Temnothorax longispinosus: 139819696
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Entry
139819696 CDS
T10889
Symbol
Tomosyn
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139819696 (Tomosyn)
Membrane trafficking [BR:
tln04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139819696 (Tomosyn)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139819696 (Tomosyn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_WDR19_1st
Synaptobrevin
PEP5_VPS11_N
Lgl_C
Beta-prop_NUP159_NUP214
KNTC1_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
139819696
NCBI-ProteinID:
XP_071645372
LinkDB
All DBs
Position
9:13443781..13484816
Genome browser
AA seq
1361 aa
AA seq
DB search
MKKFTIKGVLDGFRSSVPQPVKPDQEIVENLKPEHFQVKKTFRHGFPHQPTALAFDPIQR
LLAIGTKSGSLRILGRPGVDAHVKHEECAAVLRLQFLINEGALVSVTEDDTLHLWNFRQK
IPQVVHSLKFQRDRITCIHLPLQSKWLYIGTDRGNVHILHIETFVLSGYIINWNKAIEVS
RKTHPGAVVHLSDNPLDLSKMLIGFSTGQIVLWDLKTKTVEYRCQTDDLLTSISWHHEGK
QFMCSHSDGSLTTWTLRQLKPSVTFPHAKFTKDGEPERCKAIQKVEWKMSRSGEAYVIFS
GGLAQDTTGRTPSITVIHGKTTTVLEMEHNVVDFITLCDSPWASDFQDPYAVVVLLQNDL
VVIDLLTTGFPCFENPYPMDIHESPVTCCAYFADCPSDLVPAFYSVGSKSHKKTGFSEKE
WPISGGEWSSSSSSYNEIILTGHADGSIKFWDASAGTLQVLYKLKTAKLFEKTKTRSIDS
EEDPLAIQLIFLCPESRKLAIAGSGKHVVLFKFKRVESMSEVVTLEICLSVEPGREGDNS
PDRESPATGNIVGNMESKTIEFNHPLKVKTGLQKRPAGFQATLICLTTAPPGELPENITA
LSLNSSYGLLAYGNESGLVIVDIVQKISLVVLNTSDLGSGDPYQRVLRSPKRQDELRREN
EDKARSPSTDQSQRESAMEFEPVVTRVADSIQQVQQQQQCPRNESQTGNSSDKPSVEETT
NESNKAGNISNGDECQKSQGWKGFSLKRQLSKVDLKIKNTFTPSSVSSQNGSSSSGLMQV
PQCQQIGGDTGSQKSSTFYCNINEAASTSRSLSPVESVDSESSLSPESQSPGHESPQTDD
RKQDIQEARSPTETENEKTIMSNDNIGIKTEAVRPMNLSLPEHELKPSRLKYIAKIKQAK
REGRLLSVPNLKFSKNEPTVCDLRCEESTSERATSESFTGNLIRRFSRIDKFDGSFQRSR
SSSMSSLENITTETISCLTFADSYTKKNDTSGMPTLWIGTSLGSVQTVIFNTPAHSERHA
HPVVVSTCNGSTFKLKGCILSMSFLDCNGALIPYSYESWKDESTDGKERNKSQGKCTNSR
MSPSTNTQIGGDNFEDRQFVALVSEKQARVVALPSQNCVYRQQLAETHIVIKAEVTTLKD
NVCLVCYVSNGHITTYSLPSLRPLIDVDFLPLIDLSFQTTKHGIVDPMLTIWGHQLFVNG
DTDQIAKTLCFSNRGHGLYLSSPMEIQKFSVSSEFCGELTEMMGDLFIGHDMPEPPKESF
FKGLFGGGSRSVDREELFGESSGRASRTVAKHIPGPNEAMRERVSCATGEVNMAHQMVVE
RGEKLSQLEDRSARMASEAENFAAGAHGLMLKYKDKKWYQL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcacgattaagggggtgctcgacgggttccggtcgtcggtcccgcagccc
gtcaagcccgaccaggagatcgtcgagaatctcaagccggagcacttccaggttaagaag
acgtttcgacacggcttcccgcatcagccgacagcgttggcattcgacccgatccaaaga
ctgttggcgattggcactaaatccggatcccttaggattctaggcagaccgggcgtagat
gcgcacgtgaaacacgaggaatgtgcagccgttctgcgcttacaatttttaataaatgag
ggagcattggtgtctgttactgaggacgacaccttacacttgtggaacttccgtcagaag
ataccgcaggtggtgcacagcctcaagtttcaaagagacagaattacatgcattcattta
ccgctacaaagtaaatggttgtacattgggaccgatcgaggaaacgttcacatactgcac
attgaaacgttcgttctatctggatatataattaattggaacaaggctatcgaagtatct
agaaaaactcaccctggtgctgtagtacacttgagtgataatccgttagatttgagcaag
atgctcataggattttcgacagggcaaatcgttctgtgggacttaaaaaccaagactgtt
gagtatagatgtcaaacagatgatttattaacatcgatatcatggcatcatgaaggtaaa
caatttatgtgcagtcactcggacggttctcttacgacttggactcttcggcaattaaag
ccaagtgtaacatttccacatgcaaaattcactaaagatggagaacctgaacgttgcaaa
gccattcagaaagtagaatggaaaatgtcgagatcgggagaagcatatgtgatattctct
ggtggattggcacaggacaccactgggagaacacccagcattacagtgatacatggaaaa
actactacggtgctcgaaatggaacataatgttgtagactttataacgctgtgtgatagt
