Temnothorax longispinosus: 139825333
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Entry
139825333 CDS
T10889
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139825333
03036 Chromosome and associated proteins [BR:
tln03036
]
139825333
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139825333
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
139825333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
HHH_3
HHH_9
SH2
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
139825333
NCBI-ProteinID:
XP_071654084
LinkDB
All DBs
Position
2:3158623..3167965
Genome browser
AA seq
1776 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKKKLRKLKAVEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSNHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLERKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDERDIITEDERRSERSHRPEAETFEEGSDEGEYTDA
DDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEE
DEYLDEDIDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEVRNTDIPERMQ
LRSVPVTPVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTVGKIKK
ALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYRFDAKWCQLRQRKENLLKLFEKMR
NYQLDEIMKNPDAPLPDNVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHEIPAMQEA
VRRKERQARREERIQRRKQQIAEAEENGEDPPEEEEVLEEEEVDDTLKQAVRSGPYSICR
KAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIAIDYYNSRFATTEEVLKAA
QLMVALQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYTMKYLKDKPVRDL
VGVQFLNLMIAEEDKLITITLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRIGS
VEIALNRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYSCEFPEEEDEEWDT
SKGLRVMGLAYVPDYSQAAFTCLVAADGECTDHLRLPHLMKRKNSYREDEKMMKEADLLA
LRNFIATKKPHVIVVAGESREAMMIAADLKECITHLTEEEQFPSIQVEICDNELAKIYSN
SNKGTSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHSLQDQLPKEELL
ENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRT
QLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALE
YDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDL
RVPYQSPSAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGEQLDQANPVRNEETGL
WQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCE
RVGMGQIIHCRIIKIEVDRFSVECTSKSSDLSDKNHEWRPQRDPFYDTETEQKDIKVEED
AKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTD
DILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKPN
VEGIKDKAEDILKEQKKENPGGIPYIISAAKTYPGKFLLSYLPRTRCRHEFVTVTSEGFR
FRAQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTTPGTVSGMNQEAIQR
VAQNLPHHMLHSLSQVANQTPHHYPPHTPGAASATGYGGVHTYPNTPYTPSGQTPFMTPY
QTPHHTPHHGQPTPRYGQQTPSHHQGPFVHPPPPSMTPSHHRSAQSHRPTPPLSTPSGDP
TDWKGDPTDWKKAAEDWAARIKSGSRVSGSTPRYEESRRTPRNYDEPVGRTTPSGRSRPS
STRTPSYRSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctcgactccgaggcggacgtgagcgagggtgaggaggagctggaccaa
aatgagaagaagaagctgcgaaagctgaaggcggtggaggagagcgacgacgaggaggaa
gatgatgaggatcagttgcgcgaggaactgaaagatttgatagacgacaatcctatagaa
gaaagcgagggtgaagacagtgacggttctaatcatcataagaagcgtaagaagagtgac
gatgaggatttcgatgatcgcttggaagatgaagattatgatctgattgaagaaaattta
ggcgttaagcttgaaagaaagcgtttcaaacgtcttcgaagaatccaagatgaggagtca
gaggaagaacaagaaaaggaagcagatgaagaaagggacgccattgccaatgaattgttt
gaaggttccggagacgaaagagatattattacggaggacgaaagacgaagtgaacggagt
cataggccagaggcggaaaccttcgaggaaggcagtgacgaaggagagtacactgatgcg
gatgattttattgttgacgacgatggtaggcctatcgcggagaaaagaaagaagaagaag
ccaatattttctgatgcggcattgcaagaagcacaggacattttcggcgttgattttgat
tatgatgaattcggtaaatatggcgaggaggattatgaggaggaagaggaagaagaagaa
gatgaatatttggatgaagacatcgataccgaacggccacgaagaccgaagaagcagctg
aagaaaaagaccacgagaaagagtatcttcgagatttacgagcctagcgaattgaaacgc
ggtcactttactgatatggacaacgaggtacgtaacacagatataccagaaagaatgcaa
cttcggtctgtaccggtcactccagttccggaaggttccgatgagttggatctcgaagca
gaatggatctacaagcaggcgttttgcaagcctacaatttctattcaggatgctcacttg
aatgccgaggctaaggaacgggcacggaaaggaccacagaccgtcggcaaaatcaagaaa
gccttggacttcatgcgcaatcaacacttcgaagtcccttttatatccttctacaggaag
gagtacgtgctgcccgagctgaacattaatgacctgtggaaggtttatagatttgacgcg
aaatggtgccagttgcgccaacggaaggagaacttgctcaagctatttgagaagatgcgc
aactaccaactggatgaaattatgaagaatccagacgcgccgctgccagataacgtacga
gtgattaaagacgacgacattgagcgactgaagaacgtgcagacaagtgaagaactcaac
