Temnothorax longispinosus: 139821877
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Entry
139821877 CDS
T10889
Symbol
Arr
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
tln Temnothorax longispinosus
Pathway
tln04150
mTOR signaling pathway
tln04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139821877 (Arr)
04150 mTOR signaling pathway
139821877 (Arr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139821877 (Arr)
Membrane trafficking [BR:
tln04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
139821877 (Arr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
DUF5050
Vgb_lyase
cEGF
EGF
PRKCSH-like
Ac76
Motif
Other DBs
NCBI-GeneID:
139821877
NCBI-ProteinID:
XP_071649357
LinkDB
All DBs
Position
11:complement(12442166..12454603)
Genome browser
AA seq
1634 aa
AA seq
DB search
MITWSVWLAIACLLCCGVFFCDGSPLLLFATHKDIRVANMSRNNKVNVIIKDLSEGASLD
FFYERGLICWSDSGLEMIQCIRYNGTHSGERMTVVNSSLISPDGLACDWYTDKLYWTDGE
KNRIEVTSIDGRNRKVLFWTDIYQPRAIALAPMEGYLFWTDWGDVPKIERASMDGDQSTR
EIIVSDDIFWPNGLTVDYENKLIYWADGRLWFIAVMDYNGRNRRKLVTRDLDYPFAITFF
DNRLYWTDWKTWCIHSYDMNQSQSHPRELFHGEYIPGDIEVWDARRQPGGDNPCRRNNGN
CSHLCLLSSVEPGYSCACPTGVKLINKYTCAKRPEELLLIVQRTEICRISLDSPDYTNFV
LPLTGIKHAIAIDFDPVDELLYWTDEQTYAIRRAPLDGLSQQNVISTEVANPDGIAIDWI
ARNLYWTDTGTDRIEVARLDGKYRRVLVNEDLFEPRAIAVAPEHGWMFWTDWSEKRPKIE
RSNLDGSERMLLITKDIVWPNGIALDLERKKIYWCDAKTDKIEVSNMDGTDRREVITDNL
PHLFGLSLLGDYLYWTDWQRRSIDRAHKLTGGDREVIVDQVPNVMGIKAIHLGRMNTSNS
PCARDNGGCSHLCFNKPNNRYVCACQMGYELTKDKRTCVIPDAFLLFSRRENLGRISIEN
VNNDNVIPVTGIKDASAIDFDLSENRIYWTDIKLKAISRVFINGSDIEKIVDLGLESPEG
IAFDWIAHNLYWSDTSMHRIEMIRIEGGSRKILVWQNLIEPKNVAVDPQRGHLYWAEWGN
TGSIERALLDGTQRQVIVLHIGRANGLTIDYIGRKLYWADISVPAIDYYDLLTQRRDVIV
SYHIVYPFSVTQYRDYIYWADWNTGDIERADKLTGANRTKIHTNLASVTDLKVFHASRQA
GSNPCAIANGNCSHLCIALPDPIGSASVAHKCACPTHYNLARDNRTCLAPQHFMIYSLRS
TIARYLPDQTDDCADVTLRVQGLKNVRAIEFDPITQHVYWIDGRATIRRALENRTQQQHS
GTVVVSIGNGHAFDLALDPLGRLLFWTCSTNDALNVTRLDNGSALGVVVKGDGEKPRHIA
IHSQQRLLFWTDVGKKRVVRSKMDGKERHVIAGDLLEQPTGLTVDTVTYVVYWSYGRHIE
CSNFEGGNRKLLASTTQGPALHLAVLFDYLYWYDRDAQVIERVNKTFDGINRRGTRMTTV
RVFTDLIAINMPKDSLMETHVCSPFNDYGGCSHFCVGTNTVADESTTTSPRCSCPKSLVL
SDDGRTCRAAPVCGNDHFTCAAPNAAVSKDCIPATWKCDGQTDCSDGSDELGCPTCSRNQ
FKCQNHCIELSWVCDGTQQCPDGSDEAQCCQAGQFQCVGNGVCISGASLCDGWDDCADGS
DELPPACLSPHNPHRQDAGPGINESSKMTYIIIILVVLFVIVAGVLSYYYCRKRFTGNEG
LPDILHDSAGDPLSPKPSSNSRMVKPMFVSQKIRKDGAGSGVLEVGMEAVRMSMLNGSSL
GSSYDRSHITGASSSTRGSSAGGYPQETLNPPPSPATIVSSTRCSSSNASRYKPYRHYRS
INQPPPPTPCSTDVCDESDSNYPARYRYESEPFPPPPTPRSVYHSDAAISCPPSPSSRSS
TYFSPLPPPPSPVP
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtggagcgtgtggctcgctatcgcctgccttctctgctgtggcgtttttttc
