Temnothorax longispinosus: 139819933
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Entry
139819933 CDS
T10889
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139819933 (Ddx1)
03016 Transfer RNA biogenesis [BR:
tln03016
]
139819933 (Ddx1)
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139819933 (Ddx1)
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139819933 (Ddx1)
Transfer RNA biogenesis [BR:
tln03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
139819933 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139819933
NCBI-ProteinID:
XP_071645830
LinkDB
All DBs
Position
10:7645467..7649494
Genome browser
AA seq
728 aa
AA seq
DB search
MTAFEEMGVLPEIAKAIDEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLESGKGAGTAVVQQPTHWGLSLFDRGHAMAVTLDGLRCQSREQKEWHGCR
ANKGVSGSGKYFFEATVTDEGLCRVGWSTSQAALDLGTDKFGYGFGGTGKKSNAKQFDNY
GEAFGMHDVIGCFLDLVKGEIKFTKNGVDLGVAFTLNAQQKSQTYYPAVVLKNAEMAFNF
GAHAFKHPPPNDYVAVSSAPKESVKYNPVNSTQSSNESDKPRNNAPQAIIIEPSRELAEQ
TYNQIQKFKTHLKDPMIRELLVIGGVNVKEQIATLNSGVDIVVATPGRLEDLIQGGYLLL
THCRFFVLDEADGLLNQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHSFDVKKMAER
LMHFPTWVDLKGEDAVPETVHHIVVMVDPQKDKSWRDLRHGIETDGVHERDEMNRTNDIA
CSLSEAVKILKGEYCIRAIKEHNMDRALIFCRTKLDCDNLERYLQKSDRQKFSCVCLHGD
RKPAERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVGR
AERMGLAISLVSSVPEKVWYHGSWCPSRGRNCNNTNLTDQGGCCVWYNEPRYLAEIEDHL
NVTIQQVSPDIKVPMNEFDGKVTYGEKRMAMGSNYENHVQQMAPVVAELAALESRAQITF
LKTHIAER
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagaaatgggtgttttgccagaaatagcaaaagctattgatgagatg
gattggacactaccgacagatgttcaagccgaagctatcccattgattctgggtggtggc
gatgtactcatggctgcagaaactggtagtggaaaaactggtgctttctgtttgcctatt
ttgcaaatagtttgggagactcttaaagatttggagtctggaaaaggagctggaactgct
gtagttcaacaaccgacacattggggactgagtctctttgatagaggacatgccatggca
gtaacgctggatggtttaagatgtcagagtagagaacaaaaagaatggcatggttgtcgt
gcaaataaaggggtatcgggaagcggcaagtattttttcgaagcaacggtcaccgacgag
ggtttatgccgagttggctggtctacgtctcaggctgctttagatttaggaacagataaa
ttcggttatggatttggtggtacgggaaagaaatcgaatgcgaagcaattcgataactat
ggagaggcttttgggatgcatgacgtgatcggatgtttcctcgatttggtgaagggcgaa
ataaaatttaccaagaacggcgtagatttgggtgtcgcatttacattaaatgcacagcaa
aaatcacagacttactatcccgctgtcgtgttgaaaaacgctgagatggccttcaatttt
ggagcgcacgcgtttaagcatccacccccaaatgactatgtagctgtatcgtcggctcca
aaagaatctgtcaagtacaatcctgttaacagcacgcagagctctaacgaaagcgataaa
ccgagaaataacgcacctcaggcgatcatcatagaaccttctcgcgaattagctgaacaa
acttacaatcaaattcagaagttcaagacacatttaaaggatccgatgatcagagaactg
cttgttattggtggagtaaacgtaaaagagcagattgctactttgaattctggcgtggac
atagtagtcgcgactcccggacgattggaggatctcatacaaggcggttatttgttgtta
acacattgcaggttttttgtgctggacgaagctgacggtctactaaaccaaggttacacc
gaacttatcgatcgtctgcacagacaaatcccgaaaattacatctgacggcaagagattg
caaatgatcgtgtgctcggcgacattacactcattcgacgttaaaaagatggccgaacgt
ttgatgcatttcccaacttgggtagatctaaagggcgaagatgcagtacccgagaccgta
catcatatcgtggtgatggtagacccgcagaaggacaaatcgtggcgtgacttgaggcac
ggcatagaaactgacggcgtgcacgagagagacgagatgaatagaacaaatgatattgcc
tgctcgttgtcagaggctgtgaagatactaaagggagagtactgcattcgcgctattaaa
gaacataacatggatcgggcattgatattctgcagaacaaaactcgattgcgataatctc
gagaggtatctgcagaaatccgatcgacagaagttctcgtgcgtatgtctgcacggagac
aggaagcccgcagagcgtaaggctaatttggaaaagtttaaacgtcaagaggtgaaattt
ttgatctgcactgatgtagctgctagaggattggatatcaccggtctgccttttatgata
aatgtgactttgcccgatgagaagtccaattatgtgcatcgcattggaagagttggtaga
gctgaaagaatgggtctggctatttctttagtcagtagtgtcccagaaaaggtctggtat
cacggctcctggtgcccttctcgcggaagaaattgcaacaacaccaacttgactgatcaa
ggtggctgttgcgtatggtacaatgaacctcggtacttggcagaaattgaagatcatttg
aatgtgacgattcaacaagtcagtccggacataaaagtgccaatgaacgagtttgatgga
aaagttacgtatggcgaaaaaagaatggcaatgggttctaattacgaaaatcatgtccaa
caaatggctcctgttgtggccgagttagccgcgctggaatctcgagcgcaaattacgttt
ttaaagacgcacatagcggagcgttaa
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