Temnothorax longispinosus: 139823160
Help
Entry
139823160 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tln Temnothorax longispinosus
Brite
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139823160
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
U-box type E3
139823160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139823160
NCBI-ProteinID:
XP_071651624
LinkDB
All DBs
Position
12:13232687..13248547
Genome browser
AA seq
1976 aa
AA seq
DB search
MSVHYKFKSTLDYDTVSFDGLHISVADLKKAIFHQKRIGKNTDFDLQITNAQTKEDYTDD
NALIAKNTSLIVARVPLTVQQKRSWDRNETPPFSNVKDETNLGRAVDLTRLDGSEEDKIR
AMMTQSTQDYDPSNYMKIRGANQTGDVPANYRCYKCHQPGHWIKNCPLGTNQEPIEIKKS
TGIPRSFMVPVEGPLVPGAMMTPTGHYAVPAIDHQAYKEGKKERPPFSQDPEPVVEKPEI
PEDLLCNICKDLLTDAVMIPCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNR
FLRNAVMNFKNETGYAKRQTYRPPAQNAGQITVPTDQPKTETQQVAGHVSSQAKTVQSSV
APDAPSQEPVDPLQSTDPESASQHFPTNISGSQPQSSTTLPESTSESHLQSDSVTKLTTD
EETEVPPPPGTEPLLPIPALVSSPERERERSDPSSRDKKERDNEYSEERQSRERRRSFSR
DGHRDRSGERGRRIENLRPLNRNRNRSLSPRHSQHGDYPSSSVVLPHLMNPPPSKSYQGH
LADDGHYPPTMHYDSGIHRSNEDRAGTPTVDEPHLHVPSSGNQPPLLPFPPGEERIPPPN
YNQPPPNVPPHNPPLLPDPYMSHRIPIYPHQQGSHYGPPRYDRPYQQQGYRPSQPPRNYN
GPPRPMRGLHHMGYRNLQPPPPGLGRNIHNGNPPGIIDDPLEAFERMLREKDERDRRLGK
HRRRSRTRSRSRSYSRSRSRSFGRRSPFASRISRSRSPPSKRRSSRSPLPLRPRSRTPKR
RSRSGSFSISRSRSYSRSQSPRLSPSRDRDRERDRDRERDRERDRDRDRERDRDRDRDRD
RDRDRDRDRERDRDRDLLPRYRSPVRSPPRFQRERDRERDRPRSREPRDGYNTYYGDSPA
HDYPFRDRERDLPPRERPLPRYPIGRNQPSQHNIPPLMPHLVTGGHPPPPPLMSLGPSPT
DRKDYYDSYNRYSGPPPPQRFSSPLRDSSSHKRFDDVAPPGTEGYYDLSPPGVEHSERPS
RDDRERQRSLRDQEDREHSSKDRDNDERDRLRDDRGREREDRMRERDDRDRRIVNRDRED
RDRQVPPREHEDRIREKDERDRREKDKERDDRHIRDRRDDDNRHVEKKDYDKDRYRDDRD
RHRQDDKNRLREKERREREYEPEKDRDRHERYERRSVERKKSRKSLSPYSQKSRGDPKDL
SPERSTKKKEKDHEEKVEEKKKEKKIKEKKKKKDNDEKEKKKKKKKDKKSNQKETAKDDP
TIKTMETDDLLVESKTSNDTLSSPLNKTDSAKACNEEANIQNRIECISNQVSIVPIKEEF
EDKSLAMNPEPPEFNEPSPGSGRLDRAEFGTNPPNPNFKPIPELKSDMKPIDSLYGGLDD
TEINTVITEKYSLLSEHSQTETKEAITVLATEKSPKKDEFLAPLPELSKWERDDTIEKAE
DDDDDDDEASGSPTEKTQREDEPKSIKMVTSEVLKRAENAIFQKAINAIRPIEIKKISES
RKILYQNPEPKVLETVEPANREPRKSVNVTINVGRNERNVEITEPAKKAKLDRTKFKPVP
ETAYSPTRLSAKERLGEKIEDGKERKVSPIKGFMERRDGKNENQSRSRSPRREKRLSSPL
LESRRVESSSLGLTTTSGERKVFLEERKRDKDRGDRSKERSDFRGDRHGSELKPERESRV
DCRTDFRSNRNDVKGERVDKDRDKDRDREHRGRTPPSACAFKKTEMSKVSLLKSKDDEEE
KKRDKKSREEKKRKKEHRSRSKSKEHKKRKEKKHKKDKDKNQEKKQKHKEAAISKDKSDG
GNETKISYENVEPPLAESSKKQRKNPRLVSDRKRSILDEASFEPDYSASDSESDGEEGNK
PSPAKKLKLDETELNKEMEIKSLKKRSKSSSSEDTSSSSDTTSSDSDSSDESHKKKRKKH
KKHKKKKSAKKDSSSDSDTYSDSSDSSSDEEKHKKKSKKSKSRSKQSKKKKKSKHK
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcactacaaatttaaatctactttggactatgatactgtgtcgtttgacgga
ctgcatatttcggtggcagatttgaaaaaggccatatttcatcaaaaacgtatcggcaaa
aatacagactttgacctgcaaattacaaatgcgcaaacgaaggaagattatacggacgat
aacgcgctaattgcaaagaataccagtcttattgtcgccagagttccattaacggtacaa
cagaaacgttcttgggatcgaaatgaaactcctccgtttagtaatgtgaaggatgaaact
