Temnothorax longispinosus: 139820808
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Entry
139820808 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139820808
04121 Ubiquitin system [BR:
tln04121
]
139820808
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139820808
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139820808
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139820808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Vgb_lyase
ATP-grasp_IQCH
Motif
Other DBs
NCBI-GeneID:
139820808
NCBI-ProteinID:
XP_071647441
LinkDB
All DBs
Position
10:5668640..5686023
Genome browser
AA seq
976 aa
AA seq
DB search
MQRFYPPASDTRGQLYCVNVQSSKALILERYTSIDIRESMLAARQYDCFAEGRTYERKTR
FFNRATQESSLELYQQFLPTTMNQLKSPRNRIDCNRHPMQLTNKPRKQDDQHFTPKKYTI
AKKVRSFPDSSPDRFPKQFSPGNMSQQHSNTLTRSILSRADSLNEYPRLYSQNSMLASSL
SCSSESRSSSSDDNLANHSPIHQLDTGSPDHFEYFRVFENASVTDMPGPSFSGASYRSES
CQAGYETFEDLNMNLLKIDLLDDISPRRQSPVREERGAKRDVLNESFITLMTKELEKDES
DITVPSREQRTRSPSSQRDSSDLPLIPSISEELEVASEIKKENYSGQQSPAGEQWTHGLN
VEEDASSAISAKEEAAKETEEDQSFDSLRAMMSPYQCNDHPCTQFLYCQTCCKTICKECA
THCIYKHVTVDFMEFLENAQRQAEDVLIEAYLGIDVLADDMENMGLDIAALDQRTREALS
DVKFFSRRMWSAVEEREKKLFKQIVETRRWKYEVLHEKYMNLKEDKIRLSQAVNALKGAI
HDARSSPACSPDDLLQRKDMVLAEIWQIRQSRKTKARSARDENWISFRSSDSNVLSVIAN
GGNVLVNGPGTIGDRLPNRDYKSSQSYFPYGMSDQMIQPIPRGRPITDYDRNICLPNRKH
ELQVKSTDVIILGYFGENNPDNLCRPWGLICDNEGNIIISDRSNNRIQIYREDGTLIRKF
GSYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRVQILTMEGEFLRSFGEHGEKQGQFCYP
WDVAVNSACEIAVTDTRNHRVQLFSPEGIPLRMFGGQPHLLRYLDSPRGICFNNEGKLIV
TDFNNHHVLIIEYNMVEMRILKCEKETKGKRQDGETGDGQNEENTPTFQRPQGVIAADDG
SILVADSRHNSIKAFNSVGSLIYSYKPGQEEMDRPLGIALHWDGRMVFTDYGRNYVRLVK
LEHHMDPVPRNAIMFG
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattctacccgcctgcatctgacacgaggggccagctgtactgcgtcaatgtc
cagtcgtcgaaggcgttgatcctggagagatacacgagcatagatatccgggaaagcatg
ctcgccgcacgccagtacgactgcttcgcggaggggcgcacgtacgagaggaaaacaaga
tttttcaatcgtgcaacccaggagagctccctggagctttaccaacaattcttgcccacc
acaatgaatcaattaaaatccccccgcaacagaatagactgtaaccgtcatcccatgcaa
ctcacaaataagcctcggaagcaagatgatcaacactttacgccaaagaagtataccatc
gctaagaaggtccggtcgtttccggactccagtccggatcgcttcccgaagcagttttct
cccggaaatatgtcgcagcagcattccaacacgttgactcgttcgatcctcagtcgtgca
gattccttgaacgaatatccgaggctgtacagtcaaaattcaatgctggccagttcgcta
agctgttcgagcgagagtcgatcgagctcctcggatgacaatctagcgaaccattcgcca
attcaccagctggacaccggctcaccggaccacttcgagtattttcgagtgtttgaaaat
gctagcgtgactgacatgcccggcccgagcttctcgggcgccagctatcgaagcgagagt
tgccaggctggctacgagacgttcgaagatctcaatatgaatcttctgaagatcgatttg
ctggacgacatctcgcccaggcgacaatcacccgtacgcgaggaacgtggcgctaagagg
gatgtgctcaacgaatcatttataacgttgatgacgaaggagctggaaaaagacgagagc
gatataactgtaccatcgcgggagcagcgaactcgtagcccgagtagccagagggactcg
tccgatttgccgctgataccgtcgatttcggaggagttggaggtagcgagtgaaataaag
aaggaaaattattcggggcagcaatcacctgcgggcgaacagtggacccacggcctaaat
gtggaggaggacgcgtccagcgcgatctcggccaaggaggaggcggcgaaggagacggag
gaggaccaatcgttcgattcgctgagggccatgatgtcgccgtatcaatgcaacgatcat
ccgtgcactcaatttctttattgtcaaacctgctgcaaaaccatctgcaaggaatgcgcc
actcattgcatttataaacacgtgacggtggattttatggagttcctcgagaacgctcag
cgccaggctgaagatgtgctgatcgaggcctacctcgggatcgacgttctcgcggatgat
atggaaaatatggggttggacattgcagcgttagatcagaggaccagagaggcgctgtcc
gatgtgaagttcttttcacgtagaatgtggtccgcggtggaagagagggaaaagaaattg
tttaaacaaattgtggaaacgcgccgatggaagtacgaggttcttcatgagaagtacatg
aatctaaaagaggacaagatacgactgtcgcaggccgtcaacgctctcaaaggcgccatt
catgacgcgcgatcgtccccagcgtgcagtcctgacgatcttctgcagagaaaagatatg
gtgttggccgagatctggcaaattcgtcagagccggaagacaaaggcccggtctgctcga
gacgagaattggatctccttcagaagttccgacagcaacgtgctgtccgtgatcgccaat
gggggaaacgtcctggtgaacggcccgggcacgatcggggaccgtctaccgaatcgcgat
tacaaatcgtcgcaatcgtacttcccgtacggaatgagcgaccagatgatacaaccgatc
ccacgtggtcgtccgataacggactacgatcgcaatatctgcctccctaaccggaagcac
gagttgcaggtcaagagcacggacgtcataatcctcggctactttggcgagaacaatcct
gacaatctttgccgcccgtggggattgatttgcgacaatgagggtaacatcattatcagc
gatcggtccaacaatcgtatacagatctatcgcgaggacggcacactgattaggaaattc
gggagctatggcaatggcccttgtcaatttaatcgtccagctggaatcgctgtcgatgct
agacgccgccttatcgtggtcgacaaggataatcatcgcgttcagattctgacaatggag
ggcgagtttctgaggtccttcggcgagcacggcgaaaaacagggccaattctgttacccg
tgggacgtggcggtgaactcggcctgcgagatcgccgttacagatacgaggaaccaccgc
gttcagttgttcagccccgagggtatccccctgcgcatgttcggcggccaaccgcatctg
ctgaggtacctggactcgccgcgcggtatctgcttcaacaacgagggcaagctgattgtc
acggacttcaacaatcatcacgtattgataattgagtataacatggtggagatgcgcata
cttaaatgcgagaaggagacgaaaggcaagaggcaggacggggagaccggcgacgggcag
aacgaggagaacacccccacgtttcagagaccccagggcgttatagcggccgacgacggc
agtattctcgtcgcggactcccgtcacaattcaatcaaagcgttcaactcggtcggctcg
ttgatctactcgtacaagcccggccaggaggagatggaccgtccgttgggcatagctctt
cactgggacggtagaatggtgttcacggattacggccgtaattacgtgcgcctggtaaag
ctggagcaccacatggacccggtgccaaggaacgctatcatgtttggttga
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