Temnothorax longispinosus: 139820733
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Entry
139820733 CDS
T10889
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
tln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139820733
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139820733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139820733
03110 Chaperones and folding catalysts [BR:
tln03110
]
139820733
04121 Ubiquitin system [BR:
tln04121
]
139820733
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139820733
Chaperones and folding catalysts [BR:
tln03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
139820733
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
139820733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
WH1
IR1-M
ANAPC3
TPR_2
DUF4910
Motif
Other DBs
NCBI-GeneID:
139820733
NCBI-ProteinID:
XP_071647305
LinkDB
All DBs
Position
10:19511116..19523837
Genome browser
AA seq
2879 aa
AA seq
DB search
MFRSKKDVDRHVQHVFCKLRNENEKNLRCYNIAKLYYQVGDYESTKRYVFNYLEIRDNSP
GAHKLLGQAYEALGQKEAAFNEYKVSLELEGRQDDLVLKVCELLVDMDIGMDVNKLKYWV
ERADKLFPHHPVVFQLKEKLLTTEKPNNSSEDLEALIASELAARPTDVQLRIKLLNYYMS
ERKLDKAYEHAISVEATVSHRDSIAWYQLLYELLTKCKETKSLDWSFWFFYISVSDKYAG
LCLKEQGGEMKKSIPEATQAVFNFDQNLNEMKSKNFSKQHTFTEHLFTHMWGQLHFHLAC
LLLRKTKREQGSWNETGRLCSPLLLTALHVAPLENRIRIQLEDDGFKNQFNIWIMEAAYR
CCQAGYILQNYARDDIKKLMDRIDKFCTGHWRERIYQRIFVIRVHIDYMRNSFFCYHSAP
DPPLRICTANQLRTYSQIAQELWPASLHHQIWLGMENRPQHKDAPYPDQTSRVFPALQFS
VFNSNQAAPDSLCLIDIDAFLNAAILCSSAVLEEQQLGSFINPEKLPTLPIDLTTTLSTS
NQEKWWSAAYKMYSKRDVDGDIGELRQELQQGLEIIRCIGNHGMHPVLLVHLARMFHYRA
KMMKEKDEANGYISRWEARSELYWTAALPLLERLQNNQTLRMSPSKLFNYQGKEMNNFEL
TNALEEGKLLLAQRLVRDKQYEQAIDALQALKCPEASFQLAQIYKIFADEIVNSTPRESL
TSEMRSQHIIMLSKAKNSYYLTLDRLRSPGTNPKHPLNSELGTHITDIENELKRIDPDLG
RGELSRNDDGISDESYSPPPSAMDHVTNPALPMLTTLTGGSNMLSTPQRNTHRTPKHAST
PCKLQDHLNLSKNRAEARPSPERLDAQIRQIMQSRDNEIQDLMEQMKNMMTHMKTLNDKV
DNLTKEVVESRKENQKHQQQQQQRVQQQQNVNPVIDSEDFLDDEYVDLSYSNQPTVPVSS
ISGNIFPPQHARHPYSSLMYPSAFQYYQGGLPFTDPNAQATISSLYPHTVYPMPMLYPNQ
TKVPDNPLQQGLFAPTLSSQLPDLMPTGVTNPSLQISLMQKIETPSRTKPEATATTATTT
TTIIKDAPVNKAPPVNVVITTSDTLPTTVPSTQPTLSVTIPPQYRLEGGAAITFPTTPIT
TTMMTVASTTMTTTKSSSSNVPHCYQIPMPLQATIPTTVNLPPTSTYVTPASINVPPMYA
NLTTSPSIVTMTHTTSSGPLLGGQDNATSSKIYDKTDITKPIYEPVESPNTSTEICEEHD
PIPNFVPVIPLPAKVKVTTGEEDEDTLYCGRAKLFRFVDKEWKERGVGDVKLLRNTEGKV
RLLMRRDQILKICANHMLRPDMDLSPMTNNNKAWFWVANDFADEEVKLEKLCIRFKTVEE
AMMFKEAFDQARFSLLASPEKVSKISEKAFSSDKDASKKSQSTQQAKISSTTEVDKSKSS
TTLGGFSFSSKPIIQEVSDTETSDFKKIEEPPKVSPFSGFSFTKSTGKAETKITTTAATS
VASTPSASFIFASTPTTNSQSSVLTSLASNASPMFATPTTTGQNSTTLRRPRLPPPGATK
