Temnothorax longispinosus: 139822088
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Entry
139822088 CDS
T10889
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tln Temnothorax longispinosus
Brite
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139822088
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
90S particles
Helicases
139822088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ATPase
HA2_N
ResIII
Flavi_DEAD
AAA_30
Helicase_RecD
Herpes_ori_bp
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
139822088
NCBI-ProteinID:
XP_071649727
LinkDB
All DBs
Position
11:1048454..1054166
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AA seq
1184 aa
AA seq
DB search
MGKKRYNSKSRAVANVEVDHSTTKEIVVDIEHRAENYDSCNALVLPTQKRKTKNIDKKVT
TTRLLSKKRRKQLEKVVERKKKKLQRATLLEDLAKVQASPTELQQYVSLTSLQNKGLKRH
FRELEMPVEKLKRKADEEESDLIKSVNSIKMSKKKRLAILDGVKQDEAKLDLNIVGFESS
DSSKEEDSDNEEGNETHVLDNTTGSNVTSEKAEINEKKDEKNFTRDAEKETLSAKSQESK
KSVGEVQQNVPRVHTPAVFIPVNRKPGIQAARLKLPVVAEEQIIVETINENPVVIITGET
GSGKTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEELNLSEREVSYLIRFEGN
VTEETKIKFMTDGVLLREIQSDFLLTKYSVIILDEAHERSIYTDILIGLLSRIVPLRNKR
GNPLKLIIMSATLSVKEFVENTRLFKVKPPVIEVKARQFLVKIHFNRRTSKDYVNEALRK
AIKIHTRLPEGGILIFLTGQQEVHTVVRKLRKSFPLRKNKKPQVKVVQDSEKNETTEALD
KEHSEQEDSEDDFDAKEALRRNKQRQKKQIILPTINLDDYLINPIDDTHEDLINAQDDEE
NFDEDEDEDEDVIDFKGLTNVQPLWVLPLYSLLPGHKQARVFESPPEGCRLCVVSTNVAE
TSLTIPNIRYVVDSGRCKTRLYDKVTGVSTYHISYASKAAATQRAGRAGRTRPGHCYRLY
SSAVYDNDFEEYSQSEIQRKPVDDLLLQMKAMNIDKVVNFPFPTPPDVVQLKSAEKRLTI
LGALEPPSKKQEEIYCAKVTPLGRSIAAFPISPRYGKMLALSHQFNLLKYMICMVAALSV
PEVLIETRDMEGPTKSKWLQTRRYWAGIGNNLLLGDPMVLIRAIGTAEYAGSKGKLLSFC
EENGLRYKAMVEIRKLRQQLTNEINLNVPNLNLIIDPKMPLPTDMEAKLLRQIVLAGMVN
QVARKVSPDEVKEDQDKAKWKHAYRTPEMEEPVFMHSSCVLRKISPEWVVYQEVYETNGK
MYMRGVTAIEPEWLPKFAPMLCHLSEPLVDPPPRYNQGTGKIICRVSGTFGKAGWALPAM
DIEHPLTVDGVKWFAYFFLEGQVCPKLERFVPSLLTTPGSITKSWARLIPRTQAIIQTLQ
SQGVVSKDKLVEIWGSDKKFLLSAYQKWLPESAHAEVAQIWPPL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaacgttataattcgaagtcaagagctgttgcaaacgtggaagttgatcat
tctaccactaaagagattgtagtggacattgagcatcgcgctgagaattacgacagttgc
aatgcgcttgtcctgcccactcaaaagagaaagacaaaaaacatagataagaaggtaaca
actactcgattgttatcgaagaagcgcaggaaacaactagaaaaagtagtagaacgaaag
aagaaaaagttacagagagcaacgttgttagaagatctggcaaaagtacaagcatctcct
accgaactgcaacagtatgtgagcctaacatccctgcaaaacaagggcttgaagcgtcat
tttcgagaacttgagatgcctgttgaaaaattaaagcgtaaagcggatgaggaggaaagc
gatttgataaagtctgtaaattctattaaaatgagcaagaaaaaaagattagctattctg
gacggtgtaaaacaagacgaagctaagcttgatctaaatatagttgggtttgagtccagt
gatagtagcaaggaagaagatagtgataacgaagaaggaaatgaaacacatgttcttgat
aatactactggttctaatgtgacaagtgaaaaggctgaaataaatgaaaagaaagatgag
aagaatttcacgagagatgcggaaaaggaaacactttcagctaaatctcaggaatctaaa
aaatcagtgggagaagtacaacaaaatgttcccagagtccacacgccagctgtgtttata
cctgtaaatagaaagcctggaatacaagcagccagattgaaactacccgttgttgcggaa
