Temnothorax longispinosus: 139821873
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Entry
139821873 CDS
T10889
Name
(RefSeq) uncharacterized protein
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tln03000
]
139821873
Transcription factors [BR:
tln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139821873
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
139821873
NCBI-ProteinID:
XP_071649337
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Position
11:19183361..19236828
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AA seq
388 aa
AA seq
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MRAGGNMCDGSFPEALRMSVQGMTGTSPPGSVSHMAVAGLAGGSALGSAGKKMQAEHIKR
PMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMK
EHPDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMASGMGQAAMGSYYTPAAAYGS
LSAASMAAAAAAAAQQSMSSLAAPAQVSMDAMKYSMEADKYRAAYMPPSTLAMSMYPDPK
YLDSSNAKAYCLDRTYLDAKAYFEQSKLYMDQKPTIEYNRPSYEPNKLYEESSPGSIVGG
SGPARSPPAESPDTSKQHERTEQGSSSASSTSTSSAASPGAPLPTAYYPGSVQPGGLLAP
QMGQYPPAYQMSPASGSESSFRRPLVIL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaatatgtgcgacggctccttccccgaagctctccgcatgagcgtt
caggggatgacgggtacatctccaccgggtagtgttagtcacatggcagtagcgggcctc
gcggggggtagtgcactcggttcggcaggcaagaagatgcaggcggagcacatcaaacgg
cccatgaacgctttcatggtttggtcacgattacaacgacggaagattgcgcaagaaaat
ccgaagatgcacaatagcgaaatttccaagagactcggcgcagaatggaagctcctcacg
gaagatgagaaacgcccattcatcgaccaggcgaagaggttacgtgcacaacatatgaaa
gaacatcccgattataagtacagaccgcgaaggaaacccaagacattgcggaaagaaggc
tatccctacagcattccgtacccaagtgttcccatggatgctcttcgtgccggaatggcc
agcggcatgggacaggcagcaatgggctcctattacaccccagccgcagcttatggctcg
ctatcagcggctagcatggctgcagccgcagcagcggctgcacaacaatccatgagtagc
ctcgcggcacctgctcaagtttcgatggacgccatgaagtactctatggaggctgacaag
tatcgcgctgcctatatgccgcccagcactctagcaatgagcatgtacccagatcccaag
tacctggattcatccaatgctaaggcctactgcctggaccgtacctacttggacgcgaaa
gcgtacttcgagcagtcgaagctgtacatggatcagaaaccgactatcgaatacaatcga
cccagctacgagcccaacaagctttacgaggaatccagcccgggcagcatcgtcggcggt
agcgggcctgcaaggtcaccgcccgcggaatcgccagacacgagcaagcaacacgaaagg
acggagcagggctcgtccagcgcgagttcgacgtcaacgtcatcggccgcgagcccaggc
gcacctctgccgacggcttactatcccggatcggtccaacccggcggcttactggctccg
cagatgggccagtaccctcccgcgtaccaaatgtcaccggcatcgggaagcgagtcctct
tttcgacgaccgttggtcatcttgtga
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