Temnothorax longispinosus: 139822995
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Entry
139822995 CDS
T10889
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
tln Temnothorax longispinosus
Pathway
tln04140
Autophagy - animal
tln04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139822995 (Vps11)
04148 Efferocytosis
139822995 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139822995 (Vps11)
Membrane trafficking [BR:
tln04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139822995 (Vps11)
Hops complex
139822995 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
Beta-prop_EML_2
zf-C3H2C3
zf-C3HC4
zf-RING-like
TPR_11
zf-RING_5
NPF
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
139822995
NCBI-ProteinID:
XP_071651347
LinkDB
All DBs
Position
12:complement(10507230..10513603)
Genome browser
AA seq
1092 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDAGKIAKAFGDAQVAAATSGNGNLVFGDNAGSVHLINRSYEI
TTFRAYEITLVLAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKPDKQGNPTCVRISRAIP
SYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDSNLSVTGLAIRA
TGKQTYLFVATQNCVFLYNITVKDKEFKSTLDTMGCARRCSVLAESMQDSHFMIGRNDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTISAKPNTIEPIPPGVDK
HIITVLDIQNKFIVFSAPMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKKN
LYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKFL
DSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEIA
IKVCRQASPEDALLLAQKHGKHEWYLRIQIEDKQEYKKALEYMATLEFEEAEANMKKYGN
ILIENVPNESTQFLKALCTNYKPSNKPLVDQEALNGYTEQRVDKASPEDFIHLFLNNSER
LVEFLEHLVKSDTKWSTLIYNTLVEHYLHVWSALDNDVAKLQYEQKIVRLLQNSEARYDK
DQILILCHQHNFRKGLLFLYEESKLYQEILRFHLCEGDSEQVLATCKRFGHQDPNLWVQA
LWSVAKNKDAPTKLLADILAYIAQERLLSPLMVVDAISTSLTCTLGDVRSYLCSVLRTEN
EQTQADTELTEKYRADTLKLREQIEAIKNNTIIFQGSRCSACHHQLELPSVHFMCQHSYH
QHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEDPFSLVADYFG
RGVFKKLTVITDTDKSLPTPTRSEEPKLNYGPGAEARLRLNEGKSSTSGKAEPRRAGYDV
PTLITEERFRNFVKPEVYSSSLEANISGTGSGLSTPRGNSAKASPVPIREARILNSTTPK
SSPIEKSFVSTKTPTVPSNPFETDYDESKNPFANDDDDDDANNPFKDDDDNDNDRAGNND
DDYNRNLNPFGR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctggagtggaggcgctttaatttcttcgacttgaaaaaggaagtcgacgca
gggaagatcgctaaagcgttcggggatgcgcaagtcgctgcagctaccagtggcaatggc
aatctcgtgttcggggacaatgcgggcagcgtacatttgataaaccggtcgtacgaaatc
accacctttcgggcttacgagatcacgctggtgttggcgcagcaagtccaacattccacc
ttcttgttcaccatcggtgaggacgagcctggatgcaatcctactataaaggtttggaac
ctggccaagcctgataaacaaggtaatccgacatgcgttcgaataagcagagccatacct
agctacagggcggtcccagcgacagctctatgtgtacatactagtcttacgttgatggct
attggatttggggatggatctatcatgttgtataggggtgacctgactcgagagcgaaag
aataagataaaagttttgaaggattccaatctgtctgttaccggcctcgcgatacgagcg
accggtaagcagacctatctgttcgtcgccacgcagaattgtgtgttcctgtataatatt
accgttaaggataaggaattcaagtcgactttggatactatgggttgcgcgcgaagatgt