QGSTDETRPQTENEQRLFVGTASLQCQCVNTMQWKNKGTGPLMLLLNVKSGRLRVLLTDD
ASSKIYSHGVPLDMAFTYKSGTTVVNWTVPGDAKEPGKTWSLHAATFSTPELATQFYNIV
SSCQQKLAKGSSPSEVAKELEKKTQTSSSKNKGQNATETKPPPLSELFKPPTGSWECGSC
YTRNKATDMKCVACEAPSPSAANKSGSAVVSKPVDSGKPPLSELFKSPAGSWTCTGCYIV
NSGTNAYCVACDSPKDPSQPPKPQQANIFQLNASPGATSMTTFSFGIPQVMHTTKETTKE
TTGTGFSFRMPKAEDKSVNDSATVTSSKPEETTDTNFVFGIPIKSYALNTSDSPFTFQLS
SPTKSFGFNFMAKSPAKSPGGGGETSEDEVVESEDVHFSPIVPLPDKIEVKTGEEDEEVL
YSHRAKLFRFDTALKEWKERGLGDIKLLCHKETGKLRLIMRRDHVLKLCLNHMLTIDIEF
TPKDEKTWLWTTADYSEGEIEYMQFACRFKTAEIAADFKRVVDDARISAVTISSDKMDKP
TTKTSTKMTSSPVKEIEIIYEAKVTPEEKAAALKLQLPENFYAYKQKEDCPGCRGCRKPS
IALYPDNAGQDSTKWKSVPEEQKVITQSQIVSRSSSDPESTGETTQSVTQSASVKNGFSF
ATSPATFKSPAASTNFDSSTMSFGTGDLKLFNDKKTTTFSFGMNPQFGTNETAETDTSLE
NFKICSPSNAQTTASVFKTPSFEYTPTFDSEKSLFGVASKMSIFGESSSDGSVSSSTATK
TTTATVTTANSILKTSTVVTTSITSNQSSNSVFGANATPFSKMTFGSNNTLPFGSSTTTT
TNIFGSSTTTTNIFGGTIAPTTTNFFGGITAATTTNIFGKTTGPTTTNMFGGTTAATAAN
VFGTTTITNVFGATPTSTVFDTKPSDDIQKNEDNSIFSVNDVSFSVLAAAAAQPEAFKVD
PNFSFAGAGSSVFGSKSASSLNSSTNVNKSYEDSVQKENNEEDDGEDNEQEHDPHFEPII
PLPDAIEVRTGEEDEEKVFCHRAKLYRYDNATKEWKERGVGEMKILHHADHGSYRLLLRR
EQVHKVVCNFLITSDVEFHPLSTSDQAWMWAGMNYAEQEPCVEQLAVKFKSPDLARQFKA
HIDNVQQELRDKRTTEGERCIGETEDSEEHDRGNDVEEEQEEEEEDEEEDEEDDHEIPII
EKRATVFARWPNDTKWESVGLGNLAIYYDSEIYAERIVLKLDDSEEYASNTIISMDTVMR
VEGKECIWSGIDYALDPPGRRVLRAVFSSVQAAQQMHTFFEDGVDCAKQAGVVEYQEAE
NT seq
8640 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctcgaagaaggacgtagaccgccacgtgcagcacgttttctgcaaactgcgg
aatgagaacgagaaaaatcttcgttgttacaatattgccaaactgtattatcaagtaggt
gattatgaatccacgaagagatatgtatttaattacttagaaatacgagacaattctcct
ggtgcgcataagttgttgggtcaagcgtacgaggctcttggtcaaaaggaagcagctttt
aacgagtacaaagtttcccttgaactcgaggggaggcaggacgatctggtcttgaaagta
tgcgaactactggttgacatggacataggaatggacgttaataaacttaagtattgggta
gaaagagctgacaaactatttccacatcacccggtggtttttcaattaaaagagaagctt
ttgactacagagaaaccgaacaacagcagcgaggatcttgaagcacttatcgcatctgaa
ttggctgcgagaccgactgacgtgcaacttcgtatcaaattgttaaattattacatgtcg
gaacgcaaattggataaagcttatgaacatgccatcagtgtagaggccactgtttctcac
agagacagcattgcatggtatcagctgctgtacgaattattaacaaagtgcaaagagact
aaatcccttgattggtccttctggtttttctatatatccgtatctgataaatatgcggga
ttatgtctcaaggagcaaggtggcgaaatgaagaaaagcattccagaggcaactcaggca
gtatttaattttgatcaaaatctaaatgagatgaagtcgaaaaacttttctaagcaacac
accttcacggagcacttgtttacgcacatgtggggtcaattgcacttccatttggcatgt
ttgctattgcgtaaaacgaaacgcgagcaaggcagttggaacgaaacgggaagactgtgc
tcgcccctgttgttgactgcgttacatgtagctccgttagaaaatcgtatacgcatacaa
ctagaagatgatggatttaagaatcaattcaatatatggattatggaggcagcatatcga
tgttgccaagctggttacattcttcaaaattatgccagggatgacataaaaaagctgatg
