Temnothorax longispinosus: 139821672
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Entry
139821672 CDS
T10889
Symbol
Dnalig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tln Temnothorax longispinosus
Pathway
tln03410
Base excision repair
Brite
Enzymes [BR:
tln01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139821672 (Dnalig3)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
139821672 (Dnalig3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139821672
NCBI-ProteinID:
XP_071648991
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Position
11:16814707..16849046
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AA seq
1014 aa
AA seq
DB search
MSSDEEDQQQQQQEEEKPFAVERAKTGRAKCKKCKCPIEKGEIRIAKYVTSFFSDGKLMP
AWHHVTCLFDVFAKQRATTKKIDDPAEDVKGWEQLSDDDRKVILDKLEAFEKSFPAKGAK
KTTSPGKAASSSNSSGKTVKKNLDRKKVETDDKEKDKEKDKERKSKIPSKDDSFREFRRI
CSNVADVDAYTDKTAIIKRMFTKGSLGDGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIKL
FARLLLQDEDAMLEHLEQGDVAETISVFFENSAAVSPCAASVLTIQDVDLFLENLSRLTK
EEEQIQHFRSILDKCTANDLKMIVRLIKHDLRINAGPKHILEGLHADAYKAFQMSRDLEA
VVRRFLPNLEDKLHASSSPLSRKKVAISLMTPVLPMLAEACTSVEMAMRKCPNGMLSEVK
YDGERVQVHKCGNDFRYFSRSLKPVLPHKVNLFKDYIVQAFPDGDDLILDSEVLMVDNET
GQPLPFGTLGIHKKAEFKNANVCLFVFDCLYYNSEILIDKSMLERRNILKDRMTEIPNRI
MLSEVHEVHDPRDLAERIVQVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMAD
SADLVVLGAWYGTGNKGGILSVFLMGCYDERRGKWLTVTKVHTGHDDATLALLQDQLDMV
KIGKDAEKLPSWLLAKKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVT
RIRHDKDWSTATTLNELRRLFQKKPESADFDRLFGTLADVKDVSKRKKLPDSANTSPRKN
ESVKTASWDAPSTSSKVKEEPMDVKKEVKRIPLSEETRKRQKGDECDDGSSDKVRSEKKK
AKVKRDIKDEMKDFPSTRFKKEERSEIKREREDCIDHFASGTEGSFESSFDASVFDSDTE
DVKFNNVLQDMRVSLAPDFDTSRRKDARRMLKTLGATIVTPANGHDLTATHVIHTRAEIP
SSAVLGDFTDFPRTAKHVNVSWLEETAARSRRQDEVRHAVQLTGDYCDCPCTHR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgatgaggaggatcaacagcagcaacagcaggaggaagagaaaccgttcgcc
gtggaacgcgcgaaaaccggccgcgcaaaatgtaagaagtgcaaatgtccgatcgagaag
ggcgagatacggatcgccaagtacgtgacgagcttcttctcggacggcaaactgatgccg
gcctggcaccacgtcacctgtctgtttgacgtgttcgcgaaacaacgtgccaccaccaag
aaaatcgacgatcccgcggaggacgtgaagggttgggagcaattgtccgacgacgacagg
aaggtcatcttggacaagctggaggcattcgaaaaatcatttccggctaagggtgcgaag
aagactacatcgccaggtaaagcggcctcttctagtaattcttcggggaaaacagtaaag
aagaatttagatcggaagaaggttgaaacggatgataaagaaaaagataaagagaaagat
aaggagagaaagagcaaaatcccgtcgaaggatgattcctttcgcgaatttcgacgtata
tgcagcaacgtcgccgacgtcgacgcttacactgacaagactgcgattattaagaggatg
ttcacaaaaggatcactcggagacggttttaagggcgacatcgtgctctggtgcaaactg
