Temnothorax longispinosus: 139822524
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Entry
139822524 CDS
T10889
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139822524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139822524
Spliceosome [BR:
tln03041
]
Complex B
Other components
Prp19-related factors
139822524
Complex C
139822524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
139822524
NCBI-ProteinID:
XP_071650424
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Position
11:complement(1832256..1834479)
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AA seq
425 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDSTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPPESMGNNFFNLQPTPGGMIPPMMIP
PPPVAPQFMFPPQMATAAAAAAAAVAAAAAATPIFPPGTTPIHYPSQDPSRMGASQGVGK
PWPEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcaaagactaccaatacgtataacagacaaaattgggaggatgcggagttc
ccgatactgtgtcagacgtgcttaggagacaatccgtacattcgtatgacaaaggagaga
tatggtaaggaatgcaagatatgtatgcggccgtttacggtgttcagatggtgtccggga
gcgaggatgagatttaagaagaccgaagtctgtcagacgtgcagtcgattgaagaacgtc
tgtcaaacgtgtctgttggatttggagtatggcttgccgattcaggttcgcgacgccgct
ttgaaaattaaggacgatttaccacgttcggatgtaaataaggagtactatgtacaaaac
atagacaacgaaattggaaagatcgactcgacgacgccggccggcgcggtcggcaagtcc
gccgcggctagcgatctgctgatgaagctggccaggaccagtccgtattacaagaggaac
aggccgcacatttgttcgttttgggttaagggcgagtgcaagagaggcgaggaatgtcct
tatcggcacgagaagccaacggatcccgacgacccgttggcagatcagaacattaaggat
cgctattacggagtcaacgatccggtggcggataaactgatgcgcagggcagcggccatg
cctaagctggacccaccggaggacaagtccatcacgacgttgtacatcggcaatctgggc
gacgtgctaacggagaaacagctgcgcgatcatttctatcagtacggcgaaatccgctcg
gtgacgatggtgccgcgtcagcagtgcgccttcatccaatacacgcagagaagcgctgcc
gaggcggcagccgaaaggacgttcaacaagctgatattaggtggaaggcggctcaccata
aagtggggccgttcgcagggaaggcagaccgtgtccgcggcggaagcgaccagggagatt
ctcgagcctgttccaggtttacctggcgccttaccgccaccgccgcccgaaagcatgggt
aacaacttcttcaatctgcaacccacccccggcggcatgataccgccgatgatgatccca
ccgccgccggtcgcccctcagtttatgttcccgccgcaaatggcaactgcggccgccgcc
gccgccgccgctgtcgccgccgccgcggccgcgacacccatcttccctccgggaacgacc
cccattcattatccgagccaagatccgtccaggatgggtgcgtcgcagggtgtgggcaaa
ccttggccggaggagtaa
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