tgcgatggctcgcctcttcttctttttgccactcacaaggacatcagggtggctaatatg
tctcgcaacaataaggtcaacgttatcatcaaggacttgtcagaaggcgcgtcattggat
tttttctatgaacgcggactgatttgctggtctgacagcggtctggagatgatacagtgt
atacgctataacggtacacacagcggcgaaaggatgacggtggtgaactccagtttgata
tcgcccgatggtcttgcttgcgattggtatacggacaaactgtattggacagatggtgag
aagaatcggatcgaggtgaccagcatcgatggccgtaataggaaggtactcttctggaca
gatatctatcagccgcgcgcaattgccctggcaccgatggaaggatatcttttttggacc
gattggggcgatgtacctaaaattgagcgcgcttcaatggacggtgatcagagtacgcgt
gaaatcatcgtgtctgacgatatattctggccgaatggtttgacagtcgactatgaaaat
aagctcatatattgggcggacggtagactgtggttcatcgccgtgatggattataacggc
cgtaatagacggaaattagttactcgtgatctggactacccgtttgctataacgtttttt
gacaatcggctctactggaccgactggaagacctggtgcattcactcgtacgatatgaac
cagtcgcaatcacacccacgcgaattgtttcacggcgaatacatacctggtgacattgag
gtctgggatgcgaggagacaaccgggtggtgataatccctgcaggcgaaacaacggcaat
tgttcccatctgtgccttctgagctcagtggagcctggttacagctgcgcctgtcccaca
ggcgtcaagctaatcaacaaatacacatgcgccaagagaccggaggagctgctgctgatc
gtccaacgaactgaaatctgccggatatccttggattcgcccgattacacaaactttgta
ttaccgctcacgggtattaagcatgcaatcgcgattgactttgatccggtggacgaattg
ctgtactggactgatgagcaaacgtacgccatcaggcgagcccctctcgacggattgagt
cagcagaatgtgatttccacggaggtggcgaatccagatggtattgcgatagattggatt
gcccgcaatctctattggaccgataccgggaccgatcgaattgaagtggcgcgactagat
gggaaatatcggcgtgtgctggtgaacgaagacctgttcgagccgcgagcgattgcggtc
gcacccgagcacgggtggatgttctggaccgattggagcgagaaacggccaaaaatcgag
cgcagcaatctcgatggtagcgagcgcatgttactgatcaccaaggacattgtgtggccg
aacggtatcgccttggacctcgagcgcaagaagatctactggtgcgacgcgaaaaccgac
aagatcgaggtgtccaacatggacgggaccgatcggcgcgaggtcattactgacaatctg
ccgcatctgttcggtctcagcctgttgggcgattatctgtactggaccgactggcagcgc
cgcagtatcgatcgggcgcacaaactcactggtggcgatcgtgaagtcatcgtcgaccag
gtacccaatgtgatgggaatcaaggctatacatcttggccgaatgaacaccagcaattcg
ccgtgcgctcgtgataacggtggatgcagccatctctgtttcaacaagcccaacaacagg
tatgtctgcgcctgccagatgggctatgagttgacaaaggacaagcgcacttgtgtcata
ccggatgccttcctgctgttctccaggagggagaatcttggccgtatcagtattgagaac
gtcaacaatgataatgttataccagtcactggtattaaagacgctagcgctatagatttt
gacttgtccgagaaccgcatttattggacggatattaaactaaaagctatctcacgtgtc
ttcataaatgggtcagacatcgaaaaaatagtcgatctcggcctagaatcgccggaaggt
attgcattcgattggattgcacacaatctctattggagtgatacctctatgcatagaata
gagatgataagaatagaagggggtagcagaaaaatactcgtgtggcaaaatcttatcgaa
cctaagaatgtggctgtggatcctcagagaggtcatctatactgggccgaatggggcaat
accggcagtatcgagagggcattattggatggcacgcagcggcaagtgatcgttttgcac
atcggccgggcgaacggtctgacaattgactatatcgggcgcaaattgtactgggctgac
atctccgtgccagcaattgattattatgatctactaacacaacggagggatgtcatcgtt