aatttaggcagagccgtagatctcacgagattagatggctcagaggaggataaaatccgt
gccatgatgacgcaatcgactcaagactacgatccatcaaattatatgaaaattcgtgga
gccaatcagactggggatgtgcctgcaaattaccgttgttacaaatgccaccagcctgga
cattggataaaaaactgtccactgggcacgaatcaagagccaattgaaattaagaaaagc
actggtattcccagaagttttatggtaccagttgaaggacctttggtgcctggtgctatg
atgacacctacgggacactatgctgttcctgctattgatcatcaagcttacaaggaaggt
aagaaggaacgaccaccattttcgcaagatccagaacctgtggtagagaagcccgagata
ccagaggatttgttatgcaatatctgcaaagatcttttaacggatgcagtgatgattcca
tgttgcggaaattccttttgtgacgaatgtattcgtacatttttgttagaatccgaagaa
cacgaatgtccagattgtaatgagaaagatgtatcaccggaaacacttataccaaatcga
tttctacgtaatgcagtaatgaattttaagaatgaaactggttacgccaaaagacaaacg
tatcggcctcccgctcaaaatgctggacaaatcactgtaccaaccgatcagccaaaaact
gaaacgcagcaagttgcgggtcacgtatcttctcaagctaaaactgtacagtcatccgtt
gctcctgacgcaccgtcgcaagaacctgtagatccactgcaatccactgatcctgaatct
gcttcgcaacactttccaaccaacatctctggttcgcagccacagtcatcaaccactctg
cctgaatccacttcagagtcacacttgcaaagtgactcggtaacaaaactaacaactgac
gaggaaactgaggtgcctcctcctccaggaacagagccgctactcccgatccccgccctc
gtgagttcgccagagagagaacgcgagcgaagcgatccctctagccgcgataagaaggaa
cgagataatgaatattcggaagaacgtcaatcgagagaacgtcgacgaagtttcagcagg
gatggacatcgtgacagaagtggagagcgtggtcgtaggattgaaaatttacggccgtta
aatcgcaaccgaaatcgatcgttatcgcccaggcactcccagcacggcgactatccatcc
tcgagcgtggtgttacctcacttaatgaacccacctccttccaaaagctatcagggacat
ttagcggacgatggacattatccgcctactatgcattatgacagtggaatacatagatct
aacgaagaccgtgcgggcactccaacggtcgatgagccgcatttgcacgtcccttcatcc
ggcaatcaaccaccgttattgccttttccaccgggcgaagagcgtattccgccgccgaat
tacaatcagccaccgccaaatgtacctccgcataatcctccacttttgccggatccttat
atgagtcatcgaataccgatatatccacatcagcagggatcgcattacggaccgccgagg
tacgatagaccttatcagcagcagggatatcgaccgtctcagccaccccgaaattataac
gggccaccgagaccaatgagaggattgcatcacatggggtatagaaatttgcaaccaccg
ccacctggactaggtagaaatatacacaatgggaatccacctggaattattgacgatcca
ttggaagcattcgaacgaatgctcagagagaaggatgagagagatcgacgtttagggaag
cacagaagaagaagcagaacgcgatctcgatcacgtagttacagtcgatctagatcgcgc
tcctttggccgcagatcaccttttgcatctcgcatcagtcgatctcgtagtccgccgtcg
aagcggagatcatcgaggtcaccattaccgctccgacctcgtagtcgcaccccaaaacgt
agatcaagaagcggcagcttctctatcagcagatctagatcgtattcccgcagtcagtca
ccaagactgtctccgtcgagagatagagatagggaaagagacagagatcgagagagggac
agagaaagagatcgcgaccgtgaccgggagcgcgatcgtgatcgcgaccgcgaccgcgac
cgtgaccgcgatcgcgacagagaccgcgagcgggatcgagatcgcgacttactgcccaga
tatcgatcgccagtcagatcacctccaagatttcaaagagagagggatcgcgagagagac
aggccgcgctcacgtgagcctcgagatggatacaacacttattacggcgattcgccggct
catgattatccattccgagatcgtgagcgcgatttaccgcctagggagagaccactgccg
agatatcctataggaagaaatcagccatcccaacacaatataccaccgttgatgccgcat
ctagtcactggaggtcacccaccaccaccaccgcttatgtcattgggaccttcgcctacg
gacaggaaagactattatgattcctacaacagatattccggacctccgccgccgcagcgt
tttagcagtcctctgagggattcttcgtcacataagcgatttgacgacgtagcaccgcct
ggtactgagggctattacgatctctcgccaccgggtgtcgaacattccgagagaccgtcg
agggacgatcgtgaaaggcaacgctccctgagggatcaggaagatagggagcattcgtcg
