Temnothorax longispinosus: 139819771
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Entry
139819771 CDS
T10889
Symbol
Para
Name
(RefSeq) sodium voltage-gated channel paralytic isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tln04040
]
139819771 (Para)
Ion channels [BR:
tln04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139819771 (Para)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ_SCN5A_C
EF-hand_7
SieB
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
139819771
NCBI-ProteinID:
XP_071645561
LinkDB
All DBs
Position
9:complement(17701913..17750820)
Genome browser
AA seq
2078 aa
AA seq
DB search
MSEDSDSLSEEERSLFRPFTRESLAAIEARIAEEEARQKELQQRRAEGEGGYGRKKKKKE
VRYDDEDEDEGPQPDPMFEQGASIPVRMHNDFPAELASTPLEDIDSFYHNQRTFVVISKG
KDIFRFSATDAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMTATPAIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTHESWIRFNNNESNWYMDEAKNIPLCGNSSGAGQCLPGYTCLQGFGT
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAMREAEEAAIAKENKLAARAAAHEAREAAAAAAA
TEAANQIVKSPSEFSCHSYELFVGQEKGNDDNNKEKMSIRSIESAGDQRHIKQINNNHSA
ANKVRKVSAVPRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCF
VPPGGDRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSH
ASRLSYTSHGDLAFPGIRGIDSIGKQITKQEQILRNRNNKQTTPANGHLTDTNQKTYHFE
TSEEDPMGKTKQQDNPFIEPSQQHTVVDMKDVMVLNNIIEQAAGRQSQTPEQGVSTYYFP
TDDDEEPTFKDKLLAGMFRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIVVN
TLFMALDHHDMDKDMERILKSGNYFFTATFGIEATLKLVAMSPKYYFQEGWNIFDFIIVA
LSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLIIII
FIFAVMGMQLFGKNYTDHVDYFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLV
GDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFI
KWIKRNILAFAKLMRAKLTNQISDQAPGEGPSNSWKEDGIDRDEDLDLADGELDAYRDKK
SAKELNQLEVAIGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQN
EDDTISNKSYGSHKNRAFKDESHKGSMDSLSNGEEKKDASKEDLEQEEELEDECEEGEEG
DIPEVDIIIADEDPLQSDYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRFKTFRLIEN
KYFETAVITMILLSSLALALEDVHLQYRPVLQDVLYYMDRIFTVIFFLEMLIKWLALGFK
KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV
NALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDRNACNT
ENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRELNKQPIRETNIYMYFYF
VFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKA
IPRPRWRPQGIVFEIVTDKKFDMIIMLFIGLNMLTMTMDHYQQSATFSNVLDYLNMIFIV
IFTSECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAK
VGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLD
DVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYL
LSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYD
QLSDFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEDP
VEIEEVKARPDEVGYEPVSSTLWRQREEYCARLIQHAWRKHKQQRLGGPSEESDDPDIDL
CVRQTKVLVESDGYVTKNGHRVVIHSRSLSITSRTADV
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctctatcagaggaagaaagaagtttgttccgtccgttcacg
cgggaatccctggcagcgatcgaggctcgcatcgccgaggaagaggccaggcagaaggag
cttcagcagagaagagcggaaggcgagggaggttatggacggaagaaaaagaaaaaagaa
gtacggtatgatgacgaggacgaggacgaaggtcctcagccggatccaatgtttgagcag
