Temnothorax longispinosus: 139823101
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Entry
139823101 CDS
T10889
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tln Temnothorax longispinosus
Pathway
tln03440
Homologous recombination
tln03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139823101 (Top3alpha)
03460 Fanconi anemia pathway
139823101 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tln03032
]
139823101 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
tln03400
]
139823101 (Top3alpha)
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139823101 (Top3alpha)
DNA replication proteins [BR:
tln03032
]
Eukaryotic type
DNA Topoisomerases
139823101 (Top3alpha)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139823101 (Top3alpha)
FA (Fanconi anemia) pathway
139823101 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
HVO_2753_ZBP
zf-LITAF-like
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
139823101
NCBI-ProteinID:
XP_071651499
LinkDB
All DBs
Position
12:7046176..7051010
Genome browser
AA seq
1101 aa
AA seq
DB search
MALSKLYNIALDCTIYYGLRGINNLSSKKSANSFYPLRRYCSQRVMKVLNVAEKPNAAKT
IAGYLSHGTSRKREGFSVYNKIFEFNVQLWGQNCQMMMTSVTGHLLGYEFTGAYSKWHSC
HPLSLFDAPVSKQCLDENYVKIKRTLEREIRFCDTLIIWTDCDREGENIGFEIIQVCQAV
KRNIRVHRAKFSEITKQSVERALQTLGEPDKAMSDAVDVRSELDLRIGAAFTRFQTLRLQ
KVFPNTLGDMLISYGSCQFPTLGFVVERFLAISRFKSEPYWKLRVLDEREDMSVEFRWAR
VRLFEKMPCQIFLDMCLEQPEATVEKVTCKPKSKWRPLPLDTVELEKQGSRKLRINAKET
MRIAERLYTQGLISYPRTETNIFPKELNLAPLVEQQVNHREWGDFARNLLDSGITPRQGK
KSDEAHPPIHPTKYADNLQGNEAKVYEFVVRHFLACLSKNAEGRETTVEINIAGERFTAN
GLEIIAKNYLDVYVYEKWNSKQIHPYEQRQVFRPTSIDMVEEKTSAPNLLTEAELIALMD
KHGIGTDATHAEHIDTIKSRQYVGLTDTQHFMPGKLGIGLVMGYDNMGFQMSKPHLRAEL
EKDLQLICQRQKDPNEVLQNQVNKYREVFKVAIERAKLIDDSLAHYLDERPIQAEQALVT
QESDVAVFKCPKCGSNMVLRERRQGRGKYISCMGTCTNVIWFPETVEDVEVLNETCNQCT
ENIRKLKFKLVRTMVSLYGTSYTTCIGCDTEFREMSDIREDCIKQTGERRANYTGHNNTR
DTGYSSISTSSTAQSRSIQQQSVSSNRGSTVRSNNNVGLIGISGTSESRTQNQHSNVSQL
NRSNRPNTDRSTTSNNRENHNSWGINSGDFNSSLNRSNPYAARDTPNTNRITNTWGNIDN
SSEIMCQCHELAIQLTVRKEGPNKGRLFYKCAKPQGRGCNFFLWATPNPEPEDNAANEHS
SWVSNLNRNNDGAGNVSRVGTSNNDWGSSSTNDVICQCDQPARKLTVHKDGPNKGRQFYG
CPKGMNSTCKFFKWADEDDAGSHENTDWSNSTARGRGNTARSRMPQKGGAPKRPRLTGGK
RKCGNCGIEGHTRNKCPSSGN
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccctctctaaattatacaatatcgcattggattgtacgatatattacggtctgagg
ggcatcaacaatttgtccagcaagaagtctgcgaattctttctacccgttaaggcgatat
tgttcacagcgcgttatgaaggtcctcaatgttgccgagaagccgaacgcggctaaaact
atcgctggctatttgtcgcacggtaccagcagaaagagggaaggtttttccgtgtacaac
aagatcttcgaatttaatgtacaactatggggtcaaaactgccaaatgatgatgacgtcc
gtgaccggccacttattaggctacgaattcaccggagcctatagcaagtggcacagctgt
catccgttaagcttgtttgatgccccggtatctaagcagtgcttagatgaaaattacgta
aagattaagaggaccttagagcgagaaatacgattctgtgacacattgattatttggaca
gattgtgacagagagggggagaacataggctttgagattattcaagtctgccaagcagtc
aagcgtaatatccgtgtacatagagcaaaattctcggaaattacgaaacagtccgtcgaa
