Temnothorax longispinosus: 139822552
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Entry
139822552 CDS
T10889
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tln01009
]
139822552 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139822552 (Hdac6)
04131 Membrane trafficking [BR:
tln04131
]
139822552 (Hdac6)
03036 Chromosome and associated proteins [BR:
tln03036
]
139822552 (Hdac6)
Enzymes [BR:
tln01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139822552 (Hdac6)
Protein phosphatases and associated proteins [BR:
tln01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139822552 (Hdac6)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
139822552 (Hdac6)
Membrane trafficking [BR:
tln04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139822552 (Hdac6)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
139822552 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
139822552
NCBI-ProteinID:
XP_071650487
LinkDB
All DBs
Position
11:16636219..16645073
Genome browser
AA seq
1173 aa
AA seq
DB search
MTESTVNLDLFTAAKQLADSEIELIKVIENSSKCQRTATNMFTNAKKTKKSGKSKNVRPS
AALLAAKQEAAKRQLLSERSNSTFVPDIYQRAIDGYKTMRKETGLVFDRSMAEHSCLWDP
NYPECPARFTRVLQRCEELGLVQRCKFIEPRRATENELLSKHSQKQIDILKATDGSMDSE
NLELLSSKYDCVYIHPSTYSLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKSEY
CGYCFFNNVALAAEKALSSGLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGE
FWPNLRESDFHYVGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIVS
AGYDAALGCPEGEMLITPACYSHLLSLLLSLANGKVAVVLEGGYCLKSLAESAALTLRTL
LGDPCPVLQTLELPSLSIRDTILNAIYAHKPYWKCYQYQDTYSINSVAHNKEEIANRHVV
MVTYKGSEVKLEKYETRNCYPVQSKETLEAVEKQLNELIQLTNLRKTPHKVCIVYDEKMQ
RHCNISDSSHPEKPSRISSIYKNHEEHDLLQRCHLLQGRSATVEELSLVHSTDYIDDIKR
TSTVKLKELQKQASDYNSVFLHPETWSSACLSTGSLLQVVDAVLNGECQSGVAIVRPPGH
HAEIDIACGFCIFNNVAVAAMYAVQFHHVKRVLIVDWDVHHGNGTQSIFEEDPRILYISV
HRYDNGSFFPNSKLANYTNAGLNAGEGFNVNIPWNKKGMGDAEYIAAFQQVVMPIAYQFN
PELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLSSLANGRIILSLEGGYNINSISHAM
TMCTKALLGDPLPMLDPNLIPCTSAINSINNVLKTHKKFWSNLQYGMSLPKERLLPKFKT
IPNKLEEQRRNADKLKQTESKIALEVIESEKLDLNLAIDKNCLNLVTDEEISKLTCEVEN
IKIKNLHAMKSEAVETRRNPELKQSETKNLDAVSQSVQKCVNETNQPRGSQQGNSNIRED
RDDEGAASSQRETRSTTLSEYLSDNLQALTTGEMFAVVPLQDCPHLFTVNEVPSGGIDVN
SPCAECTSTAENWICLQCYTVHCARSVNQHAMQHAEEYEHPITLSFSDISVWCYGCESYI
DNPRLYAARNAAHQSKFNEALPWTYSESNSNTP
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatctacagtgaacctggatctgtttactgctgctaaacaattagcagacagc
gagatcgagctgataaaagtgattgagaattccagcaagtgtcaaagaactgctacaaac
atgttcacgaatgcgaagaaaacgaagaagtctgggaagtcaaaaaatgttcgtccgtca
gctgcattattggccgccaaacaagaagcagcgaaacgacagctgctatcggagagatcc
aacagcacctttgtaccagacatatatcaaagagcaattgatgggtataagacaatgcga
aaagagactggcctcgtatttgaccgaagcatggccgagcactcgtgcctctgggatcca
aattatcccgaatgcccggccagatttacccgagttttacagagatgcgaggagctgggc
ctggtacagaggtgtaaattcatcgaaccgagacgtgccacggagaacgagctcctaagt
aaacatagtcagaagcagattgatattttaaaggcaacggacggctctatggattctgag
aatttggagttgctgtcgtctaagtacgattgtgtctatatccacccgtctacgtatagc
ttgtctttactagctgttggctcaacaatcaatctagtagaaagtatctgtaaaggcgaa