ggagcgtcgatcccggtccgaatgcacaacgattttccagccgagttggcctccacacct
ctcgaggatattgatagcttctaccacaatcaaaggaccttcgtcgtcattagcaaggga
aaggatatattcagattctcagcgacggacgcgatgtggatgctcgacccgttcaatcct
atacggcgggtggccatatatatattggtccatccgctcttttccctcttcatcatcact
acaatattggttaactgtatactcatgatcatgaccgccacgcccgccatcgagtccacc
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaacctgcgcgatgtgataatcctgacgatgttctcc
ctctccgtctttgcgctgatgggtcttcagatttacatgggggtcctcacgcaaaaatgt
ataaagaactttcctgaggacggctcctggggtaatctcacccacgagagttggattcga
ttcaataataacgaaagtaattggtacatggacgaggctaaaaatatacccttatgtgga
aattcatcgggggcggggcagtgccttcctggatacacgtgtttacaaggattcggtact
aatccgaattacggttacacgagtttcgacactttcggttgggcattgctctctgccttt
cgtctcatgactcaggattattgggagaatttgtatcaactggtgctaagatcggccgga
ccgtggcacatgctcttcttcatcgtgatcatcttccttggatccttctatcttgtcaac
ttgatcctcgctattgtcgcgatgtcgtacgacgagttgcagaagaaagcggaagaggag
gaggctgccgaggaagaagctatgagggaagccgaggaagctgcaatagcgaaggagaat
aagctcgcggcgagggctgcagcgcacgaagcgcgcgaagcagcggcggccgccgccgcc
acggaagctgcaaatcagatcgtcaaatccccgtcggagttctcgtgtcacagctacgag
ctattcgtcggccaggagaagggcaacgacgacaacaataaggagaagatgagcatacgt
tcgatcgagtccgccggcgatcagaggcacatcaagcagatcaacaacaaccacagcgct
gccaataaagtgcggaaagtcagcgccgtccctcgcgccgctaatggccagtttacttat
gcctaccaggaaagcctgcggaaggcgagcctgagcctacccggctcaccgttcaatcta
cgccgcagcagccgtggcagccaccaattcacgatacgcaatggtcgtggccgatgcttc
gtaccgccgggcggtgaccggaagcccctcgtgctgtcgacgtacttggacgcccaggaa
cacctgccctacgccgacgactcgaacgcggtcacaccgatgtccgaggagaacggtacg
atcgtggtgccggtgtactacgcgaatctcggctcgcgtcactcgtcctacacttcgcac
gcctcgcggctctcctacacatcccatggtgacctagccttccccggtatccgcggcatt
gacagcatcggcaagcagatcaccaagcaagagcagattctcaggaatagaaacaacaaa
cagactacgccggccaatggccatcttacggacaccaatcagaaaacttatcatttcgaa
acttccgaggaagatcccatgggcaagaccaagcaacaagacaatccgtttatcgaaccg
tctcaacagcacaccgtggtcgacatgaaggatgtaatggtgctgaacaacataatcgag
caagccgccggtcgccagagccagacgccggaacaaggagtttcgacctattactttccg
acagacgacgatgaagaacctacgttcaaggacaagttattggccggaatgtttcgttgt
atcgacatcttttgcgtctgggattgctgctggctttggctcgagtttcaaaagtacgtg
tccctattggtctttgatccgttcgtagagctctttatcacactctgcatcgtcgtcaat
acgctcttcatggcattggatcaccacgacatggacaaagatatggaaagaatactcaag
tctggcaattacttcttcacggcgacgttcggtatcgaagcgactctgaagctggtagcg
atgagcccaaaatattattttcaagagggctggaatattttcgattttatcatcgtcgct
ctttcacttttggagttgggtctcgaaggtgtacaaggcctgtcagtattacgatcattc
agattgttgagagtgttcaagctggctaaatcgtggcctacgttgaatctgctgatctcc
atcatgggcagaacggtgggcgcgttgggtaatctaacgttcgtgttgatcatcatcatc
ttcattttcgccgtgatgggtatgcagctcttcggcaagaattacaccgatcacgtcgac
tacttcccggacggtgatctacccagatggaacttcactgacttcatgcactcctttatg
atcgttttccgagtattgtgcggagagtggatcgagtctatgtgggactgcatgctggtc
ggcgacgtctcctgtataccattcttcttagctactgtcgtcatcggtaacttggtcgtc
ctgaatctcttcttagctctgttgctcagcaatttcggctcatcgaatctatcggccccg
actgcggacaacgacacgaacaagatcgcggaggcgatcgaccgaatagcgcgtttcatt
aagtggatcaagcgaaatatccttgcttttgctaagttgatgcgagccaaactcaccaat
cagatatccgatcaggcgccaggtgagggaccgtccaacagttggaaagaagatgggatt
