Temnothorax longispinosus: 139820408
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Entry
139820408 CDS
T10889
Name
(RefSeq) nipped-B protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tln03036
]
139820408
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139820408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
139820408
NCBI-ProteinID:
XP_071646746
LinkDB
All DBs
Position
1:24826222..24841064
Genome browser
AA seq
2255 aa
AA seq
DB search
MPERIKLKMNGVVPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAEEAK
ILLSLRDENLVPQLIMSLSQTSSEHIELKDNYPNTEQSLDNEQNTPELLKAILQINPDVF
RGTQHNSPRNWPQGAPMLHANQSPASYGRFSPPYSSSSGSRQTPQGSPAQTAAARSVLPP
MVASGIAHTQHPRMPITPQNHADISQMSPFAVPSPSPRGNVMTEQTRTLTTPQHMQEDTN
CMNPLSNVALQSNMYSPAHMSSPNASLASLTNMTPQHNMAGMTPQQNMHMTSPIRNVPLQ
QHPAMGMQQNLYDSMMNQQVHHALGSGQSLDIDNAVQENQQFLLDPVAGLSDIDLPMENI
DTKQSVDHAIQQLLPTPQTTSYPNIHATDMVNVLDPAAASIAPNVQHQQNNNSEKSVKLA
GTEKMKEPIVMLNRLSLADQALMQKSLAAFAEKSPSRAAKMGISNRDDALKTDSESEEEI
GKNNKYFKARAKERQVQREKEKAERRKSEDKGRRRKRIMTEDDEEDDDKRDASYSPTKPK
IRKIEKKLVPVLAKLSVEELMETNTYQRFNSTIETIFENTEDALASADLEDDGEVLAEVL
IPKYQLHDLCTEAAKLKTLGAMESIPTDKLVRLLNILEKNIRDGARVSPLVDPNDDVEEG
RLWMHLAMERVQRAVDSSLVALHIMTSSNMPKTVYLEDVIDRIVLFMKFQLQNTIYPSFD
PVYKIDTKNKTDNFNSSGRKKRGHMKEVREKSILQVYNKMHELVGLLAELLNIQVLTDTS
VLHASSLGVAPFFVESVSDLQLSALKLVTVIFTKYEKHRRLLLDDILASIARLPSSKRSL
RTYRLNSEDYIQMLTALVLQLIQCVVVLSDSKKEDDEKKSSHVDADVFIINRYETATRIA
GNFLTVFLNKCGNKGEEIDFRPLFENFVQDLLATVNKPEWPAAELLLSVLGNLLVGHFSN
KSSDMSLRVASIDYLGVVAARLRKDAVNSQCKLSTIDQIIRDIKLEQQKDSDYDQIKDKE
IAGLNEDEERTVFLQKVLLDYLAVNGTKDPALGYARHFYLAQWYRDCAMEKSRVGQSKNS
PSKKMHKKRSKKKNRHHSSDQDTESELDEQDPDENDNNEQKNSEAYRIIEEKKKYIVSRI
RPCSTGTKPDILQTYIDYNSAELISQYLASKRPFSQSFDKYLKQILHVLTESSIAIRTKA
MKCLTMIVEADPSVLARVDMQLGVKHSFLDHSTSVREAAVDLVGKFVLSRPELIDKYYDM
LSARILDTGVSVRKRVIKILKDICMECPDFPKIPEICVKMIRRVNDEEGIRKLVMEVFQN
MWFTPVRERPTLDSESLLRKVMNITDVVAASKDMGFEWFEQLLVSLFKPKEDKDDSTKMQ
TEPPRALLTACKQIVDCLIENVLRLEETNLDSEKSEKKGSSQRLVACLTTLYLFAKIRPR
LLVNHAITLQPYLSLKCQTQGDYQIISSVAHTLELVVPLMEHPSETFLAQLEEDSVKLIL
QHDRSVVASCLSCLGSVVNNVTRNYKLIRDCFKKYYGHLTEYKSFYEKDPTNPMLIRCRP
FFRRALFTVGLLLRHFNFMDPEVIEGLADNIKDQVFETLSYFVHLNNDDIRHFTLSAIGS
LCIRHYEFMMLPELKELYHHLLTSEYALVHMRNQVLNNIEVYLQEEEKRMIKQDLEWAKL
SKQENLKEMGDVSSGMASTVIQLYIKEILESFLHVNVSVRHAALKVIQLILAQGLVHPVQ
IVPYLICMSTDCEKAVSHSADKQLQDIEKKYPGFIHMKSQFGIKLSYRLQKILQNDITVR
GMRTKEGEFPSALNGFLYTILRNTKQQRRAIVLSFLKHFDEAAKTSLSQMLYLADNLAYF
TYQVQDEPLFIIHHIDIIISMSGTNLLQSFKEALLPKESSAGQSGHSRHMMGQPTAQQIG