agagccctgcaaactttgggagaaccagataaagcaatgagcgatgccgtagatgtaaga
agcgaattagatttacgaattggtgctgcgttcacgagatttcagaccttaaggttgcaa
aaagtattccccaatactcttggagatatgctcatcagttacggaagctgccagtttcca
acacttgggtttgtagtcgagaggtttctggccatcagtcggttcaaatccgagccatac
tggaagctaagagtgctcgacgaacgcgaagatatgtctgtagaattcagatgggccagg
gtaagattattcgagaaaatgccttgccagatctttctggacatgtgcctggaacagccg
gaagctacggtagagaaggtaacgtgcaaaccaaagagcaaatggagaccgctacccctg
gatactgttgaattagagaaacaaggctctcgtaagttgcgcataaacgcgaaggagacg
atgagaatcgcggagagattgtacacccaaggtctcatcagttacccacggacggaaaca
aatatattcccgaaggaattgaatctggcacctttggtagagcaacaggtaaaccatcgg
gaatggggtgactttgcgcgaaatttactggactccggaataactcccaggcaaggaaag
aaaagcgatgaagcgcatcctcctattcatcctacaaaatatgccgacaatttgcaagga
aacgaagcgaaggtctacgaatttgtggttcgacattttctggcttgtctgtcgaagaac
gcggagggccgggaaacaacggtggaaatcaatatagcgggagaaagattcacggctaat
ggtctcgaaatcatagcgaagaattatcttgacgtgtatgtatacgaaaaatggaacagc
aagcaaattcacccttatgagcagagacaagttttccgaccgaccagcatcgatatggtg
gaagagaagacttcggcgccgaatttgttaaccgaggccgagttgatcgcactgatggac
aagcacggtatcggtacggacgctactcacgctgaacatatcgacaccatcaaatccagg
caatatgtgggtttaacggacactcaacatttcatgccgggcaaattggggattggtctg
gtcatgggttacgacaatatgggtttccaaatgtccaagccgcatttgcgcgcggagtta
gaaaaagatttacagctgatatgccagcgtcaaaaagacccgaatgaagtgttacaaaat
caagttaataaatatcgcgaagtattcaaagtggcgatagaacgtgctaaactgatagac
gactctttagcacactatctcgacgagagacctatccaagctgagcaagcactggttact
caagagagtgacgtcgctgtattcaagtgtccaaaatgcggctctaacatggttctaaga
gagagacgacaaggcagaggaaaatatatcagttgcatgggaacgtgcaccaacgtgatc
tggttcccagaaactgtagaagatgtggaggttttgaacgaaacatgcaatcagtgtaca
gaaaatatacgcaaattaaaattcaaattagtcaggactatggtatccttgtacggtacc
tcttacacaacttgtataggctgtgataccgaattcagagaaatgtcggacatcagggaa
gattgcattaaacaaactggagagagaagagcgaattatactggtcacaataatacgagg
gatacaggatacagctccatttctacctcaagtacagcccaatcgcgaagtattcaacaa
cagtccgtttctagtaatagaggaagtactgttcgaagtaacaacaatgttggcttgatc
ggaatttctggcacatctgaaagccgtacacaaaaccaacattctaatgtttctcagctg
aatagatcaaataggccgaataccgatagaagtacaacgtcgaacaatagagaaaaccat
aattcttggggaattaattcgggtgatttcaatagttcgttgaacagatcaaatccatat
gcggccagagatactcccaacacgaatcgtataaccaatacgtggggtaacattgacaat
agttctgagattatgtgtcaatgtcacgagcttgcgatccagttaacagttagaaaagag
ggaccaaataaaggacgtttattttacaaatgcgctaaaccgcaaggtagaggttgcaat
tttttcttgtgggcaaccccgaaccccgaacctgaagataacgcagcgaacgagcattca
agttgggtatctaatctgaacagaaacaatgatggtgctggcaacgtctctcgcgttggc
acttctaataacgattggggaagctcatccacgaacgatgttatatgccagtgtgatcag
cccgctcgaaagctgacggttcataaggacggccccaataaaggacggcagttttacgga
tgtcccaaaggtatgaactccacctgtaagttcttcaagtgggcagacgaggatgacgcc
ggtagtcacgagaacacggactggagcaattccactgcgagaggaagagggaatacagca
cgaagcagaatgcctcaaaaaggcggtgcccccaaaaggcctagacttaccgggggcaag
agaaagtgcggaaattgcggaatagaaggtcatacgaggaacaaatgtccatcaagtggg
aactga
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