gatgtctacaatcactttatgctgtattacagccacgagatcccggcgatgcaggaggcc
gtgcgacgaaaggagaggcaggcacgacgcgaagagaggatccagcgacgtaaacaacag
attgctgaggcggaagaaaacggagaggatccaccggaggaggaagaggtgctggaggaa
gaagaggtcgacgacacgctgaagcaagccgttagaagcggcccgtactcgatctgtcgg
aaggccggattggacggtctggcgaaaaagtttggcttaacacccgaacattatgccgag
aatctacgtgacaattatcagcgtcacgaagtggatcaggagccgaccgaaccgacgaca
atcgcgatcgattattacaactcgcgattcgcgaccacggaagaagttctgaaggctgct
cagttgatggtagcgcttcagttggcgcgcgagccactcgtgcgcaaatgcgtgcgcgag
atgtacatggaacgcgctaagatatcagtgaagccaacaaagaaaggcattaaagagatc
gacgagaaccatccgatatacacgatgaaatacttgaaggacaagccggtgcgcgatctc
gtaggcgttcagtttttgaatctgatgatcgccgaggaggacaagctcatcacgattacg
ctcagcgacagcatcgagggcaacaccagcagcaactacgtcgacgagatgaagcagctt
tattgccgagacgagttcagcaaactcgtgcaggactggaacgccttgcgcataggcagc
gtcgagatcgcgctcaatcgcatggtgataccgcatctgaagaaggagctacgcacgaat
ctaatcgccgaggcgaaggagtgcgtgatgcgcgcgtgttgccgcaaaatgtacaactgg
atcaaagttgcgccgtacagctgcgagtttcccgaggaagaggacgaggaatgggacact
agtaaaggcctgcgcgtcatgggcttggcctatgtgcccgattactcgcaggcagctttc
acctgtttggtcgcggccgacggcgagtgtacggatcacctacgcctgccgcatttaatg
aagcgcaagaacagttatcgcgaggacgagaagatgatgaaagaggccgatctactggcg
ctgagaaacttcatagccacaaagaagccacacgtgatcgtggtggccggcgagtcccgg
gaggcaatgatgatcgctgccgaccttaaggagtgcatcactcatctgacggaggaggag
cagtttcccagtatccaggtagagatatgcgacaacgagcttgccaagatttattccaac
agtaataagggtacctcggagttccgggattatccggagctgctgcgtcaggctatctcg
cttgcgagaaggatgcaggatccgctggtggagttctcgcaattgtgcacggctgacgag
gagattctctgcctcaagtatcacagtttgcaggatcagttgcccaaggaagagctgctg
gaaaacctgtatctggagttcgtcaatcgcgtgaacgaggttggcgtagacgttaataag
gcggtccaacaggcatactgcggcaaccttgttcaatttgtttgcggtcttggcccgcga
aagggccaggcattgatcaagatgttgaagcagacaaatcagcggttggagaacaggaca
cagttagttactgcatgtcatatggggccgaaggtattcattaattgcgctggcttcatc
aaaatcgacaccaatagcctgggcgacagtaccgaggcgtatgtcgaggtgcttgacggt
tcgcgcgtacatcccgaaacttatgaatgggccagaaagatggcagtcgacgctctggaa
tatgacgatgaggacgccaatcctgccggtgctttggaggagattctcgagtcgcccgaa
cgcctaaaggacttggatctcgacgcttttgcggaggaactcgagcggcagggtttcggc
aacaagtgcgtcactctctacgatattagggccgagttgaatagtcggtacaaagatctc
cgtgtgccatatcaatcgccgagcgcggagaagctgttcgatgttctgacgaaggagaca
cctgagaccttctacgtcggcaagctagtgctggccaccgtggtcggtatcagtcatcga
aaaccacagggcgaacagcttgatcaggcgaatccggtgcgaaacgaagagaccggtctg
tggcagtgtccgttctgcctgaagaacgattttcccgaattgtcggaggtatggaatcac
tttgatgctggcgcttgtccaggcaaggccaccggagtgagattgcgactggacaatggt
atctctggttatattcacatcaagaatctgtcggaccgacacgtcgcaaatccctgcgag
agagtcggtatgggccagatcattcattgccggattattaaaatcgaggtagatcgattc
agcgtcgagtgtaccagtaagagcagcgatctctctgataagaatcatgaatggaggccg
caacgggatccattttatgatactgagaccgagcaaaaggacataaaggtagaagaggac
gcaaagaaagcaaaacagcggcaaatctacgtgaaacgcgtaatcgtccatccgtccttc
cacaatattagtttcgccgagactgtaaaattaatgcagacaatgaagcagggtgaagca
atagtgagaccgagcagcaagggtgccgaccacttgacagtcacgtggaaagtcaccgat
gacattctgcagcatattgacgtccgcgaggagggtaaggagaacgctttctcattgggg
cagagcttatggatcggcaacgaggagttcgaggatttggatgagatcatcgctcgacat
gtgaatcccatggccgcttacgcctccgaattattggacttcaaatactacaagcccaac
gtggagggaatcaaagacaaagcagaggatatactgaaggaacagaagaaggaaaatcct
ggtggaattccctacatcatatcggcagctaagacctatcctggaaagttcctactctcg
tatctgccgcgtactcgctgtcgccacgagttcgttacagtgacatccgagggcttcaga
tttcgagcgcagatgttcggtagggtgagcgatctactacgctggttcaaggaacacttt
agggatcccgtccctggacaatccactccgagtacaccacgcggcgcgatgacttctagg
acaccttacactactacgccaggaacagttagcggaatgaatcaagaagcaatacagcga
gttgcacagaacctcccacatcacatgttgcactcgctatcgcaagtggcgaatcagacg
ccgcatcactatccgccacacacacccggagcggctagcgctaccggctacggcggagta
cacacgtatcccaacacgccgtatacgccgtctggtcaaactccgtttatgaccccgtac
cagacgcctcatcacactccgcatcatggccagcctactcccagatacggccaacaaacc
cctagccatcatcaagggcccttcgtgcacccgccgccgccctcgatgacacccagccat
cacaggtctgctcaatcgcacagacctacaccacctctgtccactccttccggcgacccg
acggattggaagggcgacccgacggattggaagaaggccgccgaggattgggcagcacgt
ataaaaagcggttcgcgagtctccggatcgacgcccaggtacgaggagtctagaagaact
ccgcgtaactatgacgagccggtcggcagaacaacgccctccggaaggagcagaccttcg
tctacgcgtactccgtcgtacagatctccgcgaggcaccccacatacaaattctagtcca
cgaagtatgtcgctcagcggagacggtactcctctgtacgacgagagctaa
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integrated database retrieval system
