatccggcgggtatgataagatcgtaaatatgtatgacgccaggacgaataagaagata
ttcagtgttaatcacgacgcaccggtggaaagtttgctcttcttgcccactggaggaata
ttcctgtctgcaggtgggacagacatcaaagtatgggatgctctcgcgggtggcaaattg
ctcgcgaaaatcacgcaacatcataagactgtaacttgcctgaaaatcgcttctaatggt
catagaatattgtctggttcgttggacaggcacgttaaagtttatgacgctggaacatat
aaaactcttcatgctttggactatcccaatgcggtcctcagcataggaattagtgcagag
gacgagaccgttgtagccggtatggtagatggcctgatttctgttaggaggcgcgaagaa
gatgcaaaggatgtaataaaaccgaaacgcaagaaggtgtcgtacaggcacgcgggcgaa
aatttgcatgtacggagtatcgacgtggtcgtgcatcaagaagtcaaagagataatgagc
aagcatgacgcctgcttgcgaaagtttcaatatagtaaagcgctggattgtgtcatgatg
aattatgtggttaataaaacgccgcatgtcaccgtggcgcttacgcaggagctcatcagg
cgtgaaggcttaaggcgagctttggccggtagaaatggcaaatccttagttaacattatt
aaattcctgaacaaatacatcggcaacattcgttttggaagagtattatcgcacgtagcg
aacgtattgttagatgtgtacgaagaccatttggacgaactgtcagaggaaacacgaaaa
atgtttgctatactgtcgcaaaagttacaggaggaagagcagttgattttagctttgacg
caattgcagggttcaatgcaaattatattatctggtgccgaaacgtcttctttgcctgtt
ataaaagagaatcaaagcttggaaccatcaaacgccgctcaaacggaacgtgatattatc
ttaaatattggttaa
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