gatagaattgataaattttgcacgggacactggagagagcgtatttatcagagaattttt
gtgatcagggtacatatcgattatatgaggaattcatttttttgctatcattcagctcct
gatccacctttacgtatatgcactgcaaatcaactaaggacttacagccaaatcgcacaa
gagttgtggcctgcttcattgcaccatcaaatttggcttgggatggaaaatcggcctcaa
cacaaagacgctccatacccggatcagacctcgcgtgtgttcccagcgttacaattttcg
gtattcaattcgaatcaagcggcacccgacagcctatgtcttatcgatatcgatgcgttc
ctcaacgcggcaatactctgctcatccgccgttttggaagaacagcaacttggtagcttc
ataaatccagagaaactgccgacactgcctatcgatcttaccacgacactgtccactagt
aatcaggagaaatggtggtcagcggcatataagatgtactccaaacgagatgtagacggt
gacatcggcgagttacgacaggaattgcaacaaggtttggaaattattcgctgcatcggt
aatcatggcatgcatccagtgttattggtgcatctagcgcgcatgttccattatcgtgcg
aagatgatgaaggagaaagatgaggcgaatggctacatctccagatgggaggcacgttcc
gagctgtactggaccgccgctctaccgctgttggagagactgcagaacaatcaaacgtta
cgtatgtctccatcgaaattattcaattatcagggcaaagaaatgaacaatttcgagctg
acgaacgctcttgaggagggcaagttgctgttggcccaacgactcgtacgcgacaaacag
tatgagcaggcaatcgacgcgctgcaggcgcttaagtgcccggaagcatcgtttcagctg
gcacagatttacaaaatcttcgcagacgaaatagtgaattccacgcctcgggagagttta
acgtcggagatgcgatcgcagcacatcataatgttgtcaaaagcgaagaactcttactac
ctcacgctcgaccgacttcgtagtccgggcacgaatcccaaacatccgctgaactctgag
ctcggcactcacatcactgatatcgaaaatgagttgaagaggatagatccagatttaggc
aggggtgaactaagtaggaatgacgacggtatatccgacgagagttattcaccccctccc
agtgccatggatcatgtcacaaatccggcattgccgatgctgacgacgctgaccggcggt
tcgaatatgttgagcacccctcagaggaacactcatcgtacgccgaaacatgccagtaca
ccgtgcaagttgcaggatcatctgaatctgtcgaagaaccgcgcggaggcacgtccgagc
ccggagcgtctcgatgctcagatacgtcagattatgcaatcccgggacaacgagatacag
gacctgatggaacagatgaagaacatgatgacgcatatgaagacgttgaatgacaaagtg
gacaatctaacaaaggaagtggttgagtcgcgcaaagagaatcaaaagcaccaacagcag
cagcagcagcgtgtacagcagcaacagaatgtgaaccctgttattgattccgaagacttc
ctcgacgatgaatacgtcgatttatcctattcgaatcaaccgaccgtgccagtgtcctcg
atttccggtaacatatttcccccgcaacatgctcggcacccttactcgtcattaatgtat
ccttccgcgttccagtattatcagggaggattaccatttactgacccaaacgctcaggcg
accatatcgtccctgtatccgcacaccgtctatccgatgccaatgctatatcctaatcag
acaaaagtgccggacaatccgctacaacaaggtctctttgcaccgacgctttcctcgcag
ctgcccgatcttatgccgacaggcgtgacgaatccgtcgttgcagatatcgctgatgcag
aaaatcgaaacaccatcacggaccaagcccgaagcgacagcaacgacggctacgaccacc
acgacgattattaaagatgcacctgtgaacaaagcacctcctgtaaacgtggtcatcacg
acatctgacacgctaccgaccacggtgccgtctactcaaccgactctaagtgtcaccata
ccaccgcagtaccgactagaaggtggagcagccatcactttccccactacgcccataacg
acgacgatgatgacagtagcgtcaacgacaatgacgacaacaaaatcgtcatcttccaat
gtgccgcattgctatcagattcccatgcccttgcaagcaaccataccaacaactgtcaac
ttgccaccaacctctacctatgtaaccccggccagcatcaatgtgccgccgatgtacgcc
aatctaacaacgtcaccgtctattgtcacaatgacgcatacgacaagcagtggtcctttg
