Thiothrix litoralis: J9253_01595
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Entry
J9253_01595 CDS
T07754
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tlo
Thiothrix litoralis
Pathway
tlo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J9253_01595 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlo03400
]
J9253_01595 (ung)
Enzymes [BR:
tlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J9253_01595 (ung)
DNA repair and recombination proteins [BR:
tlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J9253_01595 (ung)
Prokaryotic type
J9253_01595 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
QTR46678
LinkDB
All DBs
Position
complement(312033..312704)
Genome browser
AA seq
223 aa
AA seq
DB search
MKNMHTTWQSALAAEFTQPYWQTLQGFLAREQAAGKTLLPPQAMRFNALQATALDKVKVV
ILGQDPYPTLGHAHGLSFSVLPDVKPLPRSLQNINKELLEDVGVDNRQTGCLQAWANQGV
LLLNTVLSVEVGQAGSHQKRGWERFTDAVIQAVNQQTQPVVFVLWGGHAQKKAALIDESR
HLIIQSAHPSPLSARRGFFGSKPFSRANVFLQAEGREGINWQL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatgcataccacttggcagtcagcccttgccgctgaatttacccaaccttac
tggcaaaccttgcagggcttccttgcacgcgaacaagcagcgggaaaaaccctcctgccg
ccgcaagcaatgcgtttcaatgccttgcaagccaccgcgctggacaaggtgaaggtggtt
attttggggcaagatccctacccgactctgggtcatgcacacggcttgtcgttttcagtg
ttaccagacgtgaagcccttgccgcgctccttgcagaacattaacaaggagttgctggag
gatgtgggtgtggacaatcgccagacaggttgcctgcaagcatgggcaaatcagggcgtg
ttactgctgaataccgtgctgtcggtcgaagtaggtcaggcaggcagtcaccagaaacga
ggttgggaacgttttaccgatgcggtgattcaagcggttaaccaacaaacgcagccggtg
gtatttgtgctgtggggcggtcatgcgcagaaaaaggcggcattgattgacgagtcccgt
cacttaattattcagagcgctcacccatcaccactgtcggcacggcgcggcttttttggt
agcaagccattttcgcgggcgaatgtgtttttgcaggctgagggacgtgaggggattaac
tggcagttgtga
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