agcgtgctcgccgagtctatgcaggacagtcactttatgatcggacgtaatgacgctatt
tattgttacacgccagacggtagaggcccatgctacgcggtagagggtcagaagataatg
ctagaatggttcaggacatatttggtgatagtagcgaaagaagcggcgaatgttccaaga
acaacaactatatccgccaaacccaacacaatagagccgatacctcctggcgtggataag
cacatcattaccgtgctcgatattcaaaacaagtttatcgtgttctccgcaccaatggtg
tctgtccaagcagtcttatccgagtggggtggattttttatacttagtggagataacaaa
ttgtatcatttagatgagaaagacttacagtcaaaattagcattacttttcaaaaagaat
ttgtacgatgtttctataagaatagctaaaaatcagcaatatgatgcagaaggtctcata
gacattttccgtcaatacggagatcatttatattctaagggggatcataatggcgctata
gagcaatatataaagactataggcaaattagaaccgtcttatgtgataagaaaattcttg
gattcccaacatattgataatttgacgacgtatttgcaagcgttgcataaaaatgggcag
gcaacagaggatcatactactttgttattaaattgttacactaagcttaaccataccgat
aagttaaaagagtttattatgacaaaagatcgtgaggttgattttgacgtggaaatagcg
ataaaagtttgccgccaagcatcgccggaggatgccctattactcgcacagaaacacggt
aaacacgaatggtatcttcgcatccaaatcgaagataagcaggaatacaaaaaggctttg
gaatacatggcaacgttagaattcgaagaggcagaagccaatatgaaaaaatatggaaat
atcttaatagaaaatgtgccaaatgaatctacacaatttttgaaagccttgtgcacgaac
tataagccttccaacaaacctcttgtagatcaggaagctttaaatggctatacagaacag
cgcgtcgataaagctagtccagaagattttattcatttatttctaaataattctgaacga
ctcgtagagtttttggagcatttagttaaatcagatacaaaatggagcacacttatttat
aatacattagtggaacattatttacatgtttggtcggcattagataacgatgtagctaaa
ctacaatatgaacagaaaattgtacgacttctgcagaattctgaggcccgttacgataaa
gatcagatattaatactttgtcatcaacataatttcagaaaaggattactatttctttac
gaagagagcaaactgtatcaagaaatattaagatttcacttatgcgagggagatagtgaa
caagttctcgccacttgcaaaagattcggtcaccaggaccctaatctgtgggtacaagct
ttgtggagcgtagctaaaaacaaggatgcaccaacgaaacttctcgccgatatattagct
tatatcgctcaagaaagactgttgtctcctttgatggtcgttgacgcaatttccacatca
ttgacctgcacgttgggagacgttagaagttatttgtgcagtgtattacgaacggagaac
gagcaaactcaagctgacacggaattaacagagaaatatagagccgatactcttaaatta
cgggaacaaatagaagcaataaagaataatacgataatctttcaaggatcacgatgtagc
gcgtgccatcatcagttggaattgccatccgtgcatttcatgtgtcaacattcgtatcac
caacattgctttcaaagcttttcggaaaatgaaaatgaatgcccggcctgcttgccaaac
aacaagaaattactggatattataagagcgcaagagcaatcgagggacctgcacgagact
ttccacagtcttctggatcgagcggaggatccattttccttagtggccgattattttggt
agaggtgtttttaagaaattaacagtaattactgatacagacaaatcgttacctacaccg
actagatcggaggaaccgaagttaaattacggcccaggtgcagaagcgagactcaggtta
aacgaagggaagagttctacctcaggaaaagcggagcctcgacgagccggatacgatgtt
ccaacgttaataacggaagagcgtttccgaaattttgtcaagccagaagtgtattcctca
tcgttggaggcgaatatatcgggaacgggaagcggtttgtcgacgccacgcggtaattcc
gccaaagcctcgccggtgccgatcagagaagcccgtatcttgaacagcactacaccaaag
tcatcgccaatcgaaaagtcctttgtttcaacgaaaacccccactgtgccatcgaatccc
tttgagactgactatgacgaatccaaaaatcccttcgccaacgacgacgacgacgacgat
gcgaataatccttttaaagatgacgatgataacgataatgatcgggccggcaacaatgac
gacgattacaacagaaatctaaatccattcggtaggtaa
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