tcgtatcacatagtctatccgttcagtgttacacagtatcgggactacatttattgggca
gattggaatacaggtgacatcgagagggcggacaaactcactggagcgaatcgtaccaag
atccatactaatctggcgtcagtgacggatctgaaagtgtttcacgcgtcgcgacaggcc
ggctcgaacccgtgcgcgatcgcaaatggcaattgcagccacctctgcattgctctgcca
gatccgattggcagtgcatccgttgcccacaaatgcgcgtgtcccacgcattacaatctg
gcgcgggacaatcgaacctgtctagcgccacagcattttatgatctacagtctgcgcagt
acgatcgcacgttatttacctgatcagacggatgactgcgcagacgtgacattgcgcgta
caaggtttgaagaatgtccgcgcgatcgagttcgatccgataacgcagcacgtctattgg
attgatggccgcgcaacaatccgtcgtgccctggagaaccggacacaacagcagcacagc
ggcacggttgtggtttccatcggaaacgggcatgcatttgatcttgcgctagatccgctc
gggaggctgctcttctggacatgctcaacaaacgacgctcttaacgtcacacggctggac
aatggctcggctctcggcgttgtggtgaaaggtgatggcgagaagccgcgtcatatagcg
atccactcgcaacagcgattgcttttttggacggatgtgggcaagaagcgggtggtacgc
agcaagatggacggcaaggagcgtcatgtgatcgctggcgatttgctggaacagcccact
ggcttgacggtagataccgtaacgtacgtcgtctactggtcgtacggcaggcacattgaa
tgctccaacttcgaaggcggcaatcgcaagcttttggcctccaccacacagggtccggcc
ctgcacttggccgtcctttttgactatctctactggtatgatcgcgatgcgcaggtgatt
gaacgggtcaacaagacgtttgatgggattaataggcgaggcacgcgcatgacgacagtt
cgcgtgttcacggatctcatcgcgatcaacatgcctaaggattcgctcatggagacacac
gtgtgcagcccgtttaatgactacggtggttgctcgcacttttgcgtcggtacgaacacg
gttgctgatgagtccactacaacgtcaccccgttgctcgtgcccgaagtcgttggttctg
tccgacgacggtcgaacttgtcgcgcggcgcctgtgtgtggaaacgatcactttacatgt
gctgcgccgaatgcggccgtgagcaaggattgtataccagctacgtggaagtgcgacggc
caaactgactgttcagatggcagcgatgagctgggatgtcccacgtgctcccgcaatcaa
tttaaatgtcagaatcactgtattgaattgtcttgggtatgcgatggaactcaacagtgt
ccagatggctcggacgaggcacaatgttgccaggctgggcaattccagtgtgtgggaaat
ggtgtctgcatctctggggcatcgttatgcgatggctgggatgactgtgccgatggcagt
gatgagctaccaccggcttgccttagtccgcacaatccgcatcgtcaggacgccggaccc
gggattaacgaatccagcaagatgacctatatcattatcatcttggtagtgttattcgtg
atcgtagcaggtgttctaagctactactactgtcgtaaaaggtttaccggaaacgaaggt
ctgcctgacatactacacgattcagcgggagatccactgtcgccaaaacccagttcaaac
agtcgaatggtgaagccgatgtttgtttcgcaaaagatcagaaaggatggagcaggaagt
ggagtcttggaggttgggatggaagccgtaaggatgtccatgttgaacggaagtagtctt
ggttctagttacgaccgcagtcacattacaggtgcgtcaagttctaccagaggaagttcc
gcgggtggatatccccaggagactctgaatccgccgccaagtccggcaacaatcgtcagt
tcgacgcgttgctcgagcagtaacgcgtcgcgttacaagccgtatcggcactacaggagc
attaatcaaccaccaccaccgactccgtgtagtaccgacgtctgtgatgaatcggacagt
aattatccagcgcgttatcgttatgagagcgaaccattcccaccgccgcccactccacgt
tccgtctatcatagcgacgcggcgatcagttgcccaccatccccaagttccagatcgtcc
acgtattttagtcccctaccgccaccaccgtcgccagtgccttga
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integrated database retrieval system
