KEGG   Temnothorax longispinosus: 139823347
Entry
139823347         CDS       T10889                                 
Symbol
Atg16
Name
(RefSeq) autophagy-related protein 16-1
  KO
K17890  autophagy-related protein 16-1
Organism
tln  Temnothorax longispinosus
Pathway
tln04136  Autophagy - other
tln04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tln00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139823347 (Atg16)
   04136 Autophagy - other
    139823347 (Atg16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tln04131]
    139823347 (Atg16)
   03029 Mitochondrial biogenesis [BR:tln03029]
    139823347 (Atg16)
Membrane trafficking [BR:tln04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    139823347 (Atg16)
 Others
  Specific organelles associated proteins
   Auto phagosome
    139823347 (Atg16)
Mitochondrial biogenesis [BR:tln03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    139823347 (Atg16)
SSDB
Motif
Pfam: WD40 WD40_Prp19 ATG16 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th NBCH_WD40 eIF2A Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_Vps41 RMC1_N WD40_RFWD3 PEP5_VPS11_N Cytochrom_D1 Ge1_WD40 UCH DUF4407 Beta-prop_NWD2_C Cluap1 EXOC6_Sec15_N
Other DBs
NCBI-GeneID: 139823347
NCBI-ProteinID: XP_071651900
LinkDB
Position
12:10814215..11216332
AA seq 568 aa
MTSNEAGASLGVAREDVNWRKDIISQLRERNRSQTNCFADLISLHNRLFENANTLRNTNM
QLTIANETLRREVANGSIGMGGNPDLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQE
MTKDLQAKEASLAESSEANTNLRLEITKCLGREKELEGINQMLKDEHQALQLAFASLEEK
LRKTQEENRQLIERLIKYKARDAEKMNEENDNFLSFTSPTAFLMHTLSKFGKRQAKMQKE
LEDAARDTRPVSPDRLSLKEVAGLPTAVPTKVSVTFSAHEGEVYAVKWSPTDRILATGGA
DRKVKLWNITKGTSESKGILVGSNAGVMSVDFDSTGTLILGASNDYASRVWTVSDLRLKH
TLTGHCAKVMAAKFLGEPSKVVTGSYDRTLKIWDLRSKACIETKFAGSSCNDLVTSDGAG
STIISGHFDQRIRFWDTRAESSSNDILLEGKVTSLDLSRDANYLLSCVRDDTVKLIDLRM
KKIVGSFSADGFKVGFDWTRAAFSPDGQYIAVGSADGSVFIWSIATNMIETILKEHTAAV
TAVSWHPHGTYLASVDRAKTVIIWGDHV
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgacctcgaacgaagcaggcgcatcgctcggcgtcgcccgggaagacgtcaactggcgg
aaggatataatttcgcagttacgcgagaggaatagatcgcaaaccaattgtttcgcagat
ctcattagcctacataataggttatttgaaaatgcaaatacattgcgaaatacaaatatg
caattgacaattgcaaatgaaactctccgtcgcgaagtggctaatggtagtattggcatg
ggtggcaatcccgatcttgaagctagattattgaagcaagcggaggaattagcaatgcta
cataagaggaaaggagaacatacgcaacaaatagtagatcttaataacaaattgcaggaa
atgacaaaagaccttcaagcaaaggaagctagtcttgcagaaagttcagaagctaatact
aacttacgtttagaaataactaaatgccttggtagagagaaagaattagaagggattaat
cagatgctcaaggatgaacaccaagccttacaacttgcttttgcatctttagaagaaaag
cttagaaaaacacaagaagaaaatcgacagctgattgaacgcttaataaaatataaagcc
agagatgctgaaaagatgaatgaagaaaatgataactttttaagttttacgagtccaaca
gcctttttgatgcataccttgtcaaaatttgggaagagacaagcaaagatgcaaaaggaa
ttggaagatgcagcacgagatacgcgacctgttagtcctgatcgtttaagcttaaaagaa
gttgccggtcttccgacagcagtgccaacgaaagtatccgtaacgtttagtgcccatgag
ggagaagtatacgctgttaaatggtcgcctactgatagaatattggctactggcggtgct
gacaggaaggtgaagctttggaacattactaaaggtacgtcggaaagtaagggcatcctc
gttggcagcaacgccggtgtgatgtcggtggacttcgattcgacaggtacccttattctt
ggagcatccaacgattatgcgagccgcgtctggaccgtcagtgatcttcgcttaaagcat
acactcacgggccactgcgcgaaggtgatggcggcgaagtttctcggcgagccgtcgaaa
gtagttacgggaagttatgatcggaccttaaaaatctgggatctgcgcagcaaagcatgt
atagaaacgaaattcgctggttcaagttgcaacgatctcgtaacttccgacggagctggc
tctacgataattagtggtcattttgatcaaaggatcaggttttgggataccagagccgaa
tccagctcaaatgacattctattggaagggaaagtgacatctttagatttatcccgtgac
gcaaattaccttttgagttgcgtgagggatgacacggtgaaactgattgatttacgaatg
aagaagattgtcggatcgttcagcgctgacggtttcaaagtgggattcgattggacgaga
gccgctttcagtcctgacgggcagtacatagcggtcggttccgcggacggttccgttttc
atctggtctatagcgacgaatatgatcgaaactatactgaaagagcacacggcagcggta
acggccgtgtcttggcatccgcacggcacgtatctggcgtccgtcgatcgcgccaagacg
gtgataatttggggcgaccacgtttga

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