Temnothorax longispinosus: 139822057
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Entry
139822057 CDS
T10889
Name
(RefSeq) uncharacterized protein
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tln03000
]
139822057
Transcription factors [BR:
tln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139822057
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139822057
NCBI-ProteinID:
XP_071649676
LinkDB
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Position
11:19092239..19097640
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AA seq
333 aa
AA seq
DB search
MKDDLRLKMTKYISSEQMPYNPCFSSNSDTPGFNYGFDVFSPHHLHPLYYSFPNKMPSDA
ADDTMRDGQQTHVQHEEHVKRPMNAFMVWSRQKRKEISQEHPKMHNSEISKMLGVMWKEL
PVKDKDPYVEQAKSLRNQHMKDHPNYKYRPRRKLKKMSISADPSMYITSRHCSGFPLSSV
YATSMVNPSAMPRPGYHPYHGSVHFKAMNPSASSTVSSSTVSADGNNNASFDINSLYQFY
SMPPAVGNPTTLAQHHLNLNSFFPTSQGTLGTNGLHSQLMFPSTSGSTGTAAHNYDTNES
QSASLSVPSTRPLATPTMDSDWLQRYDPAAYSR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgatttgcgattaaagatgacaaagtatatttcaagtgaacaaatgccgtac
aatccgtgcttcagttcaaactcggacacgccaggtttcaactacggattcgacgtgttc
tcacctcaccatttgcacccgctgtattattcatttcccaataaaatgccatccgatgcc
gcggacgacacgatgagagatggccagcagacacatgtgcaacacgaggaacacgtcaag
aggcctatgaacgcgttcatggtatggtcccgtcagaaacggaaggagatctctcaggag
cacccgaagatgcacaattcggagatctcgaagatgctcggcgtaatgtggaaggagctt
cccgtcaaggataaagatccctacgtcgagcaggcaaagagcctgcgcaatcagcacatg
aaggaccacccgaattacaagtatcgacctcggagaaagctcaagaagatgtcaatttcg
gcggacccgtccatgtacataacttcgaggcactgctccggtttcccgctgtcgtcggtc
tacgctacgtcgatggtcaatccctcggccatgcctcgtccgggctaccatccgtaccac
gggtccgtccattttaaggcgatgaacccaagtgcgtcgtccacggtgtcgtcgtcgacg
gtttcggctgacggcaacaacaacgcgtctttcgacatcaatagcttatatcagttctat
tcgatgccaccggcggttggtaatccaacgacattggcgcagcatcacctgaacctgaac
tcgttcttcccgacaagccagggtacactgggaaccaacggtctccattctcagctgatg
tttccttccacgtccggatctaccgggaccgccgcgcacaattatgacaccaacgaatcg
caatctgcttcgttatcggtgccatccactaggccactggctacccccacgatggattcc
gattggcttcagagatatgatccggcggcgtattcacgataa
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