atacaaaatggcatggctattatcaggccacctggtcatcatgcgatgaaatcagaatat
tgtggttattgctttttcaacaatgtagctctagcagcagagaaagctctgagttctggt
ttggcgaataggattctaattgtggattgggatgttcatcatgggcaagcgacgcaacaa
atgttttacaatgatccacgcgtagtttatttttcgatacatcgttatgaacatggtgaa
ttctggcccaacttgagggaatctgattttcattatgtcggggaggacctcggagagggt
tacaactttaatatacctttaaataaaaccggcatgactaatgccgattacattgcaatc
ttccagcaagttttattgccaatggcttacgagtttcaaccggatttgataatagtatca
gcaggttacgatgcggctctgggttgtccagagggtgaaatgctgataactccggcatgc
tattcgcatttattatcgttgttattaagtctggcaaatggaaaagtcgccgtggtttta
gagggtggttattgcctgaaatcattagcagaaagtgcagcattgactttaagaacttta
ttaggcgatccatgcccagttctgcaaacacttgagttaccatcattaagcatacgtgat
actatcctgaatgcgatctacgctcataaaccatactggaaatgttatcaataccaagac
acatatagcatcaatagtgtagcgcacaataaagaggagattgctaatcggcacgtagtt
atggttacgtacaaaggcagtgaagttaaactagaaaagtatgaaactcgaaattgttat
cctgtacaaagcaaagaaacattagaagctgtggagaaacaattgaatgaattgatacaa
ttaacaaatttgcgtaaaacacctcataaagtatgtatcgtctatgatgaaaagatgcag
aggcattgcaacatttctgacagttctcatccagagaaaccaagtcgcatctccagcatt
tataagaatcacgaagaacatgacttgttacaacgatgccatttattacaaggaaggagt
gcaacggtagaagaattatccttggtccattcgacggactatatagacgacattaaaagg
acatcgactgtaaagctcaaggaattacaaaagcaagcctcggattacaattccgttttt
cttcaccctgaaacatggtcgagcgcctgcttgtccaccggttctctcttgcaagtggtg
gacgcagttttaaatggggagtgtcaatccggagtggccattgtaaggccgcctggccac
catgctgaaatagacattgcgtgtggtttttgtatatttaataatgttgccgtggctgcg
atgtacgctgtacaatttcatcatgttaaaagggtcttaatagtagattgggacgtgcac
catggaaatgggacgcaatctatttttgaggaagatccaaggattctttacatctccgtt
catcgttatgataatggaagcttctttccaaattctaagctcgctaattatacaaacgct
ggcttaaacgcaggcgagggattcaacgtaaacataccgtggaacaaaaagggaatggga
gatgctgagtacatagcggctttccagcaagttgtgatgcccatcgcttatcaatttaat
ccagagttagtcctagtttcggccggatttgatgcttgcattggtgatacacttggaggt
tgtctcgtaagcccagaactctatggtcatttgacccattggctctcatccctagccaac
ggtcgtataatcctaagtctcgaaggaggttacaacatcaactctatctctcatgcgatg
accatgtgtaccaaggcccttctgggcgatcctttgccaatgctggaccctaatctcatt
ccttgcactagcgcgatcaattccatcaataatgtactgaagactcacaagaaattctgg
tccaatctgcaatatggaatgtccttaccgaaagagagactacttcctaaatttaagacg
atcccgaataaactcgaggagcaaagaagaaacgcagataaattgaaacaaactgaatcg
aagatcgctttagaggtaatcgagagcgagaaattggacttgaatctggcgatcgacaag
aactgcttgaatctagtgacggacgaggagatttcgaagctaacgtgcgaggtggagaat
attaagattaaaaatttgcacgcgatgaaaagcgaagcggtcgagacgagaaggaatccc
gagttgaagcagagcgaaacgaaaaatctggatgcagtttcgcaaagtgtacaaaaatgc
gtgaacgaaacgaaccaaccgagaggcagccagcaaggaaattctaacatacgcgaggat
cgcgatgacgaaggtgcggcatcgtcacaacgtgagacacgatccacaactctctcggag
tatctgtctgacaatcttcaggctctgacgacgggagagatgttcgcggtcgtgccccta
caggactgtccgcatctgtttacagttaacgaggttccttcaggtggaatcgatgtaaat
tcgccgtgtgccgaatgtaccagcaccgctgagaattggatttgcctgcagtgttacact
gtgcactgcgcccgcagtgttaatcaacacgcgatgcagcacgcggaggaatacgagcat
cccatcacgctcagcttcagcgatatctctgtctggtgctacggttgcgagtcttatatc
gataatcctcgattatatgcagcaaggaacgcggctcatcaaagcaagttcaatgaagcg
cttccttggacttatagcgaaagtaactcaaacacaccttaa
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integrated database retrieval system
