Temnothorax longispinosus: 139822733
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Entry
139822733 CDS
T10889
Symbol
Prp5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139822733 (Prp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139822733 (Prp5)
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139822733 (Prp5)
Spliceosome [BR:
tln03041
]
Complex A
U2 snRNP components
U2 related factors
139822733 (Prp5)
Complex B
139822733 (Prp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
139822733
NCBI-ProteinID:
XP_071650787
LinkDB
All DBs
Position
12:complement(11482450..11488416)
Genome browser
AA seq
1020 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSGEPEKKRRRSRSRERERERDKGRHRERRSRSRDRDRE
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKEEATEKDGKRSILANLQLPMKKWSL
EDDSDEETPVVQNNKEAKEEGVKEEIEEVKEEVKDEEEEIDPLDAFMAVVQEEVRKVNKF
DSKAPKSANNGTNSASQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHE
TAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGK
GCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLA
FLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR
IMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQK
FYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDF
KAGRTKLLVATSVAARGLDVKHLVLVINYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITS
EQERYAGDILRAYELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESEA
ALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIAKPSATSITVPGQPI
PSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAK
LNTKLNYQPREEDLVESDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSE
AGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEDYDTLRFRQRKF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagcagcgacaaggacaggcatcaccggcggagatcgcgatcgagatcaaga
tcgaggtcgggcgaacccgagaagaaacgacggcggtccagaagcagggagcgtgagagg
gagagagacaagggacgacatcgcgagcgaaggagtcgttcgcgagatagagacagagag
aggagcgacagaagggagcgttccgagagggacagggatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcgaaatcttcacgctctggcaaagaacgatccaac
aggtctcgctcacgcgatagaaaggataaagaaaagggggacaatgaagaattgcctttc
gatcacacaaagttagacaaggaggaggagcaaaagagactggaattggaaatgcaaaag
agaagggagaggatagaaagatggcgcgcagaaaggaagaagaaagaggaagcaaccgaa
aaagacggtaagagatctattttggcaaatcttcagctacccatgaaaaagtggtccctt
gaggatgatagtgacgaagagactcctgtggtacagaataacaaggaggcaaaagaagaa
ggtgtaaaggaagaaattgaggaagtaaaggaagaggtgaaagatgaagaggaggagatt
gatccactcgatgcttttatggcagtggttcaagaagaagtgagaaaagtgaataaattt
gacagtaaagctccgaaaagtgccaacaatggcactaattctgcatcacaaagcggtggc
gtggtcattgtgactggagtggctaagaaaaaagtacagaaacagaagggagaattgatt
gagcaaaatcaagatggattggaatattccagcgaagaggagggcgagaatcttcacgag
accgcggccggtatagcaaacaaacagaagcgagaattagctaaagttgatcatgctacg
acagattatcaaccatttcgaaagtccttttatgtcgaagtacctgagattgcaagaatg
acaccagaagaagtagaagcgtataaggaagaattagagggcattcgcgtgaaaggtaaa
ggttgcccaaagcctatcaagtcctgggcgcaatgtggcgtaaccaagaaggaattggaa
gtattgaagaaactcggttatgagaaaccgacccccattcaatgccaagcgattccggca
atcatgtctggtcgcgatctcataggtatagcgaaaactggtagcggaaaaacgctagct
tttcttttaccaatgtttcgtcacatactcgatcaaccaccgttggccgatggtgacgga
ccgatcgcattaatcatgacaccaactagggaattgtgtatgcaaatcggcagggattcg
aagaaatttacaaaatccctgggtctttcacacgtgtgtgtttacggcggaaccggtatt
tccgagcaaatagcagagcttaagagaggggctgaaatcatcgtatgcacaccgggaagg
atgatcgacatgcttgctgctaatagtggacgagttaccaatttacgtcgagtaacatat
gtagtgcttgatgaagccgacaggatgtttgatatgggttttgaaccgcaggtgatgcgt
attatggagaatgtgagaccagatagacagacggtgctgtttagcgcaacgtttccgcga
caaatggaggcgttagccaggagaatactcacgagaccggtcgaagtacaggtcggtgga
cgttctgtcgtctgcaaggatgtcgagcagcatgtggttgtcctcgaggaagaccaaaag
ttctacaagttacttgaaatcctcggacattatcaagacaaaggctccaccattatattc
gtagacaagcaagagaacgcagatacgttactcaaagatcttatgaaagcttcgtattcc
tgcatgtctcttcacggcggtatagaccaatgcgatcgagattcaaccatattggacttc
aaagcgggacgaacaaaattgctcgtggctacgtccgtcgctgctagaggcttggatgtc
aagcatttggtgttagtcattaattacgattgtccgaatcactatgaagattacgtgcac
agatgtggtcgaactggtcgggccggaaataaaggatacgcgtacacctttattacgtca
gagcaagaacgttacgccggcgatattttgcgtgcgtacgagttagcgggtgtacccgtt
ccagaacctttgcgccaattgtgggaaggttacaaagcccgtcaagccgcagatggaaag
aaggttcatactggaggtggtttcagtggcaaaggatttaagtttgacgaatcggaggct
gctttggcgaacgagaagaagaaattccagaaagcagccttgggactgcaagattctgac
gatgaggacatagaaaacgatatcgatcaacagatcgagagtatgctagcgcctaagcga
accgttcgtgaaatagctaagccaagcgcgaccagtattacagtgcccggtcaaccgata
cctagtgccactgataagcttgaattggccagaagattggcatcgaagataaacattgcg
aagaatctgggcgccgaggcgaaaggcgctactcaacaagcagcagaagctatactcaag
ggtgcaggacctacaaatcttattacggcaaagacggttgcggaacaattggcggcgaag
ctgaacactaaattgaattatcagccgcgcgaggaagatctcgtggaaagcgacgtggaa
acgggcgagcaaacattccgcaaatacgaagaggagctcgagatcaacgacttcccgcaa
caagcgagatggcgagttacgagtaaggaggctcttgctcagatctcagaatattctgag
gcgggtctgacagtgagaggaacttacatcgcgcctgggaagacgccaccggaaggcgaa
agaaaattatacctggcaatagaatcgacgagcgagttagcagtgagcaaggccaaagcg
gaagtgtctcgactcatcaaggaagactatgatacattacgctttaggcaaagaaagttt
tag
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integrated database retrieval system
