Temnothorax longispinosus: 139819938
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Entry
139819938 CDS
T10889
Symbol
Atms
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139819938 (Atms)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139819938 (Atms)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
139819938
NCBI-ProteinID:
XP_071645841
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Position
10:complement(7688504..7691253)
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AA seq
581 aa
AA seq
DB search
MAPTIQTNSNQADRDKRAARPAEKRSELICRVKYCNTLPDIPFDPKFITYPFEPTRFIQY
NPTSLERNYKYEVLTEHDLGVEIDLINKDTYAGDLNAQLDPADEKLLEEDVLTPQDSKRS
RHHARSVSWLRRTEYISTESTRFQPQTADKVEAKVGYSIKKNFKEETLYMDRDSQIKAIE
KTFEDNKKPIERHYSKPNVVPTEILPVYPDFKLWKYPCAQVIFDSDPAPTGRSVPAQIEE
MSQAMIRGVMDESGEQFVAYFLPLEETLEKRRRDLTAGIAYADEEEYEYKMAREYNWNVK
SKASKGYEENYFLVMRQDGVYYNELETRVRLSKRRQKVGQQPNNTRLIVRHRPLNANEFR
MQRYREKQLEPPGEEDEDEEEEEEEQEQEQEQETTQQEEKTDRKDTAVKGSEAENEGDSR
ASSRASSRASSRVSSRASSRKSRSRSRSRSNADSRSRSRSRSKSRSKSRSRSRSRSRSSA
RSRSRSRSPSKSKSPSRSRSRSPSNARSNARSRSGSPHARNTSRSRSNARSRSRSGTPAK
SPSRSRSNSRSKSRSRSRSRSGTGSGSGSASASGESGSESE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcacctaccatacaaaccaacagcaatcaagctgacagggacaaacgcgcggccaga
ccagcggagaaacggtccgagctcatatgcagagttaaatattgcaacactctgccagat
attccgtttgacccgaaatttataacgtatcccttcgaaccgaccaggtttattcagtat
aatccgacttcattagagcgcaactacaagtatgaagtactgacggaacacgatttaggt
gtagagatcgatttgataaataaagacacgtatgcgggtgatctgaatgctcaattagat
ccagcggatgaaaagttgctggaggaagacgttcttacgccacaggactctaaacggtcc
cgacatcatgccaggagtgtttcttggttacgacgtacagaatatatttccacagaaagt
accagattccagccgcaaacggcagacaaggttgaagctaaagttggttacagtatcaag
aagaacttcaaggaggaaacgttgtacatggatcgcgatagtcaaataaaagctatagaa
aagaccttcgaagacaataaaaagccaattgaaagacactacagcaaaccgaacgtagta
cctacagaaatattaccagtatatccagactttaagctgtggaaatatccatgtgcgcaa
gtcatatttgattctgatcctgcgccaactggtcgatctgtacccgcgcagatcgaagaa
atgtcgcaagctatgatacgaggtgtaatggacgagagcggtgagcaattcgtagcttac
tttttgccgttggaagaaacgttggagaagcgccgacgggacttgactgctggtatcgcg
tacgccgatgaggaagaatacgaatacaaaatggcgagagaatacaattggaacgtgaag
agcaaagcttccaagggatacgaggagaattatttccttgtgatgagacaagacggggtt
tactacaatgaactggagacgcgcgtgcgactgagcaaacggcgccagaaggtcggacag
cagccaaacaacacgcgcctgatagtgcgtcatagaccgctgaacgccaacgaattcaga
atgcagagatatcgagagaaacaattggagccgccaggagaggaagacgaggacgaagag
gaggaagaggaggagcaggagcaggagcaggagcaggagactactcaacaagaggaaaag
acagaccgaaaagatacggcggttaaaggttccgaagcagagaacgagggagactctcgt
gcctcgtcgagagcgtcctcgcgggcgtcctcgcgggtatcgtcgcgagcatccagcaga
aaatcacgatcccgctcgcggtctcgttccaacgccgactcgagatcaagatcgagatcg
agatcaaagtcaagatccaaatcgaggtcgaggtcgaggtcgaggtcgaggtcgagcgcg
cgttcgcggtcacgctcacgttcaccatccaaatctaaatcaccgtctcgatcacgctcg
cgttcgccgtctaacgcgcgcagtaacgcacgatctcggtccggcagtcctcacgcgagg
aacacatcgagatccagatcgaacgcgagatcgagatcgcgctcgggaacgcccgcgaag
tcaccgtcgagatctcggtcgaactcgcggtccaagtccaggtcacggtcaagatcgaga
tccggtactggtagcggtagcgggtccgctagcgcgagcggcgaaagcggctccgagagc
gagtga
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