QLMGQPMEQPMGQPMGQPMGQPMSQPMGQPAGQTTMIGPDGQPKSDQLLSALEDEEDDEE
DEEVLLARLPGDTTLLREYITASQGFLLLLTLRQHLKNLYGFSDAKIGQYSPSEAAKVYE
KAVNRKNNLLFEPKATLQRLRDGVTINEELDENGRKKLVKEYLDFKQLMLKFDPEEPDDD
GGNDAADTSGGGKHSAENPQAARISPRSEADGRTIADGAVAGDAAALIITAGQQQFQLPP
QSNLTAPMEHPNNSVNSLPIMAAATATTTVAGTPTTTPRVPKLTIHTHPDSRESHRKHRT
HKTDKSVRKHKKKKRRRISDSSESGEDYSDPDFLV
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgaatcaaactcaaaatgaatggggttgtaccgagtgtgccaataactacc
ctcgctggtatcgcgagtctcacagacttgttacctgaaatgcccctaccaactccgctg
ccgcagactctgactaataaatcgctgctgtttcatccacgagtagcggaagaagccaag
atattgctgagccttcgcgatgagaatctcgtaccgcagttgataatgtcactgtcgcag
acatcgtcggaacacattgaactcaaggataattacccgaacaccgagcaatcgttggat
aacgagcaaaacacgcccgaattgctcaaggcgatcttgcagataaaccctgacgtattc
agaggaacccagcacaattctccgaggaactggccgcaaggtgcgcctatgctgcacgcg
aatcaatcgccggcgagctatggtcgtttctcgccgccctattcgagctcctcgggctcc
aggcaaacgccccaaggtagtccggctcaaaccgctgcagccaggtccgtacttccgccg
atggtggccagtggtattgctcatacgcaacatccgcggatgccaattactccgcagaat
cacgcagacatctcgcagatgtcccctttcgccgtgccttctccgtcgcccagaggtaac
gttatgaccgaacaaacgagaacgttgacgacaccccagcatatgcaggaggacacgaac
tgtatgaatcccctatcgaacgtagcccttcaatcaaacatgtactcgccggctcatatg
agctcgccaaatgcatcgctggcatctctcaccaatatgacacctcagcacaacatggct
ggtatgacgccacaacagaatatgcacatgacatccccgatacgtaatgtgcctctgcaa
caacatccggccatgggtatgcagcagaacctttatgattccatgatgaatcagcaagtt
catcacgcgttaggcagcggtcaatcgttagatatcgataatgcggtacaggagaatcag
caattccttctcgatccggtagctggtctctccgatatcgatctgccgatggagaacatt
gacacgaagcaaagcgtcgatcatgcgatacaacagttattaccgactcctcagaccaca
tcctatccgaatatacatgccaccgacatggttaatgttttagatccggctgcggctagc
atagcgcccaatgtgcaacatcaacagaacaataattcggagaagagtgtgaaattggct
ggaacagaaaagatgaaagagcccattgttatgttgaacagattatcgttggctgaccag
gcacttatgcagaagagtttggcggcgtttgcagagaaatcgccgagtcgcgcggcgaaa
atgggcatttccaatcgtgacgacgcgttgaaaaccgattccgagagcgaggaggagatc
ggcaagaataacaagtattttaaagctcgcgcgaaagagcggcaagtgcaacgagagaaa
gagaaagcggagcggcggaaaagcgaggacaaaggtcgcagacgaaaaaggataatgacg
gaggacgacgaagaggatgatgataaacgagatgcatcgtactcgcctacgaaaccgaaa
atacgcaagattgagaagaaattagtgcctgtattagccaaactgagcgtggaggaatta
atggagaccaatacgtatcaacgatttaattctaccatagagacgattttcgagaatact
gaggatgctttggcgagtgccgatctggaggacgacggtgaagtgcttgcggaggtgctt
attcccaagtatcagttacatgatctttgtacggaagcagccaaactcaaaacgttgggc
gccatggaatcgatacctacggataaattggtgaggctgttgaacatcttggaaaagaac
atacgagacggcgcgagggtgtcgccgctcgtggatccgaatgatgacgtggaggaaggg
cgtttatggatgcacttggcgatggaacgggtacagcgcgccgtggattcgtcgttggtc