aaggatcgcgataacgacgaacgtgatagattgagagacgataggggtcgcgaacgtgag
gatcgtatgcgcgagagggacgacagagatcgcagaatcgtaaacagagatcgcgaggat
cgcgacaggcaggttccgcctagagaacatgaggataggatacgagagaaagacgagcgc
gacagaagagaaaaggataaggaacgagacgatagacacattcgcgatcgtcgagatgat
gataataggcatgtcgagaagaaagattatgacaaagaccgttatagagatgatcgagat
cgccataggcaggacgacaagaaccggctgcgagagaaggagagacgagaacgcgaatac
gagcccgagaaagacagagatcgtcacgaacgatacgagagacgttcggtagagcggaaa
aagagcaggaagagcctaagtccgtactcgcaaaagtccaggggcgaccctaaagatttg
tcgccagaacgaagtacgaagaagaaggaaaaggaccacgaggaaaaggtggaggagaag
aagaaagagaagaaaataaaggagaagaagaagaagaaggataatgatgagaaggagaag
aagaagaagaagaagaaggacaagaaatcgaatcagaaagaaacagccaaggacgatccg
acgatcaagacgatggagacggacgacctgctggtcgagagtaaaacaagtaatgatact
ttgtcttcgccgctcaacaagaccgactccgcgaaggcgtgcaacgaggaggctaacata
cagaataggatcgaatgtatctccaaccaagtatctatcgtgccgatcaaagaggaattc
gaggataagtctctggcgatgaatccggaaccgccggaattcaacgaacccagccctggc
agtggtcggctagatcgtgcagaattcggcacgaatccaccgaatccaaactttaaaccg
atcccggaactcaagtcggatatgaaaccgatcgacagcctgtacggaggattggacgac
acggagattaacactgtgatcacggagaagtattctctactctcggaacactcgcagacc
gagactaaggaagctatcaccgtgctagcgacggagaaatcaccaaagaaggatgagttt
ctggcaccactacccgagttgtccaagtgggaaagggacgatacgatcgaaaaagccgag
gacgacgacgacgacgacgacgaggcgagcggatcgccgacggagaagacacagagagag
gacgagccgaaatcgatcaagatggtcacgtcggaggtgctgaagcgtgcggagaacgct
atattccaaaaggccattaatgcgatccgaccgatcgagatcaagaagatcagcgaaagc
agaaagatattgtatcagaatcctgagcctaaggtgctggagacggtggagcccgccaat
cgagaaccgcgaaagagcgtcaacgtgacgatcaacgttggtagaaacgagaggaatgtc
gagatcaccgaaccggcgaagaaagccaagctcgatcgtaccaagttcaaacccgtgcca
gagacagcctactcgccgaccaggctgtccgccaaggagagactcggtgagaagattgag
gacggcaaggagagaaaggtcagtcctataaagggattcatggagaggcgtgacggcaag
aacgagaatcagtcgagaagtcgatcgcccaggagggaaaagaggctctcctctccgctc
ttggagtcgcgacgcgtagagtcctcttcattgggtttaactacaacgagcggcgaacga
aaagttttcttggaagagagaaaacgggacaaggatagaggcgatcggtcgaaggagagg
tcggatttccgaggcgacagacacggcagcgagttgaaacccgagagggagagtagagtc
gattgtagaacggactttcgttccaatagaaacgacgtgaaaggagaacgcgtggataag
gatcgcgacaaagaccgagaccgcgagcacagaggtaggacacccccctcggcttgcgcg
tttaagaaaacggaaatgtcaaaggtcagcttgttgaaatcgaaagatgacgaggaagag
aagaagcgtgacaagaaatcgcgggaggaaaagaagagaaagaaggagcaccgcagcagg
agtaaatccaaggagcataagaagcgcaaagagaagaagcacaagaaggataaggataaa
aatcaggagaagaagcaaaagcacaaggaggccgcgatctcgaaggacaagtcggatggt
ggtaacgagaccaagatcagttacgagaacgttgagccgcctctggcagagtcgtcgaag
aaacaaaggaagaatccgagactggtgtctgatcgcaagcgcagtatactcgacgaggcg
agcttcgaacccgattattcagcttcggactcggaatcggatggcgaggaaggtaataaa
ccgtcacccgcgaagaagctgaagcttgacgaaacggaattgaacaaggagatggagatt
aagtccctgaagaaacgatcaaagtccagtagcagcgaggacacgtccagcagttccgac
acaacgagctccgactcggatagcagcgacgagtcgcataagaagaaaagaaagaagcat
aagaagcacaagaagaagaaatctgccaagaaggatagcagttcggactcggacacttac
tctgattcgtctgacagcagcagcgatgaagagaaacataaaaagaagtcgaaaaaatca
aagagcagaagcaagcagtcgaagaagaagaagaaatccaagcataaatga
DBGET
integrated database retrieval system
