Entry |
|
Name |
(RefSeq) sodium channel protein Nach
|
KO |
K03440 | acid-sensing ion channel, other |
|
Organism |
tln Temnothorax longispinosus
|
Brite |
KEGG Orthology (KO) [BR:tln00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:tln04040]
139820909
Ion channels [BR:tln04040]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
139820909
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
10:17797112..17801423
|
AA seq |
609 aa
MKSSRRSKKLQYASDNISSHSVPLACASLFFISINAVASGNMKTSKFDNLKHRYRKSLAY
GVKKYLGWFHIFCENTSLHGFRYITLSGSSIIENVFWFVICKSSIVFCVILMLRLWANYS
NNPIVTTIYTSNSIWDVSFPAVTICNNNKVYRPHADGIAEYLYSNGFTAEDSDKFFSSLM
KLIRPDKISMDNVTARQLLDNFDFTVEALMEKLMQPCSALLLRCAWIGKIHDCDKIFKTV
KSKEGFCCAFNSHYDLNVKQTSNDTRSNSTDFHVTSDDLPGVRKVLNAPGSGRDVGLAVA
LNIEPNMYKATSRPYVGASVMIHDPIDFPDIGAHVASVPPGHVLAVSVTGTSIRGMESLR
NMPLEKRMCYFDNEKPGEARYSYQSCLSDCIAEHTYRLCGCLPFYYPEAHKGKRTCYLPD
INCLLSIRKLIPEHAKTCTTCLPQCTDMMYQINPEDIKMEDVGFDSDLTHGFDINNVSFV
YVFFGDISYVEYRKESIISWDSLLASFGGIFGLCLGGSVMSVIELVYLLARQLFRRQPRK
SLEQSRAKLPPASEVFLSIPVREKVQQLKPRDRQKSDDKPVLVTWYQPPLHHRKTMNLTD
VYHVKHVKF |
NT seq |
1830 nt +upstreamnt +downstreamnt
atgaagagtagccgccggtcgaagaaattacagtacgcgtccgacaatatatccagtcat
tcggtccctctggcatgtgccagtttgtttttcataagcattaacgcggtagcttcggga
aacatgaagacatccaaattcgacaatttaaaacatagatatcgcaaatccttggcgtac
ggggtgaaaaaatacctggggtggtttcacatcttttgcgagaatacgagtctgcacggt
tttcgctacataactttaagcggatcgtcgataatcgaaaatgttttctggttcgtgatt
tgcaaatcgtcaatcgtgttctgcgttatactgatgctgcgcttgtgggcgaattactcg
aacaatcccatagtgacgacaatttacacgtcgaattcgatatgggacgtgtcttttccg
gccgtcactatatgcaacaataataaggtttaccgtccacacgccgacggtattgccgag
tatttatactcgaacggattcaccgcagaggacagcgacaaatttttttcatctctaatg
aagctgatacgacccgataaaatttcgatggacaatgtgaccgcgagacagctcctcgat
aatttcgatttcacggtcgaagcgctcatggagaagttgatgcagccttgcagcgcgttg
cttttgcgatgtgcctggatcggtaagattcacgattgcgacaagatcttcaaaacggtc
aagtccaaggagggtttctgttgcgctttcaattcccactacgacctaaatgtcaaacaa
acgtccaacgacacgcgctccaattccaccgacttccacgtcacctctgacgatctgcct
ggtgtgcgcaaagttctgaacgcgcccgggagcggccgcgacgtgggactcgcggtcgcc
ctgaacatcgagcccaatatgtacaaggctacttcgcgcccttacgtaggggcctccgta
atgatacacgacccgatcgattttcctgatatcggtgcacacgtcgcgtccgtgccaccc
ggtcacgtcctggcggtatccgttaccggcacgtccattagaggcatggaaagtttgcgg
aacatgcccctagagaaacgtatgtgctacttcgacaacgagaaaccgggcgaggctcgc
tacagttatcaatcgtgcctatcggattgtatagccgagcacacatatcgtctgtgcggc
tgcttgccgttttattacccggaggcgcataaggggaaaaggacatgttacttgcctgac
ataaattgccttttgagcattcgaaaattaataccagaacacgcgaagacttgtacgact
tgcctgcctcagtgcaccgatatgatgtatcagatcaatccggaagatattaaaatggaa
gacgtgggattcgactctgatctaacacacggcttcgatataaacaatgtgtccttcgtg
tatgtattttttggcgatatatcgtacgtcgagtaccgcaaggagagcatcattagctgg
gattcattactcgcatcctttggcggtatcttcggtctctgcctcggtggttccgtgatg
agcgtaatagagctggtttatctcctggccagacagctctttagaagacagccccgcaaa
agcctggagcaatcgcgtgcaaaattgccgccagcgtcggaggtgttcctgtcgatcccc
gttagagagaaagttcagcagctgaaaccgcgagatcgtcagaaatcggatgacaagcct
gttcttgtcacatggtatcaaccgcctcttcaccatcgtaaaacgatgaatctcaccgat
gtttatcacgttaaacacgttaaattttaa |