gcgctgcacattatgacctctagcaatatgccgaagacggtttatctggaggatgtgatt
gatcgaatagtccttttcatgaagtttcagctgcagaacacgatctatccttctttcgac
cccgtatataagatagatacaaagaataagactgacaattttaattctagcggacgcaaa
aagcgaggacatatgaaggaggtgcgcgagaagagtattctgcaggtttacaataagatg
cacgagctggtaggtctgttggctgagctattgaacatacaggttctgacagacacaagt
gttctgcatgcatcgtcattgggtgttgcaccgtttttcgtcgaatcggtgagtgatctt
caattgagtgcattgaagctcgtcactgtaatatttacaaagtacgagaagcatagaaga
ctactactggacgacatcttggcgtcaattgcgagactacccagcagcaaaaggagttta
cgcacgtacaggctcaattctgaagattatatacagatgttaaccgcattggtcctacaa
cttattcagtgcgtagtcgttctgtcggactcgaagaaggaagacgacgagaagaagtcg
agtcacgtagatgctgacgtcttcattatcaatagatacgagaccgccaccagaattgcc
gggaattttttaacggtatttctcaacaaatgcggtaacaagggcgaagagattgatttc
agaccattgtttgagaatttcgtacaggacttattggcgacggtgaataaacccgagtgg
cccgctgctgaattgttattaagtgttctcggtaatctgttggtaggacatttttctaat
aagagctctgatatgtcgcttcgagtagcttctatcgattatctcggcgtggtagcggcc
agattgcgcaaagatgcagtcaattcgcagtgcaaattgtcgaccattgaccaaattata
cgagacatcaagctcgagcagcaaaaggactcggactacgatcagataaaagataaggag
attgcaggactaaacgaggatgaagaaaggactgtgtttctgcagaaggtacttctggat
tatctagccgtcaacgggacgaaggatccggctctcggatatgcgcgtcacttttatctg
gcccaatggtatcgagattgcgcgatggagaagtcccgggtgggccagtcgaaaaacagt
ccgagcaagaagatgcacaagaaacggtcgaagaagaaaaatcggcaccacagcagcgat
caagataccgaatccgaattggacgagcaagacccagacgaaaacgataataacgagcag
aagaattcggaagcttaccgaattatagaggagaagaagaagtatattgtcagtagaata
aggccttgcagcacaggaacgaaaccggacatccttcagacatatattgattacaactcc
gcggaactgatctcgcagtatctcgcgtccaagagaccgttctcacagagttttgataaa
tatttgaagcagattctccatgttttaacagaatcgtcaattgccattagaaccaaggca
atgaagtgtttaacgatgatcgtcgaggccgatccgagcgtgctggcgagggtggacatg
cagctgggtgtgaagcattcgtttctcgatcactcaacgtcagtacgggaggcagcggtt
gacttggtaggaaaatttgttttaagtagacccgaactgatagacaaatattatgacatg
ttgtctgcgagaattctagataccggtgtgagtgtccgaaaacgcgtaatcaaaattctc
aaggatatctgcatggagtgtccagactttcccaaaatcccggaaatatgcgtgaaaatg
ataaggagggtgaatgacgaagaaggtattcggaagctcgtcatggaggttttccaaaac
atgtggtttaccccagtaagggagcgtcccactcttgactcagaatctctgttgagaaaa
gtgatgaacatcacggacgttgtagcggccagcaaggatatgggattcgagtggtttgag
caactcttggtaagtttgttcaagccgaaggaggacaaggatgacagcacaaaaatgcag
acggagccgccgcgggctttgctgacagcgtgcaagcaaatcgtggactgcttgattgag
aacgtattacggcttgaggaaacaaatctagactcggagaaatcagaaaagaaaggctcg
tcgcagagattggtcgcgtgcctgacaacgctctatctattcgcgaagatacgaccacga
ctgttggtcaatcacgcgatcactctacagccttatctgagtttgaaatgtcagacacag
ggcgattatcagatcatcagtagcgtcgcgcacacactcgaattagtggtgcctctaatg
