Temnothorax longispinosus: 139824884
Help
Entry
139824884 CDS
T10889
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tln Temnothorax longispinosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
LRR_13
LRR_LRWD1
LRR_5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
139824884
NCBI-ProteinID:
XP_071653546
LinkDB
All DBs
Position
1:10313303..10321460
Genome browser
AA seq
616 aa
AA seq
DB search
MKKSRKHWTSVSNISTVCLLKTRRNRATSLGDDSLLSLNMKEQDIPEYLEGCGLSACTAS
SDISEDVEFQMMRESKEKKFFTASSLGSSSSSLVDSKKIVMVKHPDSNKPKPTTKRGKPI
RAELDVTKEFVRCREECVKRLDLSKASITNLPSSVKELKHLREFYLYGNKLVTLPPEIGY
LANLETLALNENSLTSLPNTLENLTSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRV
RYVSDNIRNLTNLTMLSFRENKIKELPTGIGELVNLITFDVSHNHLEHLPVEIGKCVQLS
TLDVQHNELLDLPDSIGNLVSLTRLGIRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPD
GLLASLSGLTTITLSRNNFTSYPAGGPAQFANAYSINVEHNQIDKIPYGIFSRSKHLTKL
NMKENQLNALPLDIGSWVTMVELNLGTNQLLKLPDDIQCLQSLEILILSNNQLRRIPTTI
VNLHKLRVLDLEENRIDMLPNEIGLMTELQKLILQSNQITVLPRTIGHLKNLTYLSVGEN
NLSYVPEEVGTLENLDALYLNDNPGLHNLPFELALCKNLNIMDIENCPLSHIPAEILAGG
PSLVIQFLKMQGPYRP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcgcgcaaacactggacgagcgtgagtaacatatcgacggtgtgcctgttg
aagacgaggcgtaatcgcgcgaccagtctcggggacgacagtctgttgagcttaaacatg
aaggagcaggacatacccgagtacctggagggctgcgggctgtcggcctgcacggccagc
agcgacatatccgaggacgtggagtttcagatgatgcgcgagagcaaggagaagaagttc
ttcaccgcgtcgtccctcggcagcagcagcagcagcctggtcgactcgaagaagatcgtc
atggtcaagcatccggactcgaacaagccgaaacccaccaccaagaggggcaagccgatc
cgggcggagctggacgtgaccaaggagtttgttcgctgccgggaggagtgtgtgaagcgg
ctggacctgagcaaggccagcatcacgaatctgccgagttccgtgaaggagctcaagcac
ctgcgggagttctatctctacggcaacaagctggtgaccctgccgcccgagatcggctac
ctggcgaatctggagacgctggcgctgaacgagaactcgctcaccagtctgcccaacact
ctggagaacctgacgtcgctgcgcgtgctggatctcaggcacaacaagctcaacgagatc
ccggacgtggtgtacaagctcacgtcgctcaccacgctcttcctgcgcttcaaccgcgtc
aggtacgtcagcgacaacatacgcaacctgacgaatctcaccatgctgagctttcgggag
aacaagatcaaggaactgcccacggggataggggagctggtcaatctcatcaccttcgac
gtatcgcacaaccacttggagcatctgcccgtggaaattggcaagtgcgtgcagttgtcc
accttggacgtgcagcacaatgagctgctcgacctgccggactcgatcggcaatctggtg
tcgctgacgagactgggtatccgatacaatagattgtcgaatatcccgaaatcgttggcg
aactgtaagatgatggacgagttcagcgtcgagggcaatcaggtgtcgcatctgccggac
ggtttgctggcgagtctgtcgggtctcacgacgatcaccctgtccaggaacaacttcacc
tcatatccagcgggtggcccggctcagtttgcgaatgcctattccatcaacgtcgagcac
aatcagatcgacaagataccctatggcattttctcacggtccaagcacctcacgaagctg
aacatgaaggagaatcagctcaacgccctgccgctggacatcggttcgtgggtgaccatg
gtcgagttgaacctcggcacgaatcagctgctgaagctcccggatgacatacagtgcctg
cagagtctggagatactgatactctccaacaatcagctgagacgtatcccgaccaccata
gtgaatctgcacaagctgcgggtgctcgacctggaggagaaccgcatcgacatgctgccg
aatgagattggcctgatgactgagttgcagaagctgatcctccagtcgaatcagattacc
gtgttgccgcgcacaatcggacacctgaagaacctcacgtatctcagcgtgggtgagaac
aatctgagttacgtgccggaggaggtcggcaccctggagaatcttgatgcgctctacctc
aacgacaacccgggcctgcacaatctgccgttcgagctggcgttgtgcaagaatctcaat
attatggatattgagaactgtccgttgtcacacataccagcggagatattagccggtggc
ccgtcattggtgattcaatttttgaagatgcagggtccctatcgaccgtaa
DBGET
integrated database retrieval system
