Temnothorax longispinosus: 139824773
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Entry
139824773 CDS
T10889
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tln Temnothorax longispinosus
Pathway
tln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139824773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139824773
03012 Translation factors [BR:
tln03012
]
139824773
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139824773
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139824773
Translation factors [BR:
tln03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139824773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ResIII
NPHP3_N
nSTAND3
AAA_22
AAA_14
ATPase
AAA_19
NACHT
NB-ARC
PhoH
AAA_16
ABC_tran
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
139824773
NCBI-ProteinID:
XP_071653417
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MNLSCLLVFAKMSHRRGFRGMPNSFTRHNRDEQTQSSTSGRGRAYSQAQRPPGLRGKEIG
LYYRNKNLERQKRNAQEVLRLSPRVEQRIKAILNNSKSFYNSSYENCKSEHGNKYHQIHD
TQFKRKFLDIIYGDMQQNIAKAMNVQSKLQRDSDTDRILQNEYREKQRQDAYRAMLKFRS
KLPAYEKKSEILQLVDDNQVVVISGETGCGKTTQVAQFILDDELEAGNGSVTRIVCTQPR
RISAISVAERVAMERAENLGNSVGYQIRLEKTSVREQGSILFCTTGILLQIMKRDPALKS
FSHVILDEIHERTTESDFVMTLLKQIIPKRMDLKVLLMSATLNAESFSAYYNKCPMIHIP
GFTYPVEEFYLEDVLSLVKYRFPDPPLEPIGYRKHLKRYKEQQHKKEEFLNILQPYIRQL
TAEKKYETHVTNQLRNPISEDLSLELIEKLVRYICNTKDPGAILIFLPGMMDISKLNKMM
LDSEHYPSQKYVIYPLHSRMPTVDQKLIFKESPPGVRKIIIATSIAETSITIEDVVYVID
CGKTKFGKFDVKNNIQTLEPEWVSLANAKQRRGRAGRVKSGECYHMYTKAREMTFASYPL
PEMLRTRLEEVILQIKILQLGKVKEFLATVMDPPDLRAIDLSLELLETLNALDKHETLTP
LGYHLAHLPLDPRTGKMILWGALFSCVEPIFAIAASLTFKDAFYCPLGQEEKANEKKLEL
SMEQCSDHIALAEALRRYEIARQRGNARQFCREYFLSFNTLKLLSEMKVQFAQYLYDMKF
LDSENPSYINSNRNSDNIALIKAIVCAGLYPNIAVIRRINKHGVNAWTPEDGSVCIHPSS
VNNKVSRFPSPYLTYFTKQRSTAIFLHDTTCISVPILLFAGSNISIRREKGQYIIRSFSE
DIICERGTGEMIQELQHALNSLLEYKVTNPATVSWSTFEGDLLKGIIELVSQTGPELDFD
NTRQNVYYDEGSTDDNVD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcctgtttgctggtgttcgcaaaaatgtcgcaccgacgcggtttcagaggc
atgccgaactccttcacgcgacacaacagagacgaacaaacacagtcgtctacatccgga
cgtggaagagcgtattcgcaagcacaaagacctcctggactgaggggaaaagaaatagga
ttgtattatagaaacaaaaatttggagagacaaaaaagaaatgctcaagaagtgctcaga
ttatcacctagagtggagcaaagaattaaagctatattaaataattcaaagagcttttac
aattcttcttatgaaaattgcaagtccgagcatggcaacaagtatcatcaaatacacgat
actcaatttaaaagaaaatttttagacattatatatggtgatatgcagcagaatattgct
aaagctatgaatgtgcagtcaaaattgcaaagagatagtgatacagaccgaatattacaa
aatgaatacagagaaaaacagaggcaggacgcttatcgagcgatgttgaaatttcgatca
aagttaccggcatatgaaaaaaaatcagaaatattacaactggttgatgataatcaagtt
gttgttattagtggagaaaccggatgcggcaaaactacacaggttgcacaatttatattg
gatgatgagttagaagctggaaacggtagcgttactcgaatagtttgcacgcagcctaga
aggatctccgctatttccgttgctgaacgtgtagctatggaaagagcagaaaatcttgga
aactctgtcggttatcagatacgacttgaaaaaacttcagtgcgagagcaaggaagtata
ttgttttgtaccactggtatattattacaaattatgaagcgtgatccagcattaaaaagt
ttctctcatgtaatattggatgaaattcacgaacgtaccacagaaagtgattttgtcatg
acattattaaagcaaattattccgaaaagaatggatttaaaagttctcttgatgagtgca
acattgaatgctgaaagcttttcagcatattataacaaatgtccgatgatacatatacca
ggattcacctatccagtagaagaattttatttagaagatgttttatcacttgtgaaatac
agatttcccgatccacccctagaacctataggttacaggaagcacctaaaaagatacaaa
gaacaacaacataaaaaagaagaatttttaaacatattacaaccttatattagacaactt
acagctgagaagaaatatgaaacacatgttactaatcaattacggaatccaattagtgaa
gatctttcattagagctcatagaaaaattagttagatatatctgtaatacaaaagatcct
ggagctattcttatttttttacctggtatgatggatatatcgaaattaaataaaatgatg
ttagactctgaacattatccaagtcaaaaatacgttatctatcctcttcattcacgcatg
ccgacagttgatcaaaaacttatatttaaagaatcacctcctggcgttcgtaaaataatc
attgcgacttcaattgctgaaacgtcaataactatagaagatgttgtgtatgtaatagat
tgtgggaaaacaaaatttggaaaatttgatgtaaaaaataatattcaaactttagagcct
gaatgggtgtctttagctaatgcgaagcaaagacgcggtagggctggcagggttaaaagt
ggagagtgttatcatatgtatacaaaagcacgagaaatgacatttgcttcatatccattg
ccagagatgctgagaacgcgcttagaagaagtaattttgcaaataaaaatcctgcaatta
gggaaagttaaagagttcctagctaccgtcatggatccaccagatttaagagccattgat
ctgtctctcgagttacttgagacactcaatgccctcgacaaacatgagactttaactcct
ttgggttatcacttagcgcacttgccacttgaccctagaacaggaaaaatgattctgtgg
ggcgcattgttttcctgtgtcgagccaatatttgctattgctgctagtctcacatttaaa
gacgctttctattgcccattagggcaagaagaaaaggctaatgaaaaaaagttagaactg
agcatggaacaatgtagcgatcatattgctctcgcagaagctttgagaagatatgaaatt
gcacgtcaaagaggaaatgctcgccagttttgccgagaatatttcctctctttcaatacg
ttgaagctcctctccgaaatgaaagtacaatttgcacagtatctgtatgatatgaagttt
ctagacagcgaaaatccaagttatataaactctaacagaaattcagataacatagcattg
ataaaagccattgtctgtgcaggattatatcctaacatcgctgttataaggcgaattaat
aaacatggggtgaatgcttggacaccggaagacggtagcgtatgtatacatccgtcgagc
gtaaacaataaagtttccaggtttcctagtccatacttgacatatttcacaaaacaacgc
tctactgccatatttttgcatgacactacgtgtataagtgtaccaattttattgttcgcc
ggttcaaatatatcgataagacgagaaaaaggacaatatataattcgttctttttcggaa
gacattatttgtgaacgaggaactggagaaatgatacaggaacttcaacacgctctgaat
agtttattggaatataaggttacgaatccagcaacggtctcttggtcaacctttgaaggg
gacttattaaaaggcattattgaactggtatctcaaacaggtccagaattggattttgat
aacacgcgccaaaacgtatattatgacgaaggttccactgatgataatgtcgattga
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