gagcaaattatagttgaaacaataaatgagaatccagtagtcataataactggagagacg
ggaagtgggaagacaacgcaagtgcctcaatttttatatgaggctggatatgcgcaaaat
aaattgattggaataaccgaaccaagaagagtggcagcgatgtcaatgagcaagcgtgta
gctgaagaactgaatctttccgaaagggaggtttcgtatctgattcgttttgaaggaaac
gttacggaagaaacgaagatcaaattcatgactgatggtgttttactgagagaaattcaa
agtgatttcctattaaccaaatactctgtcattatactcgatgaagcgcacgaacgtagc
atctataccgatattttgatcggtttattgtcgaggattgttccgcttcgtaacaaacgc
ggcaatcctttgaaactgataattatgtcagctacgctgtccgtgaaggaattcgtagag
aacacgaggctgtttaaggtaaaaccaccggtaatcgaggtcaaagcgcgacagtttctt
gtaaagatacattttaatagaagaacaagcaaggattacgtcaatgaagcattgcgaaaa
gcgataaagatacatactcgccttccagaaggtggcatactaatatttttaacaggtcag
caagaggtgcatactgttgtacgtaaattacgcaaatcgtttccattgaggaaaaataaa
aagccccaagttaaagtggtgcaagactctgagaaaaatgaaacgacagaagcactggat
aaagaacatagcgaacaagaagattccgaagatgattttgatgccaaggaagcgttgcgc
cgtaataaacagaggcagaagaaacagattatactcccgactattaatctcgatgactat
ttgataaatcctattgatgacacacacgaagatttaatcaatgcgcaagacgatgaagag
aactttgacgaggatgaagatgaagatgaagatgttattgatttcaagggactgacaaac
gtgcagccattatgggtcttacccctttactctcttttacctgggcacaaacaggctaga
gtgttcgagtcaccaccagaaggatgtcgcttgtgcgtggtatctactaatgttgcagaa
acctcgctgacgattcctaacatcagatacgttgtagatagcgggcgttgtaaaactaga
ctgtatgacaaggtgacaggtgtaagcacgtatcatattagctatgcgagcaaagcagcg
gccacccaacgtgccggcagagccggtagaactcgacctggtcattgctacagattatac
tcatcggctgtatacgacaacgatttcgaggaatacagccagtcggagattcagagaaaa
ccagtggacgacttgttactgcagatgaaggcgatgaatatagacaaagtcgtgaacttt
ccatttcctacgccaccagatgtggtgcagttgaagtctgcggagaaacggcttacgata
cttggagcattagaaccgccttcgaagaaacaggaagagatatactgtgcgaaagtgacg
ccgcttggacgcagtatcgccgcgtttccgatttctccacgttacggcaagatgctggca
ctgtcacatcagttcaacttgttgaaatatatgatatgcatggtagcggctcttagcgta
ccagaagtgcttatagaaactcgcgacatggagggtccaactaagagcaaatggttgcaa
acgcgccgttactgggccggaattggcaataatttgctcctcggtgatccaatggttctg
ataagagctatcggaactgccgagtacgcaggatcgaagggaaaactgttgtctttctgc
gaggaaaatggtttgagatataaagctatggtcgagatcaggaaacttaggcaacagctc
accaatgagattaatttaaatgtgccaaatctaaatttaatcattgatcccaaaatgccg
ttaccaaccgacatggaagcgaaattgctgcgccagatagtccttgcaggtatggtgaat
caagtcgcgagaaaggtttcgcccgacgaggtaaaagaggatcaggataaggccaagtgg
aaacacgcttacagaacaccagaaatggaggaacctgtattcatgcattcttcgtgcgtt
ctacggaaaatcagtccggaatgggtggtttatcaagaggtgtacgaaacgaatggaaag
atgtacatgcgaggtgtcacggcgatagaacccgaatggttgccgaaattcgctcccatg
ctatgccatcttagtgaaccattggttgatccaccgccaagatataatcaaggaaccggg
aaaatcatctgccgcgtgtctggtacattcggaaaggccggatgggcactaccagcgatg
gatatagagcatccattgacggtggacggtgtcaagtggttcgcgtatttcttcttggag
ggtcaagtgtgccctaagctggaacgatttgtcccgtcgctgctgacgacacctgggagc
atcaccaagtcatgggccaggttgataccacgcactcaagcaataatacaaacgctgcag
tcgcagggagtcgtgtccaaagacaaactggtagaaatctggggttcggataaaaaattt
ctattgtcagcctaccagaagtggctgccggaatccgcgcacgcagaagtggcacagata
tggccgcctctctaa
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