ttaggcggtcaagataatgctactagtagtaagatatacgacaagactgatatcaccaaa
cctatctacgagccggttgaatcaccgaatacatccacggaaatatgcgaggagcacgat
ccgataccgaacttcgtgcctgtcataccattacccgcgaaggtgaaagtcaccaccggt
gaagaggatgaagacactctgtattgcggccgggcaaagctgttccgctttgtcgataag
gagtggaaggagcgcggcgtcggcgacgtaaaactgttgcgcaacacagaaggcaaggtg
cgcttgctgatgcgtcgcgatcagatcctgaagatctgcgcgaatcacatgctgagaccc
gatatggatttgagtcccatgacgaataacaacaaggcctggttctgggtcgctaatgac
ttcgccgatgaggaagtgaagctggagaaactttgtatcagattcaaaaccgtggaagaa
gcgatgatgtttaaagaggcctttgatcaggccagatttagcctactcgcatctccggaa
aaggtgtccaaaattagcgaaaaagctttctctagtgacaaagacgcgtccaagaaatca
caatcgacacaacaagctaaaataagttcaacgacggaagtggacaaatcaaaatctagc
acgacactaggaggattttctttcagttctaaacctattattcaggaagttagcgacaca
gaaacaagtgattttaagaagatcgaagaaccgccgaaagttagtccgttcagcggattt
tcattcaccaagtcaaccggtaaagccgagacgaaaattacgaccactgctgcaacaagc
gtcgcttcaacaccatctgcaagcttcattttcgcctcaactccgacgacgaactcgcag
tcgtctgttctaacgagcctggcctccaatgcatcaccgatgtttgccactcccacaaca
accggtcagaattctacgacattgaggagacctcgtttgccgccacccggcgccactaag
cagggatccaccgacgaaacgcgaccgcaaacagaaaatgagcagagattatttgtcgga
acagcgagtcttcaatgtcaatgcgtcaatactatgcagtggaagaacaagggtacagga
ccattgatgctattgttaaacgtgaaatctggcaggcttcgtgtattactgacggatgac
gcaagttccaagatctatagtcatggagttccgctggatatggcgtttacatacaagagt
ggcactacagttgtcaattggaccgttccgggagatgctaaagaacccggtaagacctgg
tcgttacacgccgcgactttcagcacgccggaactagcaacccagttctacaacatcgtg
tcgagctgccagcagaagctagctaaaggcagtagtccgagcgaagtcgcgaaggagctc
gagaaaaagactcaaacgtcatcgagcaagaacaaaggtcaaaatgccaccgaaacgaaa
ccaccgccgttgtcggaattgtttaaaccaccgaccggttcctgggagtgtggcagttgt
tacactagaaacaaggccacggacatgaaatgcgtagcctgtgaagctccgtcgccttcg
gcggcgaacaagagcggttctgcggtcgttagcaaacccgtcgattccggcaaaccaccg
ttgtcggagctgttcaagtcgcccgccggctcttggacctgcacgggatgttacatcgtc
aattccgggacaaacgcctactgcgtcgcctgcgacagtcccaaggatccgtcacagccg
cctaagccgcagcaggccaacatcttccagctgaacgcatcccctggcgcaacgtccatg
accacgttttccttcggcattccccaagtaatgcacaccaccaaggaaactaccaaggaa
acgactggcactggttttagttttcgcatgccgaaggcggaggataagagtgtgaatgat
agcgcgacggtgacttcatccaagcctgaggagaccacagacaccaacttcgtattcggt
ataccgataaaaagctacgcgttaaacacgagtgactcgccgtttaccttccagctgagc
tcgcccaccaaatccttcggctttaactttatggccaagtcaccggctaaatcgcccggc
ggtggcggtgagaccagcgaggacgaggtggtggagagtgaagatgtccacttctcgccg
atcgtgccattgccggacaagatcgaggtgaaaaccggcgaggaggacgaggaggtgctc
tacagtcatcgagcgaagctcttcaggttcgataccgcgctgaaggaatggaaggaacgt
ggattaggcgacatcaaactgctatgtcacaaagaaaccggcaaattgcggctgatcatg
cgtcgggaccatgtactaaagctatgcctgaatcatatgttgaccattgacatagagttc
acaccgaaagacgagaaaacatggctgtggactactgcggattacagcgagggtgagatt
