Temnothorax longispinosus: 139822436
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Entry
139822436 CDS
T10889
Symbol
Dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tln Temnothorax longispinosus
Pathway
tln04140
Autophagy - animal
tln04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139822436 (Dor)
04148 Efferocytosis
139822436 (Dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139822436 (Dor)
Membrane trafficking [BR:
tln04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139822436 (Dor)
Hops complex
139822436 (Dor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf-RING_Vps41
zf-C3H2C3
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-rbx1
COMP
Laminin_I
Motif
Other DBs
NCBI-GeneID:
139822436
NCBI-ProteinID:
XP_071650232
LinkDB
All DBs
Position
11:17832379..17840217
Genome browser
AA seq
1030 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVPAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILHL
AVSSNAIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKISGLFLDPLGHHLLITLVPR
HGDNPPPELFYLHRKTAKLKQAGKFKGHEITAVGWNFSNASETSSGPILLGTSKGLIFET
EIGLENDKLFNTSLEQYWRQVLIAYTLVGPSFHLSATNTLSPLHYSFLTKLPNYLPLYGS
KEAGGLVFDIGKNSKPPITGIEFHKIPNSDKYVIIVTTLMRIYQYIGAVGNPEEKPLLQQ
VFYRYLNAQETFNEVINSLPYSKMQFYYPFLGVLPKSFGWLTEAGILYAQVDAKPDAKYV
LVNQRMLTCPETSLMGSNVPQTTSVPLSFVLTEFHALLLYPDHVKGISLLNQELIFEDVY
NDAVGKLIGITKDPATRSIWAYSERAVFKYKVTKEDRNVWQVYVDKGEFELAKQYCRDNP
AHIDQVLVKQAEMLFKNKEYEKSALIYADTHSSFEEVSLKFLQEWQIEALKTFLRKKLDG
LKTQDKTQITMIVIWVTELFMNQMGALRSSNTSYLHDSQYTELQKQFDSFLTIPKVEECI
RRNRSTIYDLMASHGDKDNLICLTIMHCNYEEVIRQHLYKNNYLEALGVLKSQNNKDLFY
QFAGILLQELPRPTVAVLISQGSSLKPAKLLPALVSCNSDEKHAKEIIKYLEFCVYKQGS
QEQAIHNFLLSLYARYKQGEVMRYISSQGQDISMVHYDVHYALRLCQEVGLTEACVQLSA
LLGLWTTAVDLALTISVDLAKQIAAMPSDHDDELRKKLWLKIAEHVVREKDDIQQAMEFL
QHCDLVRIEDILPFFSDFVTIDHFKEAICNSLQEYNQHIQDLKEEMQEATKAAELIRKDI
QAFRTRCTFVHARDTCNTCDVQLLLRPFYVFPCGHKFHSDCLVAALTPMLSMDQRTKLAD
LQRQLTAISNRPEDTTSTISVSLSTRDQIKADIDELVASECLYCGELMIESIDKPFIEEE
DYERVMKEWT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgtttgaccagtacgagcaagcttctcagcgttccaagcaagtgccggca
ccgccaattcgtcctgatatcagcacagctggatttattcaaatgaagctgcaagatgac
gggcccatattcactaagcagaaggtcaactttctgccgtcagataaaattcttcactta
gctgtcagcagtaacgcaattgtgattgctatggctaacaacattttgctacgcatcgac
atgaaacaacctgacaaaactgaagaaatcgacatatccaagtatgcgttgagcatgaaa
atatccggcttgtttttggaccctttgggtcatcacctgctgataactttggtgccgaga
cacggggacaacccgccgccggaattattctacttgcataggaagacggcgaagctcaag
caagctggcaagttcaagggtcacgagatcaccgcggtgggctggaacttttctaatgct
tcggaaacgagctcgggtcccattctactaggcacttccaagggcctgattttcgaaacg
gagatcggcttggagaatgacaagctttttaacacgagtttggagcagtactggcgtcag