gaacatcccagcgagacttttttagcacagttggaagaagactcggtgaagctgatcttg
cagcatgacagatcggtggttgcaagctgtctatcgtgtctgggctctgtagtcaataac
gtcacacgaaactacaaactgatacgagactgcttcaagaaatactacggacatttgacg
gagtacaaatcattttacgagaaggatccgacgaatcctatgttaataaggtgcagaccg
tttttccgacgagcgctcttcacggtcggcttattgcttcgtcattttaacttcatggat
ccagaggtgatagagggcctagcggataacatcaaggatcaggtcttcgagacactcagc
tatttcgttcatttaaataacgacgatatccgacacttcacactatcggccataggttct
ctttgcatacgacattatgagtttatgatgttaccggagctgaaagaactctaccatcat
ttgctcacatcggagtacgcattggtccatatgagaaatcaagtgcttaacaacatcgag
gtatatctgcaagaagaggagaagaggatgattaagcaggatttggaatgggccaagctg
tcaaagcaggagaacttgaaggagatgggtgacgtgtcgtcagggatggcgagcactgtt
attcagctgtatatcaaagagatccttgagtccttcttacacgtcaacgtaagcgtccgg
catgcggctctcaaagttattcagttgatcctggcgcagggtctggtacatcccgtccag
atagtgccctatctgatctgtatgagcaccgactgcgagaaagccgtgagccacagcgcg
gataagcagttacaggatatcgagaagaaatatccgggcttcattcacatgaagtcgcaa
tttggcatcaagttgagctaccggttgcagaaaatcctgcagaacgatatcacggtgaga
ggtatgcgaacgaaggagggtgagtttccgagcgcgctcaacggtttcctctatacgatc
ctgcgcaatacgaaacagcagaggcgggcgatcgtattgtcttttctcaagcacttcgac
gaggctgccaaaaccagtctgtcgcagatgctatacctggcggacaatctcgcctacttt
acatatcaagtacaggatgaaccgctcttcatcatccatcacattgacattatcatttct
atgtccgggacgaatctactacagtcttttaaagaggctttgctgcctaaagagagcagc
gcggggcaatctgggcattccaggcatatgatgggacagccgacagcacagcagatagga
cagctgatgggacagccaatggaacagccgatgggtcagccaatgggtcaacccatgggg
cagccgatgagtcaaccaatggggcagccagcgggacaaacgacgatgataggaccggat
ggtcaaccaaaatctgatcaattgttgtcagcactggaggatgaagaagatgatgaggag
gacgaagaagttcttctagccaggttgccaggcgataccaccttgctcagggagtatatt
accgccagtcaaggctttttgcttctattaacacttcggcagcatctcaaaaacctttat
ggtttttctgacgcaaagatcggtcaatattcgccgtcggaagcagccaaggtctacgag
aaggcggtaaatcgtaagaataatttgcttttcgagcccaaggctacgttgcagaggctg
cgggatggcgtgaccatcaacgaggagctggacgaaaacggcagaaagaagcttgtgaaa
gagtatctggacttcaagcagctgatgctgaaatttgatcctgaggaaccagacgacgat
ggtggcaacgatgctgccgacaccagcggtggtggcaagcacagtgcggagaatccgcaa
gcggcaaggatatcgccgcgttccgaggctgacggtaggacgatagccgacggtgcggtc
gcgggagatgctgccgctcttatcatcacggctggccagcagcagttccagttaccgcca
caatcgaatctgaccgctccgatggagcatccgaacaattcagtaaactcgctgccgatt
atggcggcagcaacggcgacaacgacggtcgctgggacgccgacgacgacgccgcgggtg
ccgaagctgacgatacacacccatccggactcgagggagtcgcaccggaagcaccgcacg
cacaagacggacaagtcagtgaggaagcacaagaagaagaagaggagaagaatctccgac
agcagcgaaagcggcgaggactacagtgaccctgacttcctagtgtga
DBGET
integrated database retrieval system