gaatacatgcagtttgcttgccgctttaagacggctgaaatcgcagcggatttcaaaaga
gtggtcgacgacgcaaggatatcggctgtcactattagcagcgataagatggataaaccc
acgacgaaaacgtcgacgaagatgactagctcaccagtcaaggagatcgagattatctac
gaggcgaaggtcactccggaagagaaagcggccgccttaaagttgcagctaccagagaac
ttctacgcttacaagcaaaaggaagattgtccgggttgtagaggctgtaggaaaccgagc
atagcgttatatccagacaacgctgggcaagactcgacgaaatggaagtccgtgcctgag
gaacagaaagtgataacgcaatcgcaaatcgtctcgagatcgtcgagcgatccggagagt
accggcgagactacccagagcgtaacacaatctgcgtctgtgaagaatggattctctttc
gcgacatcccccgcgacgttcaagtctccggctgcttccaccaacttcgacagctccacg
atgagctttggtaccggcgatttgaaactgttcaacgataagaaaaccacgactttttcg
ttcggcatgaatcctcagttcggtaccaacgaaactgcggagacggatacctcgcttgag
aatttcaagatctgtagtccctctaatgctcaaacgacggcatctgtattcaaaacgcct
agtttcgaatatacgcctactttcgattctgagaagagtctctttggcgttgcctcgaaa
atgtcgatcttcggtgagagcagcagtgacggttccgtttcttcttccaccgctacaaaa
acgaccaccgctactgtcactacagcgaattccattttgaagacgtcaaccgtagtcacc
acgtcgatcacatccaatcagtcctctaactcggtgttcggcgctaacgccacgcctttc
tcgaagatgacgttcggtagcaacaatactttgccattcggtagctctactacaacaacg
acaaacatctttggtagctctacaacgacgacaaacatcttcggcggaacaatcgcaccg
acgacgacgaacttcttcggtgggataacggcagcgacgacgaccaacatcttcggcaag
acaacgggaccgacgacgacgaacatgttcggcgggacgacggcagcgaccgcggcgaac
gtcttcggtacgacgacaataacgaatgttttcggtgcaacaccaacgtcgactgtcttc
gacactaaaccgtcagatgacatccagaaaaacgaggataattccatcttctcagtgaat
gacgtgtccttctcggtacttgctgcggcggcggcgcaaccggaggccttcaaagtcgat
cctaacttttcattcgctggtgcgggatcatcggtgttcggctcgaaatccgcttcatca
ctcaatagctcgacaaatgtaaacaaatcatatgaagattccgtgcaaaaggagaataat
gaagaggacgatggcgaagataatgagcaggaacacgatcctcactttgaacctattata
cctttaccagatgccatcgaagtccgaactggcgaagaagatgaggagaaagtattctgc
cacagagccaagttgtacagatatgacaatgctactaaggaatggaaggagcgcggcgtc
ggcgagatgaagattctgcatcacgcggaccacggcagttaccggttgctgctgcgccgg
gaacaagtacacaaggtcgtttgcaacttcctaatcacttccgacgtagagttccatccg
ctctccacgtcggaccaggcttggatgtgggccggcatgaattacgccgagcaggaaccg
tgcgtcgaacagttagcagtcaaatttaaatcgcccgatctagctcgacaattcaaggcg
catattgataacgttcagcaagaattacgtgataagagaactactgaaggtgaaagatgc
atcggcgaaacggaagacagcgaagagcacgaccgaggcaacgacgtagaggaggagcaa
gaggaggaagaagaggacgaggaggaggacgaagaggacgatcatgagattcctataatc
gagaaacgtgccactgtgttcgcgagatggcctaacgacaccaagtgggaaagtgtgggc
ttagggaacctggcaatctattatgattccgagatctacgcggaaagaatcgttctgaag
cttgacgactcggaggagtatgcgagcaacaccatcatcagcatggatacagtgatgcgg
gtggaaggcaaggagtgtatttggagcgggattgattacgctttggaccctccagggagg
agagttctgagggcagtgttctcgtcggtgcaagcagcgcaacagatgcatacgtttttc
gaagatggagtggactgcgcgaagcaagccggtgtcgtcgagtatcaagaagcagaatga
DBGET
integrated database retrieval system
