KEGG   Temnothorax longispinosus: 139825052
Entry
139825052         CDS       T10889                                 
Symbol
Xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
tln  Temnothorax longispinosus
Pathway
tln03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139825052 (Xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tln03400]
    139825052 (Xrcc1)
DNA repair and recombination proteins [BR:tln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     139825052 (Xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 F5_F8_type_C TraH
Other DBs
NCBI-GeneID: 139825052
NCBI-ProteinID: XP_071653694
LinkDB
Position
1:577627..580385
AA seq 499 aa
MIVKIEKIISCSSEHPLYPAANLLQRNSENWKATWRCSKPGEMLAHVIFQLAEPSYVTGV
DIGNYQSCVVIVTGSTSAEPDNWTVIVNHKFMTNDEAANDKFKDQVQLFTKRELNPDTLK
IKFDRIKVTCMQSANLKVLFGLSYVILRSDSTVDLGLDAFGKFKFKQPCVVKTPMEMMKE
TTLGKAEDTKTDYREELRERIKKNSMENFAKCQEGQKLVRRPLLEKLEAGEADEVFGKRD
KTQPQRLKDQRDNIYDKLFNQSPKNTTNIANEKVVRTPFGDVIPPRNADTNKNNMKDPTQ
SPSTSKKRSLSELENSPSAKHSERKKQRCSECRAGSQDHLCTTCRRLPQPKDIENAHAPS
KTSGNVPAKLKKLKKPFKELFNDVTFSLSGYVNPQRDEIRRKALTMGARYVPDPNTTNKK
CTYLICAFKNTPKYQQFKNHTKIVSHTFIEECFDKKTRFSWRRYALDQKDKLQPESEEEI
DGDRSESVYDMDTDADSDY
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgattgttaaaatcgaaaagataataagctgctcctcggaacatccgctatatcctgcc
gccaatcttcttcaacgtaattccgaaaattggaaagctacgtggcgatgtagcaaacca
ggtgaaatgctggcacacgtcatctttcagctcgctgagccttcctacgttacgggagtc
gatattggcaattatcagagttgcgtcgtcattgtcactggatccacgtccgcggaacct
gacaattggacagttatcgtcaaccacaagttcatgaccaacgatgaagctgcaaatgac
aagtttaaggatcaagttcaattgtttactaaaagagaattaaatccggataccttgaag
atcaaatttgatcgaatcaaagttacctgcatgcaatcggccaatttgaaagtattgttt
ggattatcgtatgtcattttaagatcagattccaccgttgatttaggcttggatgcattt
ggcaagtttaaatttaaacaaccgtgcgtcgtcaagacccccatggaaatgatgaaagaa
acgacccttggcaaagcggaagatacgaagacggattatagggaagaattgcgcgagcga
atcaagaaaaattcgatggagaatttcgccaagtgtcaagagggacagaaacttgtgagg
aggccgttgttagaaaagttggaagctggagaagccgatgaagtttttgggaaacgtgat
aagacccagccgcaacgcctgaaagatcagagagacaatatctatgataagttatttaat
caaagtcccaaaaataccacaaatatagccaatgaaaaagtggtgagaacaccttttgga
gatgttatacctccgcgaaacgccgatactaataaaaataatatgaaagatcctactcaa
agtccttcgacttctaagaaacgttctttaagcgagttggagaattcgccaagtgcaaaa
cacagtgaaagaaagaaacaaaggtgctccgaatgtcgcgcaggctcgcaagatcacctg
tgtacgacttgtcgacgattgccacagcccaaagacatcgagaatgctcatgctccttcg
aaaacaagcggcaacgttcctgcaaaactgaagaaactgaaaaaaccgtttaaagaactg
ttcaacgacgttacattctccctcagcggctacgtcaatccacagagagacgaaattaga
agaaaggctcttactatgggtgccagatatgttcctgatccaaatacaactaataaaaaa
tgcacttatttgatatgtgcttttaaaaatactccaaaataccaacagttcaaaaatcac
acgaaaattgtttctcatactttcatcgaggaatgttttgataaaaaaacgagattttct
tggaggcgatacgctttagaccaaaaagataaattgcagcccgagagcgaagaagaaatt
gatggtgatcgatcggaatctgtatatgatatggacaccgatgccgattcagattattaa

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