gatcgcgatgaggacctagatcttgcagatggagaattggacgcatacagagacaagaag
agcgccaaagagcttaatcagcttgaagttgccattggcgatgggatggaatttaccatt
catggagatctgaagaacaaactgaagaggggcaagctgtgcatgaacaatacgaaggtt
atcgcgaattcaataaaccaccacgattatagattggacaatgattatattaatcagaac
gaagacgacactatcagtaacaaatcgtatggtagtcacaaaaatcgcgcatttaaggac
gagagtcataaaggcagcatggattcgttatcgaacggcgaagagaagaaagatgcgagc
aaagaagatttggaacaggaggaagaactagaagacgagtgtgaagagggggaagaaggg
gatataccagaggtcgacataataatcgcggatgaggatcctcttcaatcggattacccg
gccgattgctgtccagaaaattgctacaaaaagtttccatttctggccggcgacgacgac
gctccgttttggcaaggctgggcaaacctgagattcaagaccttccggctgatcgagaac
aaatatttcgagactgccgtcatcactatgatccttctaagtagcttggccttggctttg
gaggacgttcatcttcaatatcgacctgttctgcaggacgtattgtattacatggaccga
atatttactgtgatcttctttctcgagatgttgatcaagtggctggctctaggatttaag
aagtatttcacgaacgcctggtgctggctcgattttatcatcgtcatggtatcgctcatt
aacttcgtagcgtcgctctgtggcgctggcgggattcaagccttcaaaactatgcggacc
ctaagggccctaaggccgctcagggcgatgtctagaatgcaggggatgcgggtagtcgtc
aatgccttggtccaagccattccatccatcttcaacgtattgctggtatgccttattttc
tggcttatattcgctatcatgggggtgcagctgttcgctggcaaatattttaagtgtgtc
gacgcgaacaagacgacactcagctacgagataataccggatcgtaacgcttgcaatacc
gagaattacacgtgggaaaattcaccgatgaatttcgaccacgtcgggaaagcgtatctg
tgcctatttcaagtggcgactttcaaaggatggatccaaatcatgaacgacgcgatcgac
tctagagagctcaataaacaaccgattcgcgagacgaacatttacatgtatttctatttc
gtatttttcattatatttggatcgttttttactctcaacctgtttatcggagttatcatc
gacaactttaacgagcaaaagaagaaagccggcggatccctcgagatgttcatgacggaa
gatcagaagaaatattacaatgccatgaaaaaaatgggcaataagaagcctctaaaagcc
attcctcgtccgaggtggcggccacagggaatagtgtttgaaatagtgacggacaaaaag
ttcgatatgataatcatgctgttcatcgggctgaacatgctcacgatgacaatggaccat
tatcagcagagcgcaacgttcagcaacgttctggattatctcaacatgatattcattgtg
atattcaccagcgagtgtctcatgaagatcttcgctcttcgctaccactatttcaaggag
ccatggaacctctttgattttgttgttgttatattgtcaatattaggtctggtgctcagc
gacattatcgagaaatatttcgtgtcgccgactttgcttcgtgtagtgagagtggcaaaa
gtcggtcgtgtgcttcgactcgtgaaaggtgccaagggtatccgaacccttctcttcgcc
ctggcgatgtcgttgccagccctcttcaacatttgcctactgctgtttttggtgatgttt
atcttcgcgatattcggcatgtctttcttcatgcacgtcaaagacaagagcggactggac
gacgtgtacaatttcaagacattcgggcagtcaatgatactgctatttcagatgtcaacc
tcggccggttgggacggtgttctcgacggtataataaacgaggaggactgccaggagccg
aacaacgagatcggctatccgggcaactgcggatcctcgacgatcgggatcgcttacctg
ctctcgtatctcgtcatcagtttcctgatcgtcatcaacatgtacatcgccgtgatcctc
gagaattactcgcaagccaccgaggacgtgcaggagggtctgacggacgacgactacgat
atgtactacgagatttggcagcagttcgatccggacggcacgcaatacatcagatacgac
caattgtcggacttcttggacgtattggagcccccgttgcagatacataagcccaacaaa
tataagattgtgtcgatggatatccccatatgtaagggagaccttatgttttgcgtggat
atcctcgatgccctcaccaaggactttttcgcacggaaaggcaatccgatcgaagatccg
gtcgaaatcgaagaggtcaaggcccggcccgacgaggtcggctacgagccggtctcgtcc
accctgtggcggcaacgcgaggagtactgcgcccgtctaatacagcacgcctggcggaag
cacaagcagcagcgtcttggcgggccgagcgaggagagcgacgatccggacatcgacctc
tgtgtccggcagaccaaggtgctcgtcgagagcgacggctacgtcaccaagaacggtcac
cgcgtcgttatacatagccgatcgctgagcatcacttcgagaaccgcggacgtctga
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integrated database retrieval system
