Temnothorax longispinosus: 139821545
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Entry
139821545 CDS
T10889
Symbol
Syn1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
tln Temnothorax longispinosus
Pathway
tln04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139821545 (Syn1)
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139821545
NCBI-ProteinID:
XP_071648758
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Position
11:complement(13903961..14131857)
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AA seq
591 aa
AA seq
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MPIHALKTRTACEEIEMVELCGSGQTSSAMGVMGIGAMVTAATSSSSSSTTTTTGASSSA
SGRAGILETQVRGQWYRVFVSLEDDYLSISLDESCETGNNATLNNGNINNNNVDSLNDPD
VPDSVANQKRIVRVVKSDNNGLGISIKGGKENKMPILISKIFKGMAADATEQLYVGDAIL
AVNGEDLREATHDEAVKALKRAGKIVELEVKYLREVTPYFRKASIIQEVGWELQRGFLSA
TPPPPKSPPRADTRYLPLQLCRLTRAHPSSDPEGRILELHSPDGVHECWLRAADNTEANV
WFNALHSALAALTLKALRLASALPDPQQLQHIGWLARRHCLQNGRASSESSEDGAGSSAS
TSRGAGSGFGLAAGCTGGWRSVFGAVSGRELRLYECAPWSPEAWASPSITCPLIATRLVS
TPTRQNEAASSSSGSTQHGATFAVRVGTMDGVVTHHLRAETRRDLAAWARAIVQGCHAAA
HSLREYTVRCTWQGKACQLVVNHEEGFALYAAGTRGTAGNGVSPASPPTPLWRRSFDKLK
MSADDGARLLWLDFGGEDGEIELDLESCPKPIVFVLHNFLSAKIHRLGLSA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcctatacacgcgcttaaaacgcgtacagcctgcgaagaaatcgaaatggtagagctg
tgtggtagcggccaaacatcttcggccatgggagtaatggggattggcgcgatggtgacc
gcggcgacgtcgtcgtcctcctcgtcgaccaccacgaccacgggcgcctcgtcctcggca
tcgggacgcgccggtatactcgagacccaagtgcgcggccagtggtatcgcgtgttcgtc
tcgttggaggacgattatctcagcatttcgctcgacgagagctgcgagaccggtaacaac
gcgaccctgaacaacggcaacatcaacaacaacaatgtggacagtctgaacgatccggat
gtgcccgattcggtggccaatcagaagcgcattgttcgcgtcgtcaaaagtgacaacaac
ggtctgggaatttcgatcaagggcggcaaggagaacaaaatgccgattctcatctcgaag
attttcaagggcatggcggcggacgctaccgagcagctttacgtcggcgacgccattctg
gcggtgaacggcgaggatctgcgcgaggccacgcacgacgaggcggtgaaggcgctgaag
agagccggcaagatcgtcgagctagaagtgaagtacctgcgggaagtgacgccgtacttc
aggaaggcttcgatcatccaggaagtgggctgggaacttcagcgcggtttcctgagcgcg
acgccgccgccgccgaagtcaccaccgcgggcggatactcgttatctgccattacaactc
tgcagactcaccagagcgcatccctcttccgatcccgaaggacgtatcctagaattacac
tcgcctgacggtgtccacgaatgctggttgagagccgctgacaacacggaggcaaatgtc
tggttcaatgctttgcactcggcgttggcagccctcaccttgaaagcattacgactggcc
tcagcacttccggacccgcagcagcttcagcacataggctggctggcgaggaggcactgt
cttcagaatggacgagccagtagtgagagcagcgaggacggggccggaagtagtgcgagc
acttcgcgaggagccgggagtggattcggtcttgccgctggatgcaccggcggatggcgc
agtgtctttggtgcagtttcaggccgggaacttagattgtatgagtgcgcgccttggagc
ccagaagcgtgggcttcgccgagcattacctgccctctcatcgcgacacggctggtctcc
actcccacgcgacagaatgaagcagcgagcagcagtagcgggtcgactcaacacggggcg
acgttcgcggttcgggttggcacgatggacggggtagtcacgcatcatttacgagctgaa
acacgaagagatctggcggcctgggcaagggcgatcgttcagggatgccacgcggccgct
cattccttacgggagtacaccgttcgttgcacatggcaaggcaaagcctgtcagttggtt
gtcaaccacgaggaaggtttcgcgctttacgccgcaggaacgcggggcactgccgggaac
ggcgtaagtcctgcttcaccgcccacgccactctggagaagatccttcgacaaattgaaa
atgtccgcggacgacggcgcccgtcttctgtggctcgattttggaggcgaagacggcgaa
attgagcttgatttggagagctgtccgaaaccaatcgtgttcgttctgcacaacttcctt
tcggcgaagatacatcggctcggtctgagtgcatag
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