ccatgggctagtgattttcaagacccttatgctgttgttgttttactacaaaatgacctg
gttgtgatagatttgttaactactggattcccttgttttgagaatccataccctatggat
attcacgaatctcctgtgacatgttgtgcatatttcgcggattgtccttcggatttagta
cctgcattttattccgttggatccaagtcgcataagaaaaccggctttagcgagaaagaa
tggcctatctccggtggcgagtggagttccagttctagtagttataacgagattatcctc
actggacatgccgatggcagtataaagttttgggacgcttcagcaggaacattacaagtc
ctttacaaactaaagacggcgaaacttttcgaaaaaactaaaacgcgtagtatagattct
gaggaagatccattagcgattcaacttattttcctttgtcctgaaagtcggaaattagct
attgcgggaagtggcaagcatgtcgtgttgttcaaatttaagagggttgaaagtatgtct
gaagtagtgactttggaaatatgcttatcggtggagccaggaagagaaggggacaattca
ccggatcgtgaatctccggcaaccggaaacatcgtaggaaacatggaatcgaagactata
gaattcaatcatccgctcaaagtcaagacgggacttcagaaaagaccagccggttttcaa
gcgacactgatttgtttgacaacggcaccccctggagaactacccgaaaatataacggcc
ctcagtttaaactcctcgtatggcctattggcctatggaaacgagtcagggttagtgata
gtggacatcgtgcagaagatctccttagtcgtgttgaacaccagtgatcttggaagtggc
gatccttaccaacgcgtcttacgaagtccgaaacggcaggacgaattaagacgagaaaat
gaagacaaggcaagaagtccaagtacagaccagagccagcgagaatccgcgatggaattc
gagccagtagttacaagggtagcggattcgatccaacaagtacagcaacagcaacagtgc
cctcgcaatgagagtcagactggaaacagtagcgataaaccgagcgtagaggaaaccaca
aacgaatccaataaagcgggtaacatttctaacggtgacgagtgtcagaaaagccaaggt
tggaaaggatttagtctcaagagacaactaagcaaggttgatctgaagatcaaaaatact
tttacaccatcctcggtgtcttctcagaatgggagctcgtcatcggggctcatgcaagta
ccccaatgccagcagataggcggcgatactggtagtcaaaagtcttccacgttttactgc
aatatcaacgaagcggccagcacgagtcgttcactatcgccggtcgaaagcgttgactct
gagtcctcgctgtcgccggagagccagtctcctggacacgagagtcctcagaccgatgac
aggaagcaagacatccaagaggctagaagcccaacggagactgagaacgagaaaacgata
atgagcaatgacaatatcggcataaaaaccgaggcagtaagaccgatgaatctgtctttg
cccgaacacgagctaaaaccgtcgagattgaaatatatcgccaagatcaaacaggcgaag
agagagggtcgtttgctctcggtgccgaatctaaaattttccaagaacgagccaaccgtt
tgtgacctaagatgcgaggagagtacttccgagagagctacctccgaatcattcaccggc
aatcttataagaagattcagtcggatagacaaattcgacggctccttccaacgatcaagg
agttcgagtatgtcatccctcgaaaacatcaccacagaaaccataagctgccttacattt
gcggattcttatacgaaaaaaaacgatacaagcggcatgccgacgttatggattggcacg
tctctgggatctgtacagactgttatattcaatacgcctgcccacagcgaacgtcatgct
cacccagtggttgtgtctacctgtaatggatctactttcaaactcaagggttgtatccta
tcgatgtcattcttagattgcaacggcgctctgatcccgtattcgtacgagtcctggaaa
gacgagagcacggatggcaaagaacggaataagagtcaaggaaaatgtacaaatagccgc
atgtcaccgtcgacgaacacgcaaatcggtggggacaatttcgaggacagacaatttgtc
gcacttgtgtcagagaagcaagcgagagttgtggcgttaccctcccaaaattgtgtatat
aggcaacaactggcagagactcatatcgtaattaaggcagaagttacaacattgaaagat
aacgtctgtctagtatgttacgtttcgaatggtcacatcacaacgtacagtttacccagc
ctgagaccgttgatagacgttgattttctacctcttatagatttgagttttcagaccaca
aaacacggcattgtagaccccatgttgaccatatggggtcatcaactctttgttaatggc
gataccgatcagatcgcaaagacgctttgcttcagcaatcgaggccacggtttatactta
tcgtcaccgatggaaatacagaagttctccgtttcgagtgaattctgcggcgaattgacg
gagatgatgggtgatctgtttattggccacgatatgccagaaccgcctaaagagagtttc
ttcaaaggtttattcggtggtggctcgaggagtgtcgatcgagaagagttgttcggtgaa
tctagcggtcgtgcgtcgcgcacagtggcaaaacatattccaggaccaaacgaagctatg
cgagaacgggtctcttgcgcaacgggcgaagtaaatatggcacaccagatggtcgtggag
cgcggcgagaagctgtcgcagctcgaagatcggtccgcgcgcatggcgtcggaggccgag
aactttgcggcgggcgctcacggactgatgctcaagtacaaagacaagaaatggtaccag
ctatga
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