Temnothorax longispinosus: 139823347
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Entry
139823347 CDS
T10889
Symbol
Atg16
Name
(RefSeq) autophagy-related protein 16-1
KO
K17890
autophagy-related protein 16-1
Organism
tln Temnothorax longispinosus
Pathway
tln04136
Autophagy - other
tln04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139823347 (Atg16)
04136 Autophagy - other
139823347 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139823347 (Atg16)
03029 Mitochondrial biogenesis [BR:
tln03029
]
139823347 (Atg16)
Membrane trafficking [BR:
tln04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
139823347 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
139823347 (Atg16)
Mitochondrial biogenesis [BR:
tln03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139823347 (Atg16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
ATG16
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_Vps41
RMC1_N
WD40_RFWD3
PEP5_VPS11_N
Cytochrom_D1
Ge1_WD40
UCH
DUF4407
Beta-prop_NWD2_C
Cluap1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
139823347
NCBI-ProteinID:
XP_071651900
LinkDB
All DBs
Position
12:10814215..11216332
Genome browser
AA seq
568 aa
AA seq
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MTSNEAGASLGVAREDVNWRKDIISQLRERNRSQTNCFADLISLHNRLFENANTLRNTNM
QLTIANETLRREVANGSIGMGGNPDLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQE
MTKDLQAKEASLAESSEANTNLRLEITKCLGREKELEGINQMLKDEHQALQLAFASLEEK
LRKTQEENRQLIERLIKYKARDAEKMNEENDNFLSFTSPTAFLMHTLSKFGKRQAKMQKE
LEDAARDTRPVSPDRLSLKEVAGLPTAVPTKVSVTFSAHEGEVYAVKWSPTDRILATGGA
DRKVKLWNITKGTSESKGILVGSNAGVMSVDFDSTGTLILGASNDYASRVWTVSDLRLKH
TLTGHCAKVMAAKFLGEPSKVVTGSYDRTLKIWDLRSKACIETKFAGSSCNDLVTSDGAG
STIISGHFDQRIRFWDTRAESSSNDILLEGKVTSLDLSRDANYLLSCVRDDTVKLIDLRM
KKIVGSFSADGFKVGFDWTRAAFSPDGQYIAVGSADGSVFIWSIATNMIETILKEHTAAV
TAVSWHPHGTYLASVDRAKTVIIWGDHV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaacgaagcaggcgcatcgctcggcgtcgcccgggaagacgtcaactggcgg
aaggatataatttcgcagttacgcgagaggaatagatcgcaaaccaattgtttcgcagat
ctcattagcctacataataggttatttgaaaatgcaaatacattgcgaaatacaaatatg
caattgacaattgcaaatgaaactctccgtcgcgaagtggctaatggtagtattggcatg
ggtggcaatcccgatcttgaagctagattattgaagcaagcggaggaattagcaatgcta
cataagaggaaaggagaacatacgcaacaaatagtagatcttaataacaaattgcaggaa
atgacaaaagaccttcaagcaaaggaagctagtcttgcagaaagttcagaagctaatact
aacttacgtttagaaataactaaatgccttggtagagagaaagaattagaagggattaat
cagatgctcaaggatgaacaccaagccttacaacttgcttttgcatctttagaagaaaag
cttagaaaaacacaagaagaaaatcgacagctgattgaacgcttaataaaatataaagcc
agagatgctgaaaagatgaatgaagaaaatgataactttttaagttttacgagtccaaca
gcctttttgatgcataccttgtcaaaatttgggaagagacaagcaaagatgcaaaaggaa
ttggaagatgcagcacgagatacgcgacctgttagtcctgatcgtttaagcttaaaagaa
gttgccggtcttccgacagcagtgccaacgaaagtatccgtaacgtttagtgcccatgag
ggagaagtatacgctgttaaatggtcgcctactgatagaatattggctactggcggtgct
gacaggaaggtgaagctttggaacattactaaaggtacgtcggaaagtaagggcatcctc
gttggcagcaacgccggtgtgatgtcggtggacttcgattcgacaggtacccttattctt
ggagcatccaacgattatgcgagccgcgtctggaccgtcagtgatcttcgcttaaagcat
acactcacgggccactgcgcgaaggtgatggcggcgaagtttctcggcgagccgtcgaaa
gtagttacgggaagttatgatcggaccttaaaaatctgggatctgcgcagcaaagcatgt
atagaaacgaaattcgctggttcaagttgcaacgatctcgtaacttccgacggagctggc
tctacgataattagtggtcattttgatcaaaggatcaggttttgggataccagagccgaa
tccagctcaaatgacattctattggaagggaaagtgacatctttagatttatcccgtgac
gcaaattaccttttgagttgcgtgagggatgacacggtgaaactgattgatttacgaatg
aagaagattgtcggatcgttcagcgctgacggtttcaaagtgggattcgattggacgaga
gccgctttcagtcctgacgggcagtacatagcggtcggttccgcggacggttccgttttc
atctggtctatagcgacgaatatgatcgaaactatactgaaagagcacacggcagcggta
acggccgtgtcttggcatccgcacggcacgtatctggcgtccgtcgatcgcgccaagacg
gtgataatttggggcgaccacgtttga
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