KEGG   Thiothrix litoralis: J9253_00955
Entry
J9253_00955       CDS       T07754                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
tlo  Thiothrix litoralis
Brite
KEGG Orthology (KO) [BR:tlo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tlo02044]
    J9253_00955 (sctD)
Secretion system [BR:tlo02044]
 Type III secretion system
  Type III secretion core apparatus
   J9253_00955 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C Yop-YscD_ppl_2nd Yop-YscD_ppl_1st FHA Yop-YscD_ppl_3rd T2SSB T2SSC
Other DBs
NCBI-ProteinID: QTR46561
LinkDB
Position
190006..191364
AA seq 452 aa
MAIQQTSFVLKVLNGINAGASVRLKTGSLVIGRSMTCDIILHDENIADQHIQLLITSGSI
TLQPLARPVFVGGAEVTAESLELVPYQPVRLGNVEFWVTDSRVAPPPSSNKPSESKVHQK
RARPAESSAAPSAESPKKPVKAVDAGASGKKKGGSGVGWLAMGVGILLLANLLYWAPQFN
RVLENLGVRDSGEQQAANLMQELGKQDFTLVNEADGSVSLSGYTNTVLERNDLMSRMQSA
GIKANLHIWSQDEMAESAAMIARAMGQPALHFKSGDTDGVLVAQGFVSKSADWERVKATI
LSDVGGIRSIGEGEFQTMDGYLASFVQFIQKKGLSSRIHATTDGKSVIVNGELTQPEIEQ
LKGFRKEFIDLQGEGPAIVLKVTDVRDRIKLSIRSVSVGEVPFMVAKDGKKYMEGSALGE
KYFVKSIKPDHVVLTNNGIDIPFYYGIEKGER
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcaattcaacaaacttcgtttgtactcaaggttctcaacgggattaatgcgggcgca
tctgtccgcttgaaaacgggtagcttggtcattggtcgctccatgacctgcgatattatt
ttacatgatgaaaatattgccgatcagcatatccagttactgattacctccggcagcatt
acccttcagcccttggcgcgacctgtgtttgtggggggggcggaggtaacggctgaaagc
cttgagctggttccctatcagccggtcagattgggtaatgtcgagttttgggtgacagat
agccgagtggctcctcctccaagcagtaacaagccttccgaaagcaaggttcaccagaaa
cgggcgcggcctgctgaatcatctgctgcaccttccgctgaatcccctaagaagcctgta
aaggcggttgatgccggtgcatccgggaagaagaagggtggaagtggggttgggtggcta
gctatgggggtggggatactcttgcttgccaatctgttgtattgggcaccccagttcaac
cgtgtgctggaaaacctgggggtacgtgattccggggaacaacaggctgccaacctgatg
caggagttgggcaaacaggacttcacgctggtgaatgaggctgatggttcagttagcttg
agtggctataccaacacggtgttggagcgcaatgacctgatgagcagaatgcagagtgcc
gggatcaaggctaatctacacatctggtcacaggatgagatggctgagagtgccgctatg
attgcacgagccatggggcaacccgctcttcacttcaagtcaggggataccgacggcgta
ttggttgcgcagggattcgtgagtaagtcagcagattgggagcgggtcaaggctacgatc
ctcagcgatgtcgggggtatccgctctattggtgagggtgagtttcagacgatggacggc
tatttggcttcgtttgtgcagttcatccagaaaaaagggctttctagccgtatccatgca
acaactgatggcaagagcgttatagtcaacggcgagttaacccaacctgaaatcgaacag
ttaaaaggttttcggaaagaattcattgatcttcagggagagggaccggccattgtgctg
aaagttactgacgtgcgggatcgtatcaaattgtctatccgcagcgttagtgttggcgaa
gtaccctttatggtcgctaaagatggcaaaaagtatatggaaggttcggcacttggcgag
aaatattttgttaagtcaatcaagccggatcatgtggtattgacgaataatgggatagat
attcctttttattacggtattgaaaaaggggagagataa

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