gtattaattgcttacacgctagtagggccatcatttcatttatctgctactaacaccctt
tcaccattacattattcatttttaacaaagcttccgaattatctgcctctttatggttca
aaagaggcgggaggattggtgtttgacattggaaagaatagcaagcctccgatcactgga
atagaatttcacaaaattcctaattcggataaatatgtgattatcgtgaccacccttatg
cgcatttaccagtacattggtgccgttggcaatcccgaagagaagcctctcttgcaacaa
gtattctatagatatctaaacgcgcaagagacctttaacgaagtaataaattctttgcca
tattcgaagatgcaattttactatccattcctaggcgtcttgccaaagtcatttggatgg
ctgacggaagctggtattctgtacgctcaggtggacgcgaaaccggacgcgaaatacgta
ctggtgaatcaacggatgttgacgtgcccggaaacaagtctcatgggtagtaacgttccg
caaaccacttcggtgccgttgtcttttgtactgacggaattccatgcgttgctgttgtat
ccggatcacgtgaagggcatatcgcttctaaatcaggaattgatattcgaagacgtttac
aatgacgcagtcggcaaattaattggcatcaccaaggatccggcaacgaggtcgatttgg
gcttatagtgagcgagctgttttcaagtacaaagtaacgaaggaagataggaacgtttgg
caggtatacgtcgataagggtgagtttgaactggctaagcagtattgcagagacaacccg
gcgcacatcgatcaagtgctcgtgaaacaggcggaaatgctcttcaagaataaagaatac
gagaagagcgcgctaatatacgctgatactcactcgtctttcgaggaggtctccttgaag
tttctgcaggagtggcaaattgaagccctgaaaacgtttctgcgcaagaaactcgacggt
ttgaagacgcaagacaagacgcagataacaatgattgtcatttgggtgacggaactgttt
atgaatcaaatgggagctctgcgcagcagcaacacgtcctaccttcacgattcgcagtac
acggaactgcagaaacagtttgacagctttctcaccattcccaaagtcgaggaatgtatc
aggagaaaccgtagcacgatatacgacttgatggccagtcatggtgataaagacaatcta
atatgtctgacaataatgcactgcaactacgaggaggtgattcgtcagcacttgtacaag
aataactacttggaggcactcggggtactcaagagtcaaaacaataaggacctcttctat
caattcgccgggatattattacaagagctgccacggcccacggtggccgttttgatctcg
caaggatcgtcactgaagccggcgaagcttctgccagctttggtctcgtgcaacagtgac
gagaaacacgcaaaagaaattattaaatatttggagttttgcgtgtataagcagggctcg
caggagcaagcaattcacaacttccttctatccttgtatgcgcgttacaagcagggcgaa
gtgatgcgatatataagctctcaaggtcaggatatcagcatggtgcactatgacgtgcat
tacgcgttgcgtttgtgtcaggaggtaggcttgacggaagcctgcgtgcaattgtcggct
ttgctcggtctctggaccaccgccgtggatctcgcgctcacgatcagcgtagatctcgct
aagcaaatcgccgctatgccatctgatcatgatgacgagttgaggaagaaactatggttg
aagatagcggagcacgtggtgcgagaaaaagacgacatacagcaagcaatggagtttttg
caacactgcgatttagttaggatagaagatattctgccctttttctctgatttcgtcacg
atcgatcatttcaaggaagctatttgcaattccctgcaggaatataaccagcatattcaa
gatcttaaggaagagatgcaggaagccacgaaagcagcagaactaatacggaaggacatt
caagctttcagaaccagatgcaccttcgtgcatgcgcgggacacgtgtaatacatgcgac
gtgcaactgttgctgagacccttctacgtatttccctgcggtcataaatttcacagtgac
tgtttagtagcggcgttaacgccgatgctgtctatggaccagaggacgaaactggcggat
cttcagcgacaactcacggctatctcgaaccggcccgaagacaccacttcgacgatctcc
gtgtcgttgtcgacgagggaccaaatcaaggccgatatcgacgagctggtcgcctcggaa
tgcctctactgcggagagcttatgatagaatcgatagacaagccatttattgaggaagag
gattacgaacgcgtgatgaaggaatggacgtga
DBGET
integrated database retrieval system