ttgctgcccggcgcggtgaagagaatttacaatctgcagagcaagcagctgataaaattg
ttcgcgcgattgctgctccaggacgaggacgcgatgctggaacatctggagcaaggcgac
gtggccgagacgatcagcgtgttctttgaaaatagcgctgccgtgtcgccttgcgccgcg
agcgtgttgacaattcaagacgtcgatctctttttggaaaacttgtcgcgtttgaccaag
gaagaggagcagatccagcattttcgatctatccttgataaatgtaccgccaacgatctg
aagatgatcgtgcgtctgatcaaacacgatctgagaatcaacgccggaccgaaacatatt
ctcgaggggctccatgcggatgcgtacaaggccttccagatgtcccgagatctggaagcg
gtagtgcgacgtttcctgccgaatctagaggataaactgcatgcctcgagctcgccctta
agccggaaaaaagtggccatttcgctgatgacgcccgttttaccgatgctggcagaggcg
tgcacgtccgtggaaatggcgatgcgaaagtgcccgaacggaatgttgtcggaggtcaag
tacgacggcgagcgcgtgcaggtgcacaaatgcggaaacgactttcgatacttcagcaga
tccctcaagccggtcttgccgcacaaggtgaatctcttcaaggattatatagtgcaggcg
tttcctgatggcgacgatctaatcctcgattctgaggttctcatggttgacaatgagact
gggcaacctttgcctttcggcaccttaggaattcataaaaaagccgaattcaaaaacgcc
aatgtatgcctttttgtcttcgactgcttatattacaacagcgaaatacttatagacaaa
tctatgttggagcgcaggaacatcttgaaggacaggatgaccgagataccgaacagaata
atgttgtcggaggttcacgaagtgcatgatccacgggatttagcggaaaggattgttcaa
gtgttgaaactgggtctcgagggtttggttctgaaggacatcgatagcaaatacgagcca
ggcaagaggcactggttgaaggtaaaaaaggactatctgtgtggtggtgcgatggctgat
agcgcagatctcgtcgtacttggtgcatggtacggcacgggcaacaaaggcggcattctg
tcggtctttttaatgggctgctacgacgagaggcgcggcaagtggttaaccgttaccaaa
gtacacactggacacgacgatgccaccctggcgttattacaggaccagctggacatggtg
aagatcggcaaagacgcagagaagttaccgagctggttacttgccaaaaaacccatggta
ccggatttcgtggcgagagatcccaagaaacagccagtatgggagataacgggagccgag
tttacgaatcaaggagtgcatactgcagacggcatcagcatccggtttccgcgtgtcacg
cggatccgccacgacaaggactggtcgacggccaccaccctgaacgagttgcgtcgcctc
ttccagaagaagcccgaatccgccgatttcgatcgcttgttcggtacgttagcggatgtc
aaggacgtctcaaagaggaagaagctgcctgattctgcgaacacgtcgccgaggaagaac
gagagcgtgaaaacagcctcgtgggatgcgccatcaacgagttccaaggtcaaggaggag
ccgatggatgtcaaaaaggaagttaagaggataccactgtcggaagaaacccgaaaaaga
caaaagggagatgaatgcgacgatggatcatccgacaaagtccggtcagagaagaagaaa
gcgaaagttaaacgcgatattaaggacgaaatgaaggatttcccgtcaacaaggttcaag
aaagaggagagatcggagataaaacgggaaagggaggattgcattgatcatttcgctagc
ggaacagaaggatctttcgagtcttcgttcgatgcgagtgtctttgattcggacaccgag
gatgtcaaatttaataatgtgctgcaagacatgcgagtgagtctcgcgcctgatttcgat
acaagcaggaggaaggacgcacgaagaatgcttaaaacactcggcgccaccatagttacg
ccggcgaacggacacgatttgacggcgactcatgtcattcatacacgcgcagaaattccg
tcctcagccgtcctcggggactttacggactttccgcggaccgccaagcacgtgaacgtg
tcttggctggaggaaactgcggcgcggtcgaggaggcaggatgaggtccggcacgcagtc
cagctgactggagattattgcgattgtccgtgcacgcatcgataa
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